similar to: shoudl I use apply, sapply, etc instead of a "for loop"?

Dear R-devel list members, I'd like to suggest a more flexible procedure for generating contrast names. I apologise for a relatively long message -- I want my proposal to be clear. I've never liked the current approach. For example, the names generated by contr.treatment paste factor to level names with no separation between the two; contr.sum simply numbers contrasts (I recall an

can hrd access hrd and aministration? ------- Forwarded message follows ------- From: "Sigit" <mild_club@yahoo.com> To: "Christian Barth" <barth@cck.uni-kl.de> Subject: Re: [Samba] Need help for samba share and unix group Date sent: Wed, 20 Feb 2002 23:47:36 +0700 this is my group configuration /etc/group

Hi all, I configured samba version 2.2.1a-4 on linux RedHat and many share folders for department. this is the configure d---rwx--- 13 account account .. .. Accounting d---rwx--- 4 admin admin .. .. Administration d---rwx--- 5 director director .. .. Directors d---rwx--- 9 hrd hrd .. .. Hrd [accounting]

I would like to plot a survival curves of a group with different categories after running a Cox model with frailty() random effects terms. I just could display a survival plot of the covariable?s mean. Here an example: library(survival) fit<-coxph(Surv(time, status) ~ sex+ frailty(litter, dist='gamma', method='em'), rats) summary(fit ) suf<-survfit(fit) plot(suf,

Hello R-friends, i have a question to the "text"-function. a little test-dataset for better understanding: -the dataset was imported with read.table(....,header=TRUE) s1-s10 are the samplenames var1 var2 var3 s1 1 1 2 s2 2 3 1 s3 2 2 3 s4 5 4 3 s5 4 2 3 s6 6 3 2 s7 8 5 4 s8 7 2 1 s9 9 3 2

Hai, we are using Suse linux 8 Standard Server for PDC. Our Samba Version is 2.2.5. Past 10Months it's working good and i can login in from Windows 98,ME,XP,2000. But last month suddenly Windows XP & 2000 users cannot connect to samba PDC with Domain Login. While Joining the Samba PDC Domain there is no problem, I can get the "welcome to domain". But While login to the

Hi, The following command: axis(1, at= 1:50, labels= sampleNames(data)) produces an X-axis with 50 ticks and labels drawn from the sampleNames namespace. Problem is the labels at each tick are printed parallel to the x-axis and thus run into each other. How do I specify for the labels to be printed perpendicular to the x-axis? Thanks in advance. Anjan -- =================================== anjan

Hey, I have code that can check the quality of a data set we're working with (expression data), and I'm having some trouble writing code that would make the expression data we have tie to other data we want to link it to (called phenotype data). Does anyone have any advice on how I could make a single object that would do this? Other relevant info: I want to use the pdata() function,

Hello, The attached l32or64.c implements a com32 module that boots two different kernels with different initrds depending on whether the cpu has long mode support or not. I stumbled upon two problems while developing it with current git version (last commit 595705ffad4f63cfeb84e9bb1243df03808c2fff). The first was that syslinux_boot_linux didn't work for me. Both the command line and initrd

Hi everybody, I have a problem when trying to do the quality control with the packages simpleaffy and affyQCReport with the drosophila chip 2.0 At first I got the messeage, that the *.qcdef file is not there. I followed the instructions in tha manual and created the file like that: array drosophila2cdf alpha1 0.05 alpha2 0.065 spk bioB AFFX-r2-Ec-bioB-3_at spk bioC AFFX-r2-Ec-bioC-3_at spk bioD

Thanks for the input, Rowland! Replies inline: On Fri, Mar 1, 2019 at 8:57 AM Rowland Penny via samba <samba at lists.samba.org> wrote: [snip] > The 'Nooooo, don't do that is: > Don't change the UPN Why not? It's a recommended best practice to choose a subdomain of your primary domain (e.g. "ad.example.com"), and then add alternate UPN suffix which allows

Thanks, Martin. Based on my previous post, I thought of a more general formulation of my question that I think would be helpful to ask here. What's the best way to build an R object that links multiple datapoints about different people? I mean, I happen to have datasets that have individual gene expression data tied to individual patient characteristics (how long they survived, age, gender,

Hello, I'm pretty new to R and I am having a hrd time getting a grip. Just a question: can someone tell me how to have more than one graphics windown open at the same time? I want to look at some plote at the same time..., how is this done? If someone has a suggestion for a (good) introductory guide to R, much appreciated, but not the manual..., this one I do have. :confused: Thank you for

Hi all , I have one query. i have list of some .cel files. in my program i have to mention the path of these .cel files part of my program is, rna.data<-exprs(justRMA(filenames=file.names, celfile.path=*datadir*, sampleNames=sample.names, phenoData=pheno.data, cdfname=cleancdfname(hg18_Affymetrix U133A))) in the place of "datadir" i have to mention the character string of the

Hi, I'm very confused about R structures and the methods to go with them. I'm using R for microarray analysis with Bioconductors. Suppose without reading the documentations, what's the best way to explore a data structure when you know nothing about it? I am currently using is() / class() to see what the object is. str() / attributes() to probe inside the object, and

Hi all, I have this microarray large microarray data set (ALL) from which I would like to subset or extract a set of data based on a factor ($mol.biol). I looked up some example of subsetting in, picked up two commands and tried both but I got error messages as follows > testset <- subset(ALL, ALL$mol.biol %in% c("BCR/ABL","ALL1/AF4")) >> Error in

Hi All, Thanks for the prompt response, please see me notes: jayendren anand maduray escreveu: > Hi All. > > I have a SAMBA PDC that uses LDAP as its back end. > The OS, is UBUNTU 6.10 Server. > SAMBA Version is 3.022 > > The problem is, when a client logs onto the Domain, he presses > Control+Alt+Del, and chooses Change Password. > He types in the old password, then

On 2018-06-13 00:09, Joseph Tam wrote: > On Tue, 12 Jun 2018, Walter Ulmke wrote: > >> ... and just want to login using the standard Linux login > > Depends on what you which "standard" you mean but I'll just assume > you're using PAM, as suggested by your config. > >> auth_mechanisms = plain login digest-md5 cram-md5 ntlm rpa apop >>

Hi all, When I ran a script containing the following codes: png(paste(savepath,"a_rnaplot.png",sep = ""),width = fwidth, height = fheight,pointsize = fpointsize); data_deg <- AffyRNAdeg(data_cel) plotAffyRNAdeg(data_deg,col=cols,lty=1,lwd = "2") #a <- par("fin") legend("bottomright",sampleNames(data_cel),col=cols,lty=1)

Hello, After running R CMD check on my package I received the following error on package dependencies: * using log directory 'C:/z-zBackup/Nuvera Bio on Iatros01/Development/RPackages/nvNormalize/nvNormalize.Rcheck' * using R version 2.9.1 (2009-06-26) * using session charset: ISO8859-1 * checking for file 'nvNormalize/DESCRIPTION' ... OK * checking extension type ... Package *