similar to: Model Comparison in Canonical Correlation Analysis

Dear all, I didn't find any graphical solution in the package "mva" to plot the canonical scores from a CCA (canonical correlation analysis). Does anybody knows how to plot or has anybody already programmed : - the map of the canonical scores, - the graph of the canonical weights, - the correlation circle i.e. the canonical loadings ? Thank you for help ...

Dear Sir/Madam, This is Animesh working on Canonical Correlation Analysis ( CCA ) and I am using CCA package in R. I have a doubt and it may be very basic question. Hope someone will get back to me with answer. I am trying to follow the documentation of CCA but could not make out some of the stuffs. 1) I simulated some of the data sets and got the result. I want to

R-ecologists: Anyone wanting to create a Krebs package for R can do so using the C-source code avalaible at: ftp://gause.biology.ualberta.ca/pub/jbrzusto/krebs/source.zip Barry J. Cooke Current mailing address: Ph.D. Candidate 3971 NW 23 Circle Environmental Biology and Ecology Gainesville, Florida, USA Department of Biological Sciences 32605

Hi, from what I understand about the canonical correlation function 'cancor', it looks for correlations in two sets of variables, each represented in matrix form. Right? Sounds exactly like what I need. I have tried the following but I am not sure how to interpret the results. AudioPCs <- c(ArTHarF0PCA$x[,2], ArTHarF1PCA$x[,2], ArTHarF2PCA$x[,2], ArTHarF3PCA$x[,2],

Dear R, I recently did a canonical correlation analysis on two subsets of data (location and weather). So I now have canonical scores for location and weather. but I'd now like to do a scatterplot matrix using the pairs statement. Is there a way to somehow join location.U and weather.V to become a new data set from which I could undertake a scatterplot matrix of the canonical variates?

Dear List, I would like to obtain biplot containing arrows and variable labels. However, after checking the previous message and package CCA and function anacor, my attempt remains an open question. Please kindly advise code or package I might miss to achieve it. Thank you. Elaine [[alternative HTML version deleted]]

Hello everybody ! I try to obtain in R eigenvectors and canonical analysis on MANOVA results, but I don't find how to process? In particular, I would be interesting to obtain "standardized canonical coefficients" of the canonical variates. There analysis give some information on the correlation between response variates. My data are organised in 2 terms (one is continu, one is a

Has anyone authored a Nonparametric approach to Canonical Correlation?

I've been asked about "Canonical Variance Analysis" (CVA). I don't see any reference to it searching the R site. Does it go by other names? Genstat describes it thus: Canonical variates analysis operates on a within-group sums of squares and products matrix, calculated from a set of variates and factor that specifies the grouping of units. It finds linear combinations of the

http://www.cuddyvalley.org/psychoR/code now contains version 1.4 of ca.R There are already many versions of CA and CCA in various R packages, but this one has some unique features, so maybe it is useful. The function ca() can do simple CA, but it also allows for linear restrictions on the row and column scores (they can be restricted to be in the span of a number of covariates). Thus the

Hi Guys, First, English is not my native language so sorry if the question is too difficult to understand. I can rephrase it if necessary. I have 32-bit Windows Xp SP3, i use R version 2.12.0 (2010-10-15), and the question is about Redundancy canonical analysis? plot problem in 3D using VEGAN, RGL, SCATTERPLOT3D and SFSMISC. I noticed the following? code to explain as clearly as possible the

Dear list, I'm trying to compare two sets of variables using canonical analysis. My X variables include 3 climate indices, all continuous. My Y variables describe a set of 3 environmental moisture measurements. However, I would also like to include a class variable for habitat type. My colleaugue was able to do this in SAS, but we could not find a way to do it in R. Is anyone familiar

I think i mentioned this in private communication a while back, but in case anyone else cares: I have a version of canonical correspondence analysis (CCA) coded up in R. I based it on Ter Braak and Prentice (1988) Adv. Ecol. Res. 18:271-317, Ter Braak (1986) Ecol. 67(5):1167-1179, and Ter Braak (1995) Section 5.9 in Jongman, Ter Braak, and van Tongeren "Data Analysis in

Dear R users: Could you please help me out how to use R to get and interpret Standardized discriminant functions and structure coefficients for sex, Degree_Program, and Enrol_USM Please find the data file at: http://www.usm.maine.edu/~aaboueissa/Rhelps/Rhelps.html data files are (xls file: dataforRxls or txt file: dataforRtxt) Output looks like this table. Standardized

We need to keep the discussion on the list. When I run your code, there are several problems. strain.data <- read.xlsx("Dee rhiz.xlsx", sheetName ="strain", header = T, row.names = 1) str(strain.data) # lists 9 columns at the end with all NAs strain.data1 <- (strain.data, sqrt.dist = TRUE) # this is not a valid R line. I get Error: unexpected ',' in

>>>>> Ross Ihaka writes: > I have got a little side-tracked (from graphics) and am putting > together a little multivariate analysis library. This is just > intended to be a "core" library rather than anything exhaustive. > Mainly it is a matter of putting togther code which already exists at > StatLib. Here is my present list (only some of which is

Dear Ioannis Thank you very much for pointing me to meta-analysis. Although it may not solve my problem with the normalization, it gives me some other options to display the different correlation coefficients. One possibility is the use of Funnel plots, which are even available in library(rmeta). Another possibility is the use of forest-plots, as implemented in rmeta as metaplot. Sorrowly,

Hi, Does anybody know some package or function that computes canonical variates? Luis & Janete -------------------------------------------- sapo.pt/kitadsl -.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.-.- r-help mailing list -- Read http://www.ci.tuwien.ac.at/~hornik/R/R-FAQ.html Send "info", "help", or "[un]subscribe" (in the

This is the patch I tested which works (on top of the patch posted): diff --git a/lib/canonical-name.c b/lib/canonical-name.c index e0c7918b4..ae4def692 100644 --- a/lib/canonical-name.c +++ b/lib/canonical-name.c @@ -53,8 +53,16 @@ guestfs_impl_canonical_device_name (guestfs_h *g, const char *device) * BitLocker-encrypted volume, so simply return the original * name in that case.

On Fri, Oct 09, 2020 at 11:37:41AM +0100, Richard W.M. Jones wrote: > On Fri, Oct 09, 2020 at 11:33:43AM +0100, Richard W.M. Jones wrote: > > > > This is the patch I tested which works (on top of the > > patch posted): > > > > diff --git a/lib/canonical-name.c b/lib/canonical-name.c > > index e0c7918b4..ae4def692 100644 > > --- a/lib/canonical-name.c