similar to: combine vector and data frame on field?

Hello, How can I create a symmetric contingency table from two categorical vectors having different length of levels? For example one vector has 98 levels TotalData1$Taxa.1 [1] "Aconoidasida" "Actinobacteria (class)" "Actinopterygii" "Alphaproteobacteria" [5] "Amoebozoa"

I am very new to R and don't have any computer program experience whatsoever. I am trying to generate a heatmap of the following data: Phylum,AI,AJT,BY,GA,Grt,Sm Acidobacteria,0.5,0.7,2.7,0.1,2.6,1.0 Actinobacteria,33.7,65.1,9.7,2.0,3.9,2.1 Bacteroidetes,9.7,5.6,0.7,13.2,41.1,21.6 CCM11b,0.0,0.0,0.0,0.0,0.0,0.1 Chlamydiae,0.1,0.1,0.0,0.0,1.0,0.2

I have a dataset that looks like this (many other variables not shown. including a unique row identifier "id"): > summary(hits) query lib coverage percid Length:80664 Length:80664 Min. :0.080 Min. :0.2250 Mode :character Mode :character 1st Qu.:0.980 1st Qu.:0.8160 Median :1.000

Hi, I sometimes play around with extreme parameters for distributions and found that qbeta is not always monotone as the following example shows. I don't know whether this is serious enough to submit a bug report (as this example is near to the limitations of floating point arithmetic). Josef > x <- qbeta((0:100)/100,0.01,5) > x [1] 0.000000e+00 1.253990e-201 1.589622e-171

Hello, I can't seem to make qqmath plot text. v <- rnorm(8) qqmath(~v) # this is ok, but qqmath(~v, panel=function(x, y) { points(x, y) text(0, 0, 'print me', cex=2)}) isn't ok. The axis frame is printed properly (ie, as in qqmath(~v)), but neither 'print me' nor the points show up on the graph. I can, however, see the upper half of the word 'me' in the

Dear R users, I am looking for some advice on the proper construction of a mixed model in R, using the difference in means as the response and treating within-means residuals as a random effect. I have a dataframe (my own, a snippet of which is given below) that is composed of observations of pollen viability in flowers along tree branches. Flowers (1 to 3 per position) were collected from

Hi! I have a set of 49 pairwise comparisons that I have done. From this I would like to plot either histograms or the density plots of the values I get. Now, I can plot one histogram per comparison, but I have problems getting the output I want. When plotting like I normally would do: histogram(~percid | orgA_orgB, data = alldata) I get the histograms next to eachother in a boxlike shape.

Hello, I have a data matrix consists of species as columns and sites as rows. N Chlamydiae Deferribacteres GN12 Hyd24-12 KSB1 PAUC34f SC4 SPAM Thermi WPS-2 ZB3 AD3 Elusimicrobia GAL15 ABY1_OD1 OP9 Fusobacteria HDBW-WB69 OP11 WS1 SR1 ZB2 AC1 OP3 OP8 NC10 NKB19 TM7 WS3 Gemmatimonadetes Lentisphaerae GN02 Armatimonadetes Tenericutes Spirochaetes Epsilonproteobacteria TM6 Acidobacteria Chlorobi

I want to have a message board or forum in my site, I have looked at beast but have no clue how to use svn, and I have had no luck with savage beast either. Can anyone recommend a simple message board/forum that I could plugin and adjust with minimal effort. -- Posted via http://www.ruby-forum.com/. --~--~---------~--~----~------------~-------~--~----~ You received this message because you are

Hello, you guys have helped me before. I am setting up a multiboot system on my usb stick. At one point, with syslinux, i had the two of the three systems working. However in a sucessful attempt to get the third working, i used that os'es instructions for usb installition, which included syslinux. After which, that system worked, with its syslinux.cfg being located in a non-root folder