similar to: Issues with Sweave and inclusion of graphics from nlme

Hello I would like to delete some values at random in a data frame. Does anyone know how I could do? With best regards Caroline

Hi, I try to insert R graphs into a latex file and I am using a Texniccenter/MikTex combination in my Windows XP. Here are the errors I got. Could someone give me some clues? In R, I did > plot(sin(1:10), pch="+") > dev.print(device=postscript, "C:\\myFigure.eps",onefile=FALSE, horizontal=FALSE, paper="special") In latex, I did (myFigure.eps is in the same

Greetings, I have a groupedData (nmGroupedData) object created with the following syntax: Soil <- groupedData( ksat ~ conc | soil_id/sar/rep, data=soil.data, labels=list(x='Solution Concentration', y='Saturated Hydraulic Conductivity'), units=list(x='(cmol_c)', y='(cm/s)') ) the original data represents longitudinal observations in the form of:

Hi, I'm trying to realise a repport with R and Latex (TeXnicCenter and Miktex for Windows) using Sweave(). I'd like to save my plots in a given size. How can I do that ? The code is : \SweaveOpts{prefix.string = figs/plot, eps = FALSE, pdf = TRUE} <<partI, echo=FALSE ,fig=TRUE, include=FALSE>>= plotFunction() @ \includepdf[pages=-]{figs/plot-partI} When I use

Dear List: I am unsure if my problem is with Sweave or LaTeX. Anyhow, I am using the MikTeX distribution and TexnicCenter. I can easily create Sweave files and all goes well until I try to incorporate graphics. I use the same code as found in the examples found in the users manual. In R, the graphics I want are created as Sweave is creating the .tex file. When I examine the .tex file

Hello I would like to generate covariance matrix with autoregressive structure. I saw some functions in nlme such as corAR1 for example but I don't know how to use it for my goal. Could someone help me or advise me another function? Thank you in advance Caroline

I have tried to find a neat way to include graphs from R in LaTeX documents, but have not succeeded (I work with a WinEdt/MikTeX combination). The two roads I have stumbled along so far are the following: *Generate postscript files and convert them into EPS files by means of GhostScript or other not so straightforward tools. *Generate pictex files and include these. None of these solutions have

Dear all, I would like to estimate the parameters of a mixture of two beta binomial distributions. I saw the function fitdistr from the MASS library could be a solution but I have some difficulties. Does anyone know how to specify to fitdistr another function as these which are predefined? Or is there any other solution to estimate the parameters? Thank you in advance Caroline

I'm trying to write a function that has a dataframe as an argument. Within the function, I call groupedData to create a grouped-data object from the dataframe argument. However, the groupedData function doesn't seem to see the data. I'm guessing it's getting the argument name rather than its value, but I'm not positive. My system: R 1.3.1 on WinNT 4.0 (Pentium II), nlme

Dear All: For a few days now I have struggled with recreating a stable LaTeX/R/Sweave environment on a new Windows XP SP3 machine. Unfortunately it seems that I ran out of good ideas and I would like your expert opinion on how I should approach this task and be successful. In essence, I installed (several times) in this order the following: R2.10.1 (and then R 2.9.2), Adobe Acrobat Reader 9

Hi, I am trying to install the nlme package, but during installation I get the message <snip> pdSymm text html latex example plot.ACF text html latex example missing link(s): xyplot plot.Variogram text html latex example missing link(s): xyplot plot.augPred

R users, I'm at a loss with a problem considering running .tex files produced by Sweave. When I run (R 2.7.0): --------------------------------------------------- #Taken from ?Sweave testfile <- system.file("Sweave", "Sweave-test-1.Rnw", package = "utils") ## enforce par(ask=FALSE) options(device.ask.default=FALSE) ## create a LaTeX file Sweave(testfile)

the problem is a little hard to explain; the .Rnw files (below) probably do a better job, but here goes ... Sweave doesn't like it when i size a graphical device in a code chunk using either, e.g.: windows(width=20, height=5) in Windows, or, e.g. x11(width=20, height=5) under X, when i then plot something in said device and try to include this graphical output in the resulting

Hi there, I'm trying to realise a repport with R and Latex (TeXnicCenter and Miktex for Windows) using Sweave(). I'd like to save my plots in a given size. How can I do that ? The code is : \SweaveOpts{prefix.string = figs/plot, eps = FALSE, pdf = TRUE} <<partI, echo=FALSE ,fig=TRUE, include=FALSE>>= plotFunction() @ \includepdf[pages=-]{figs/plot-partI} The issue is

I am completely new to LaTeX and Sweave, so I am trying to follow the tutorial in the following link: http://www.r-bloggers.com/using-latex-r-and-sweave-to-create-reports-in- windows/ I installed MiKTeX 2.9 and TeXnicCenter, but I get a build error when compiler the example file: The two errors are: "Error: running 'texi2dvi' on 'test.tex' failed" and "R> !

Dear all, I was hoping someone may know a way of running texi2dvi while ignoring bibtex errors, or any other work around (such as not running bibtex at all, if possible). The context is that I have an R program that does some calculations and writes a table into various folders, one per country for several countries. I have a latex file that takes the table as an input, and this latex file is

Dear List, This may be related to this email thread initiated by Ben Bolker last month: https://stat.ethz.ch/pipermail/r-devel/2011-July/061630.html In answering this Question on StackOverflow http://stackoverflow.com/q/7195628/429846 I noticed that `methods()` was not listing some S3 methods for `plot()` provided by the mgcv package. At the time I wanted to check the development version of R as

Dear Group: I have been trying to write an R function within which the function groupedData() would be used. The following is a sample program: ####################### sid<-rep(1:6,times=2) time<-c(1:12) trt<-rep(letters[1:3],times=4) tem<-data.frame(sid,time,trt) test1.fun<- function(dat=dat) { groupedData(time ~ trt|sid, data=dat) } test1.fun(dat=tem)

Solr 7 returns JSON by default but fts_solr requires XML. Would be good to have wt=xml added to the query to force it to xml all the time, this would prevent errors if solr has not had xml set as default for index. Dovecot 2.2.36 Centos 6 *Doveadm Request:* doveadm search -u caroline at covermg.com TEXT smith doveadm(caroline at covermg.com): Error: fts_solr: Invalid XML input at 1:0: not

This may be asking too much, but I'm wondering if anyone has a solution (even a hack) for creating multiple (overlay) plots in an Sweave file and post-processing the overlays in beamer appropriately. For example, suppose I have a series of figure blocks in my .Rnw file: <<plot1,fig=TRUE>>= [stuff] @ <<plot2,fig=TRUE>>= [stuff] @ <<plot3,fig=TRUE>>=