similar to: 'system' command through Rserve

Dear all, I'm trying to use R-functions from Java. I want to use the Package Rserve. Everthing is installed and I can run my Java-testprogramm. ... Rconnection r = new Rconnection(); double[] d = r.eval("rnorm(10)").asDoubleArray(); ... But now I get always arrays with ten "0.0", which is not correct I suppose, that is is a problem from R, because at the fist time (last

REXP has an asBytes() method. Will this capture the output of an R plot function if a proper graphics device is used? It appears R insists on sending plot output to a file. Kind of strange since it insists on loading all your data into memory before it can do anything. If so then does anyone know what this would be? I prefer png or jpeg. Example: c is an RConnection REXP r =

Hello, I want to import R-output via Rserve to Java, especially for the function ctree from the package party. Rserve is working properly. Yet, I only get the predictions with the Java code try{ RConnection c = new RConnection(); ... c.voidEval("modell <- ctree(...)"); REXP y = c.eval("nodes(modell,1)[[1]]$prediction"); ...

Hi I am using Rserve for R2.3.1. every time after I load Biobase library, a new Graphics window frame pops up. Could any onw know how can avoid it. Best Saeede class testReserve { public static void main(String[] args) { RServeConnection rsCon = null; Rconnection c = null; Process proc = null; try { Runtime rt = Runtime.getRuntime(); proc

I need to input a txt, or xls, file from a client to R, using RServe. >From what I've been reading, the best way to do this, is using the 'createReference' method, from REngine package. But I couldn't find any documents exemplifying it's use. I got to upload a file from java? And then? How do i refeer the file to this method? Best Regards, J. Daniel -- View this message

Hello everyone, I have been attempting to make use of the newly implemented detachedEval functionality and I am having a few teething issues. My code works fine when tested with both the Client and the Server on a single machine, but issues arise when I run them separately.Possibly because the local / local connection is running voer a Unix socket rather than tcp proper? Rsession*

Hi all, Using RConsole, it's easy to get data from the database that you can use in an R Command. Like this: (Reference case) irisQuery <- dbGetQuery(conn, "select * from iris") boxM(irisQuery [,-5], irisQuery[,5]) ---- (Actual case this posting is about) Yet, if I'm getting that same (sample IRIS) data, say, in a web service possibly POSTED from a SQL command, that same

Hi, I am facing one problem of fetching R warning messages in Java Code using Rserve. It is easier to trap R Error messages by using catching RSrvException. I came to know one way of fetching R Warning messages, i.e. using "withCallingHandlers", below is my Java Program, which uses withCallingHandlers of R : import org.rosuda.JRclient.*;

That's amazing! Thank you!!! One follow up question, if that's OK? If, instead of using hard-coded CSV, I read the CSV into a variable first, then it fails again with a parse error. Code below. So, if I read the CSV into a variable, do I need an additional wrapper method? Seems like it should still work. Thanks in advance for your reply. -M String inputIris =

We had something similar, and as far as I recall the problem turned out to be that we had not set the config file to allow remote connections. This would probably be better put on the Rosuda mailing list: http://mailman.rz.uni-augsburg.de/mailman/listinfo/stats-rosuda-devel Hope this helps, Matt Wiener -----Original Message----- From: r-help-bounces at stat.math.ethz.ch [mailto:r-help-bounces

Hello, We are facing some problem while calling a Rserve API from our Java client. The details are as below: 1) We have installed Rserve on linux machine "Nagarajan"(Port: 6311) and related modules. 2) We have started the Rserve in daemon mode perfectly by executing the comman " R CMD Rserve" on the linux machine. But when the Java client executes the statement:

Hi, I want to run the R-function ctree (package party) from Java over Rserve with the following Java-Code: try{ RConnection v = new RConnection(); v.voidEval("library(party)"); v.voidEval("try(load(\"C:\\Documents and Settings\\daten2.rda\"))"); v.voidEval("try(pdf(\"C:\\Documents and Settings\\test4.pdf\"))"); v.voidEval("plot

Hi all, We're using Rserve and RandomForest to do classification from within a Java program. The total is about 4 lines of R code: library('randomForest') x y future fit<-randomForest(x,y,no.action=na.roughfix,importance=T,proximity=T) p<-predict(fit, future) What is very frustrating is that we have tried this two different ways (both work in R): 1. Load x, y, and future

It can't be this hard, right? I really need a shove in the right direction here. Been spinning wheels for three days. Cannot get past the errors. I'm doing something wrong, obviously, since I can easily compute the Box's M right there in RStudio But I don't see what is wrong below with the coding equivalent. The entire code snippet is below. The code fails below on the call to

I'm not sure what you mean. Could you please be more specific? If I print the string, I get: boxM(boxMVariable[, -5], boxMVariable[, 5]) From this code: . . . // assign the data to a variable.rConnection.assign("boxMVariable", myDf); // create a string command with that variable name.String boxVariable = "boxM(boxMVariable[, -5], boxMVariable[, 5])";

Thought I'd try and start a discussion. Feel free to jump in. I guess R needs to strike the right balance between opening up the internals to package writers and not allowing them to do bad things. My first attempt at cracking this nut is to just memcpy() the Rconnection and not allow access to the private stuff: /* Alternative to allowing C code access to connection API. */ Rconnection

Hi all, first of all: Sorry for my bad englis, and now the Question: I have some problems with running R from Java. First i tried using rJava (JRI). But the examples didnt work properly. Now im trying to establish a connection by using Rserve and JRclient (RF503). I have the following code, which i`ve found: ------------------------------------------------------------------------ public

I realize the communication between R and Java with Rserve in my dissertation, but i can not run the Rserve by double click of Rserve.exe, and also i can't realize backstage running of Rserve by technique of Multi-thread in Java. Can anyone tell me why? So, before i run the Java, i must run the R manually, then input "Rserve()" or "system("Rserve")". This

Hi I get this error with Rserve: eval failedeval failed, request status: R parser: syntax erroreval failed, request status: R parser: input incompleteorg.rosuda.REngine.Rserve.RserveException: eval failed at org.rosuda.REngine.Rserve.RConnection.eval(RConnection.java:233) at se.ucr.qrep.RGenerator.generateReport(RGenerator.java:45) Anyone know what it could mean? -- View this message in

Thanks! I just figured it out (thanks to "Beyond Compare") and was coming here to post back. The boxM test doesn't work with that (now, finally working) REXP structure, but I probably now need to create a table or something and parse that structure. So much fun! :) Thanks again. - M Sent from [ProtonMail](https://protonmail.com), Swiss-based encrypted email. > --------