Displaying 20 results from an estimated 10000 matches similar to: "error message: only first element in each line of matrix used"
2009 Nov 23
1
R: Re: chol( neg.def.matrix ) WAS: Re: Choleski and Choleski with pivoting of matrix fails
It works! But Once I have the square root of this matrix, how do I convert it
to a real (not imaginary) matrix which has the same property? Is that
possible?
Best,
Simon
>----Messaggio originale----
>Da: p.dalgaard at biostat.ku.dk
>Data: 21-nov-2009 18.56
>A: "Charles C. Berry"<cberry at tajo.ucsd.edu>
>Cc: "simona.racioppi at
2009 Nov 25
1
R: Re: R: Re: chol( neg.def.matrix ) WAS: Re: Choleski and Choleski with pivoting of matrix fails
Dear Peter,
thank you very much for your answer.
My problem is that I need to calculate the following quantity:
solve(chol(A)%*%Y)
Y is a 3*3 diagonal matrix and A is a 3*3 matrix. Unfortunately one
eigenvalue of A is negative. I can anyway take the square root of A but when I
multiply it by Y, the imaginary part of the square root of A is dropped, and I
do not get the right answer.
I tried
2005 Nov 10
2
ltext - adding text to each panel from a matrix
Hi all (really probably just Deepayan):
In the plot below I want to add text on either side of each violin plot that
indicates the number of observations that are either positive or negative.
I'm trying to do this with ltext() and I've also monkeyed about with
panel.text(). The code below is generally what I want but my calls to
ltext() are wrong and I'm not sure how to fix them.
2008 Oct 31
4
[ifelse] how to maintain a value from original matrix without probs?
Dear all,
I have a matrix with positive and negative values.
>From this I would like to produce 2 matrices:
1st - retaining positives and putting NA in other positions
2nd - retaining negatives and putting NA in other positions
and then apply rowMeans for both.
I am trying to use the function ifelse in the exemplified form:
ifelse(A>0,A,NA)
but by putting A as a 2nd parameter it
2024 Mar 20
1
geom_edge & color
Dear community
I am using ggraph to plot a network analysis. See part 2 in the working
example.
Besides different colors for different groups of nodes:
--> geom_node_point(aes(size = V(network)$hub_score*200, color=
as.factor(V(network)$community)))
I additionally want to consider different colors for different edge groups
The grouping is defined in the edge_list$relationship: negative
2012 Jun 14
1
how to export output
hello,
I am using following command
classify_polarity(documents,algorithm="bayes",verbose=TRUE)
output is:
[1] "DOCUMENT 1"
[1] "WORD: excited CAT: positive POL: strongsubj SCORE: 8.44419229853175"
[1] "WORD: happy CAT: positive POL: strongsubj SCORE: 8.44419229853175"
[1] "WORD: optimistic CAT: positive POL: weaksubj SCORE: 7.7510451179718"
[1]
2015 Apr 11
2
[LLVMdev] How doesn't llvm generate IR for logical negate operation
How can I generate LLVM IR for both logical NEG (!)? For example, if I have
Int32Ty a,
For the bitwise NEG(~):
c = ~a ;
I can use the following API from LLVM:
BinaryOperator *neg = BinaryOperator::CreateNeg(nbits, "bitwiseNEG",
insertBefore);
How, if I want to generate logical NEG:
c = !a;
what should I do for this?
Thanks
-------------- next part --------------
An HTML
2024 Mar 21
1
geom_edge & color
Dear Sibylle,
your example is not working! E.g. no data for "aes_collapsed".
Best,
Kimmo
ke, 2024-03-20 kello 19:28 +0100, SIBYLLE ST?CKLI via R-help kirjoitti:
> Dear community
>
> I am using ggraph to plot a network analysis. See part 2 in the working
> example.
> Besides different colors for different groups of nodes:
> --> geom_node_point(aes(size =
2006 Dec 01
3
Make many barplot into one plot
Dear all,
## I have 4 tables like this:
satu <- array(c(5,15,20,68,29,54,84,119), dim=c(2,4),
dimnames=list(c("Negative", "Positive"), c("Black",
"Brown", "Red", "Blond")))
dua <- array(c(50,105,30,8,29,25,84,9), dim=c(2,4),
dimnames=list(c("Negative", "Positive"),
2006 Jan 07
2
need palette of topographic colors similar to topo.colors()
Dear useRs,
I got stuck trying to generate a palette of topographic colors that
would satisfy these two requirements:
- the pallete must be 'anchored' at 0 (just like on a map), with
light blue/lawn green corresponding to data values close to 0 (dark
blue to light blue for negative values, green-yellow-brown for
positive values)
- the brown must get darker for higher positive
2008 Dec 16
1
refer to next line within a data-frame an select cases
Hi,
I have a problem sorting and selecting entries within a data-frame and
I don't know if it is possible to solve it with R ... (probably yes,
but I have no idea how).
Following Data;
row1 row2
a 12
pos NA
a 3
neg NA
a 5
neg NA
a 11
pos NA
I want to extract the values in row 2 in the lines with an "a" in row1.
But I want to have two vectors: vector x with all
2015 Apr 11
2
[LLVMdev] How doesn't llvm generate IR for logical negate operation
Thanks, Bruce. So, what is the easiest way to check if there is any bit set
to 1 in a <N x i1> vector type? I used bitcast instruction to cast it into
"iN" first and them compare iN to 0. Do you have a better way to do it?
Thanks again.
On Fri, Apr 10, 2015 at 5:22 PM, Bruce Hoult <bruce at hoult.org> wrote:
> LLVM doesn't have a "logical neg" (or
2024 Mar 22
1
geom_edge & color
Dear community
Find enclosed the full working example.
Many thanks
Sibylle
Test_cat.csv
Names
Subcategory_type
sources.cyto
source
Factor
A.A
material
"A"
A
1
B.B
material
"B"
B
1
C.C
regulation
"C"
C
1
D.D
regulation
"D"
D
1
E.E
habitat
"E"
E
1
F.F
cultural
"F"
F
1
Test_adjac.csv
2024 Mar 22
1
geom_edge & color
Hi,
this seems to work (assuming that your problem was the setting of
colours...):
--- snip ---
network %>%
ggraph(., layout = "auto") +
# This produces an error...
# geom_edge_arc(curvature=0.3, aes(width=(E(network)$weight/10),
color=c("darkblue", "red")[as.factor(edge_list$relationship)], alpha=0.5))
+
# ... this works :-)
2011 Jun 27
1
Neg Binomial In GEE
Hi, I want to fit a GEE with a negative binomial distribution. I have uesd
already a poisson glm and then neg binommial to deal with alot of
dispersion. In my neg binomial residuals i have some patterns so i have
implemented a GEE, but only with a poisson family as i couldnt with neg
binomial. However the residual patterns in fact look worse here. When i
try and put neg binomial family it
2017 Dec 26
1
identifying convergence or non-convergence of mixed-effects regression model in lme4 from model output
Hi R community!
I've fitted three mixed-effects regression models to a thousand
bootstrap samples (case-resampling regression) using the lme4 package in
a custom-built for-loop. The only output I saved were the inferential
statistics for my fixed and random effects. I did not save any output
related to the performance to the machine learning algorithm used to fit
the models (REML=FALSE).
2015 Apr 11
2
[LLVMdev] How doesn't llvm generate IR for logical negate operation
Yes, but my point is that there would be some overhead to do cast the <N x
i1> vectortype to an integerNty. Is there any good way to check not all of
these N bits in the vectortype are 0s?
On Fri, Apr 10, 2015 at 5:37 PM, Bruce Hoult <bruce at hoult.org> wrote:
> Sure, if you actually just want an i1 saying whether or not at least one
> bit is set to 1, then comparing against 0
2010 Nov 25
1
difficulty setting the random = argument to lme()
My small brain is having trouble getting to grips with lme()
I wonder if anyone can help me correctly set the random = argument
to lme() for this kind of setup with (I think) 9 variance/covariance
components ...
Study.1 Study.2 ...
Study.10
Treatment.A: subject: 1 2 3 4 5 6 etc. 28 29 30
Treatment.B: subject: 31
2011 Oct 13
2
GLM and Neg. Binomial models
Hi userRs!
I am trying to fit some GLM-poisson and neg.binomial. The neg. Binomial
model is to account for over-dispersion.
When I fit the poisson model i get:
(Dispersion parameter for poisson family taken to be 1)
However, if I estimate the dispersion coefficient by means of:
sum(residuals(fit,type="pearson")^2)/fit$df.res
I obtained 2.4. This is theory means over-dispersion since
2009 Jan 29
4
Text in a character vector to indicate "ifelse" argument
Hello
I have a data set that looks like this;
> b2
dato chr status PRRSvac
PRRSsanVac PRRSsanDk PRRSdk
33 2007-12-03 090432 R?d SPF
34 2007-02-09 090432 R?d SPF+sanDK
35 2002-12-17 090432 R?d SPF+DK
36 2002-11-27 090432 R?d SPF+sanDK
37 2002-07-23