similar to: Make check failure for R-2.4.1

I compiled R 2.1.0 under Windows XP SP2 as a preliminary to rebuilding a custom package for use with R 2.1.0. The compile completed successfully, and I was able to run demo(graphics) successfully. But make check and make check-recommended fail. > version _ platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor 1.0 year 2005

Hi, I am trying to compile R-2.1.1 on MacOSX 10.3.9, but the make is failing (I am building it without all the aqua stuff): ./configure --enable-R-shlib --with-lapac make .... Snip ..... gcc -dynamiclib -L/sw/lib -L/usr/local/lib -install_name /Library/Frameworks/R.framework/Versions/2.1.1/Resources/lib/libRlapack.dyli b -o libRlapack.dylib dlamc.lo dlapack0.lo dlapack1.lo dlapack2.lo

Today I tried to install the R-2.5.0 (currently running R-2.4.1) on Mandriva Linux. The ./configure and make commands seem to run fine, but "make check" gives the following messages: running regression tests make[3]: Entering directory `/home/ethomp04/R-2.5.0/tests' running code in 'reg-tests-1.R' ...make[3]: *** [reg-tests-1.Rout] Error 1 make[3]: Leaving directory

Peter, Retry how much of it? That is, where does it go in the sequence from svn up to make check? I'll update my notes so as to do it correctly. In any case, I put it first and reran the whole command chain. I had recently upgraded linux from 14.xx LTS to 16.04 LTS so it makes sense to start over. This removed the large diff in base-Ex.Rout from the first part of the log, but the

I have a failure in 'make check' and I would appreciate assistance regarding what to do about it. Thanks -Don Installing R-1.2.3 on build[99]% uname -sr SunOS 5.8 (for those who may recall my previous request for help, I have updated GCC to 2.95.3, and configured with gcc, GCC's c++, and f77 [not g77]) Running 'make check' got this: creating `no-segfault.R'

This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo). The failure message is at the very end. (It's due to be replaced in a couple of weeks.) The sequence of steps was svn up tools/rsync-recommended ./configure make make check-all |& tee zzz Terry T. Result of ./config R is now configured for i686-pc-linux-gnu Source directory: .

My AsteriskNow box was updated to Centos 5.6 (2.6.18-238.5.1.el5) and DAHDI doesn't want to load. I've tried building it from the sources, but get this error message: CC [M] /root/Desktop/dahdi-linux-complete-2.4.1.1+2.4.1/linux/drivers/dahdi/xpp/card_bri.o In file included from /root/Desktop/dahdi-linux-complete-2.4.1.1+2.4.1/linux/drivers/dahdi/xpp/xpd.h:31, from

Hello, I am building R-2.4.1 on an SGI IRIX platform, using gcc 3.3. gmake check failed, and the arith-true.Rout.fail file indicated: > is.na(mean(c(1,NA,NA)[-1], trim = .1, na.rm = TRUE)) [1] FALSE > I tried the mean() command in R and got: > mean(c(1,NA,NA)[-1], trim = .1, na.rm = TRUE) [1] Inf I think the problem is in the na.rm = TRUE, because I get: > mean(c(1,NA,NA)[-1]) [1]

Hello, I am fairly new to using R and am trying to install it on my Linux machine, running Scientific Linux. I get through running 'configure' and 'make' OK, but when I run 'make check', I get the following error: make check make[1]: Entering directory `/home/gruchti/Programs/R-2.7.0/tests' make[2]: Entering directory `/home/gruchti/Programs/R-2.7.0/tests'

A simple example follows. The file is called Test.R # Example rm(list=is(all=TRUE)) cat("Enter file name") fn<-scan(what="") I execute the following: @C:\PROGRA~1\R\R-2.4.1\bin\Rterm.exe --no-restore --no-save < Test.R > Rout.txt I do not see the "Enter file name" or have the opportunity to enter the file name. I am running R in windows XP. Thanks for

I'm baffled. When I run make check after installing from source, I get a Error 2. From my understanding of how these things work, it would appear to be coming from this (as at the end of base-Ex.Rout.fail: > has.VR <- require(MASS, quietly = TRUE) Attaching package 'MASS': The following object(s) are masked from package:base : confint confint.lm nclass.FD nclass.scott

Hi, I installed R-2.4.0 and R-2.4.1 on linux redhat (RHEL 3.0), and am encountering the following messages below. I searched the R FAQs and over the net, but couldn't find helpful information. When I "check-all" I do see some diff's (e.g., for "stats", nls.Rout and nls.Rout.save in tests/stats.Rcheck/tests; "cluster"; and "rpart'). I don't know

Hi everyone, I am having installation problems, but this is how it all started: I had some errors running the bioconductor package affyPLM that uses LAPACK/Blas > Pset <- fitPLM(Data) Background correcting PM Normalizing PM Fitting models /usr/local/lib/R/bin/exec/R: relocation error: /usr/local/lib/R/lib/libRlapack.so: undefined symbol: s_copy # thrown out of R .... I was using R

I have built today's R-devel without problem on a fresh installation of debian testing. However, 'make check' fails. In 'tests/Examples/tools-Ex.Rout.fail': > ### * vignetteDepends > > flush(stderr()); flush(stdout()) > > ### Name: vignetteDepends > ### Title: Retrieve Dependency Information for a Vignette > ### Aliases: vignetteDepends > ### Keywords:

I'm trying to build R on RedHat EL4. The compile went fine, but a make check ran into a problem and produced a file "internet.Rout.fail". Judging by the last part of that file, it was trying to run an R routine called "httpget" to retrieve the URL http://www.stats.ox.ac.uk/pub/datasets/csb/ch11b.dat. The precise error it encountered was: Error in

You may want to retry that after a make distclean, in case anything changed in the toolchain. -pd > On 6 Apr 2017, at 14:43 , Therneau, Terry M., Ph.D. <therneau at mayo.edu> wrote: > > This run was done this AM on my linux box, and older 32 bit Dell optiplex (core 2 duo). The failure message is at the very end. (It's due to be replaced in a couple of weeks.) The sequence

> On 6 Apr 2017, at 15:51 , Therneau, Terry M., Ph.D. <therneau at mayo.edu> wrote: > > Peter, > Retry how much of it? That is, where does it go in the sequence from svn up to make check? I'll update my notes so as to do it correctly. From the configure step, I'd expect. Actually, now that I look at your output again, you seem to be compiling in the source

For a while I have been getting that the complex tests fails on RHEL 6. The specific issue has to do with tanh (see below for full output from complex.Rout.fail). This is both with the stock compiler (GCC 4.4.7) and a compiler supplied through the conda project (GCC 4.8.5). The compiler supplied through conda ends up linking R to certain system files, so the binary is not completely independent

Dear friends, I am trying to install R-2.4.1 from source on Solaris 11 x-86. 64 bits, running on Sun Ultra-20 workstation, and using the SunStudio 11 compilers. I was able to "configure" R correctly, but received an error in "gmake", aparently related to bzip2 which I have been unable to debug. The messages are listed below. The configure.log and configure.status files are

I have R v2.0.1 already running on the machine in question; a fairly generic Fedora Core 3 machine. I am trying to build the new version 2.1.0 and have not been able to troubleshoot the problem I encountered. I'm hoping someone else has seen it and can suggest a troubleshooting avenue to me. The build succeeds, both from the source RPM and from the tarball. I believed I had all the build