similar to: writing the plots

hi I have vector test. It has 3 elements. I want to join the three into one vector. "Geneset=HSA04910_INSULIN_SIGNALING_PATHWAY-157- 20". how can i do it. > class(test) [1] "character" > test [1] "Geneset=HSA04910_INSULIN_SIGNALING_PATHWAY" "157" [3] "20" Ramya --

Dear Sir/Madam, I found your email address and your correspondence with R-users. I hope you could help me with this question about the function "ur.ers" in the package of "urca". It is an improved unit root test (Elliott et al. 1996 Econometrica). Do you know how to extract the value of the test statistic from the output? The only thing I can get is the print-out of all

hi I want to compare two list by its names and get the values of that list. can anybody let me know the syntax of comparing the list by their names using a for loop c.genes<- list() for(i in 1:100) c.genes[[1]]<- geneset(which(geneset == tobecampared[i])) } here geneset is a list and also tobecampared is a list Thank you Ramya -- View this message in context:

Hi, Could you please let me know to use a list in a for loop here geneset is a loop.I am trying to match the names of the list with 1st row of the output. result<- list() for(i in 1:length(output) { result[[i]] <- geneset(which(geneset %n% output[,1])) } Kindly help me out -- View this message in context: http://www.nabble.com/For-loop-tp18163665p18163665.html Sent from the R

Geneset_name #Chromosome #Hit_in_Biomart original_geneset_len Missing.genes [1,] "AGUIRRE_PANCREAS_CHR12" "1" "51" "59" "8" [3,] "AGUIRRE_PANCREAS_CHR9" "1" "24" "24"

I have a dataframe D.F1 >dim (D.F1) 14351 9 This dataframe has values and for some 1000 rows it holds NULL values.I hace found the missing values for about 500 and have those in another dataframe D.F.sub.2 >dim(D.F.sub.2) 500 9 as dataframe is a subset of D.F1 the coulmn 1 in D.F.sub.2 is a subset of D.F1.I have to insert the values in D.F1 in other fields while the coulmn 1 in both

Hi there I have two object on is a vector T and the other is dataframe C. vector T has more no of rows when comapred with a dataframe Ccolumn[,2].I want to find the the missing rows in dataframe C.That is those values that are not matchig in dataframe C[,2] Kindly give me suggestion on how to go about it. Ramya -- View this message in context:

hi there, Is there any function to append the pdf file. I want to write in a pdf file some 100 plots(in one single pdf containing 100 plots) while all the plot are created using a for loop. I can create 100 pdf one for each for each plot using a for loop but i want only one pdf with 100 plots. Ramya -- View this message in context:

Hi, I have a list(A1) of dataframe and a vector containing a 22 list names. list(A1) abc l m n p q r dce e g h l k m kpo a d c also i have a vector of list names. abc,dce similarly i have 22 elements. I wanna delete or want a list without the list elements whoes name match up the vector. my result should be kpo a d c. i tried lapply it is in working in the way i want. Kindly help me

hi, I need to remove the list that does not have any values.Do suggest me the way to do it. result<- list() > head(result) [[1]] [,1] [,2] [,3] [[2]] [,1] [,2] [,3] [[3]] [,1] [,2] [,3] [[4]] [,1] [,2] [,3] [[5]] [,1] [,2] [,3] [1,] "HIGD1C" "SNP_A-2058537" "4" [2,] "HIGD1C" "SNP_A-1955347"

Hi, I have a dataframe with 14319rows and 9 colums. for some rows there are null values.I want a dataframe without these null values.I wanna select only those that have values !=NA. kindly let me know how to do that. Ramya -- View this message in context: http://www.nabble.com/selecting-dataframe-values-that-are-not-nulls-tp19537093p19537093.html Sent from the R help mailing list archive at

hi there, I have a list of list objects i need to remove the top layer [[1]] [1].0 "ABC" "DEF""LMN" [1].1 "WER" "ERT" "TRY" [[2]] [2].0 "ASD","wer""qwe" [2].1 "wdv""ghj""ggj" I wanna avoid the top layer...that is [[1]] [[2]] shouldnt be there just a simple list is wat i need.

hi, I have list of length 5453 and vector of length 14318.I need to compare the vector with the list and return the list name if matched.I am thinking of using an lapply but how to retrive the listname is wat i am puzzled abt. kindly let me know how to go abt it. Ramya -- View this message in context:

Hi there, I have a dataframe length.unique.info > length.unique.info abc 12 345 def 16 550 lmn 6 600 I want those names that fall under the condition (length.unique.info[,2][i] <=5 && length.unique.info[,3][i] >=500) abcder<-length.unique.info[which(length.unique.info[,2][i] <=5 && length.unique.info[,3][i] >= 500),1] will "&&" look for

hi, I have a data stored in table format. The data is stored in the name map. 500545 rows and 3 columns. I want to use a for loop to scan through till the end of the row. can i use like this. for ( i in 1:row(map) { } Kindly clarify me Cheers Ramya -- View this message in context: http://www.nabble.com/R-help-on-for-loop-tp18098661p18098661.html Sent from the R help mailing list archive

hi there I have a dataframe abc 123 345 abc 345 456 lmn 567 345 hkl 568 535 lmn 096 456 lmn 768 094 i want the uniques of column 1 and there corresponsing column 2 and 3 output abc 123 345 lmn 567 345 hkl 568 535 cbind(DF1[,1],DF1[which(unique(DF1[,1]),c(2,3)]) but didnt work kindly let me know how to go abt it ramya -- View this message in context:

hi I have list of matrix of lenggth 61 containg the mean values..I want to make a boxplot for each of the matrix. I used a for loop but i cant figure out the way to save in the boxplots > all.the.mean [[1]] mean 0.5 o.6 0.8 [[2]] 0.6 0.6 0.9 now i want the boxplot for each of the matrix in a seperate window.my code for(i in 1:length(all.the.mean) { windows() boxplot(all.the.mean[[i]] } this

Hi There, I have a named List object.I want to access all the list elements that has the same name for example The List test <- list() $d2 v1 v2 v3 v4 1 2 3 4 5 $d2 v1 v2 v3 v4 1 2 3 4 5 $d3 v1 v2 v3 v4 8 9 19 10 $d1 v1 v2 v3 v4 12 14 15 16 so if i say test[["d2"]] or test["d2"] i should get the first two that matches the name rite but i am not getting them jus getting

hi there I have a vector with a set of data.I just wanna seperate them based on the first p and q values metioned within the data. [1] chr10p15.3 /// chr3q29 /// chr4q35 /// chr9q34.3 [2] chr1q22-q24 [3] chr1q22-q24 [4] chr1pter-q24 [5] chr1pter-q24

Hi, I have a Dataframe. A B C D 0.1 0.7 0.9 0.8 0.20 0.60 0.80 0.70 0.40 0.80 0.70 0.76 I need a resultant dataframe (A-B) (C-D) -0.6 0.1 -0.40 0.1 -0.40 -0.06 Any suggestion would be of a great help Thanks Ramya -- View this message in context: http://r.789695.n4.nabble.com/Finding-a-Diff-within-a-Dataframe-columns-tp3247943p3247943.html Sent from