similar to: how to manipulate counts matrix?

Displaying 20 results from an estimated 3000 matches similar to: "how to manipulate counts matrix?"

2008 Aug 12
2
perl expression question
I have a string such as fileName<-"Agg.20.20.20-all-01". All I want to do is pull the "20.20.20" and the "all" as strings. Obviously, they aren't always those values. The "20.20.20" can be "30.30.30" but it's always after the . which is next to the second g in Agg and it's always the same length. The all might not always be
2008 Aug 06
2
matching problem
I have a matching problem that I cant solve. mystring = "xxx{XX}yy{YYY}zzz{Z}" where "x","X","y","Y","z","Z" basiclly can be anything, letters, digits etc. I'm only interested in the content within each "{}". I am close but not really there yet. library(gsubfn) strapply(mystring,"\\{[^\\}]+",, perl=F)
2010 Mar 15
2
tcltk and R
I have had some comments on sqldf regarding its dependence on tcltk such as the second last sentence on this blog post: http://translate.google.com/translate?hl=en&sl=zh-CN&u=http://www.wentrue.net/blog/%3Fp%3D453&prev=http://blogsearch.google.com/blogsearch%3Fhl%3Den%26ie%3DUTF-8%26q%3Dsqldf%26lr%3D%26sa%3DN%26start%3D10 sqldf does not directly use tcltk but it does use strapply in
2008 Jul 08
4
Manipulate Data (with regular expressions)
Dear Everyone, I try to automatically manipulate the data of a variable (class = factor) like x 220 220a 221 221b B221 Into two variables (class = numeric) like x y 220 0 220 1 221 0 221 1 221 1 y has to carry the information about the class (number or string) of the former x-Variable. I could do it by hand like x[x == "220a"] <- 220
2010 Jul 02
3
Good Package(s) for String and URL processing?
Are there packages that allow improved String and URL processing? E.g. extract parts of a URLs such as sub-domains, top-level domain, protocols (e.g. https, http, ftp), file type based on endings, check if a URL is valid or not, etc... I am currently only using split and paste. Are there better and more efficient ways to handle strings e.g. finding sub-strings or to do pattern matching? What
2010 Aug 26
5
Quick GREP challenge
> grep("f[0-9]+=", "f1=5,f22=3,", value = T) [1] "f1=5,f22=3," How do I make the line output c("f1", "f22") instead? (Actually, c(1,22) would be even better). Thank you. -- View this message in context: http://r.789695.n4.nabble.com/Quick-GREP-challenge-tp2339486p2339486.html Sent from the R help mailing list archive at Nabble.com.
2012 Mar 07
3
GPS handling libraries or (String manipulation)
Dear all, I would like to ask you if R has a library that can work with different GPS formats For example  I have a string of this format N50° 47.513 E006° 03.985 and I would like to convert to GPS decimal format. that means for example converting the part N50° 47.513 to 50 + 47/60 + 513/3600. Is it possible to do that with R? What is the name of such a library? I would like to thank you in
2008 Jan 23
1
Package Building and Name Space
Hello, I just don't get this and would appreciate if someone could write a line or two: I'm trying to build this package and it stops installing after I add the following to the NAMESPACES file: >importFrom(gsubfn,strapply) The error during the package test is: Error in MyPackage::MyFunction : package 'MyPackage' has no name space and is not on the search path Calls:
2006 Nov 29
1
Extract some character from a character vector of length 1
the content of th character vector (of length 1) is as follows: a <- "something2 ....pat1 name1 pat2 something2....pat1 name2 pat2....pat1 name3 pat2 " I would like to extract the character bewteen pat1 and pat2. That's to say, I would like to get a vecter of c("name1", "name2","name3"). What I did is use strsplit() twise. But I wonder if there
2008 Nov 02
5
R newbie: how to replace string/regular expression
Hello; I am a R newbie and would like to know correct and efficient method for doing string replacement. I have a large data set, where I want to replace character "M", "b", and "K" (currency in Million, Billion and K) to millions. That is 209.7B with (209.7 * 10e6) and 100.00K with (100.00 *1/100) and etc.. d <- c("120.0M", "11.01m",
2006 Oct 17
4
if statement error
Hi List, I was not able to make this work. I know it is a simple one, sorry to bother. Give me some hints pls. Thanks! Jen if(length(real.d)>=30 && length(real.b)>=30 && beta1*beta2*theta1*theta2>0 ) { r <- 1; corr <- 1; } real.d and real.b are two vectors, beta1,beta2,theta1,and theta2 are constants. The error occurred like this: Error in if
2008 Oct 28
1
gsubfn, strapply, REGEX Problem
Hi all, I swear this used to work: library(gsubfn) strapply("S(AC,P)TVDK(8)EELVQK(8), ".[(].{1,2}[)]|.")[[1]] But somewhere along the update path it stopped ... now giving me this Error in base::gsub(pattern, rs, x, ...) : invalid backreference 2 in regular expression Can't figure it out. What am I doing wrong? Thanks for any hints, Joh
2011 Feb 13
3
String manipulation
Please consider following string: MyString <- "ABCFR34564IJVEOJC3434" Here you see that, there are 4 groups in above string. 1st and 3rd groups are for english letters and 2nd and 4th for numeric. Given a string, how can I separate out those 4 groups? Thanks for your time [[alternative HTML version deleted]]
2023 Apr 12
1
Split String in regex while Keeping Delimiter
On Wed, 12 Apr 2023 08:29:50 +0000 Emily Bakker <emilybakker at outlook.com> wrote: > Some example data: > ?leucocyten + gramnegatieve staven +++ grampositieve staven ++? > ?leucocyten ? grampositieve coccen +? > ? > I want to split the strings such that I get the following result: > c(?leucocyten +?, ??gramnegatieve staven +++?, > ??grampositieve staven ++?) >
2010 Jun 03
5
string handling
I have a data.frame as the following: var1 var2 9G/G09 abd89C/T90 10A/T9 32C/C 90G/G A/A . . . . . . 10T/C 00G/G90 What I want is to get the letters which are on the left and right of '/'. for example, for "9G/G09", I only want "G", "G", and for "abd89C/T90", I only want "C" and
2010 May 05
1
extracting a matched string using regexpr
Given a text like I want to be able to extract a matched regular expression from a piece of text. this apparently works, but is pretty ugly # some html test<-"</tr><tr><th>88958</th><th>Abcdsef</th><th>67.8S</th><th>68.9\nW</th><th>26m</th>" # a pattern to extract 5 digits > pattern<-"[0-9]{5}" #
2008 Jun 14
2
strsplit, keeping delimiters
Hi all, Does anyone have a version of strsplit that keeps the string that is split by. e.g. from x <- "A: 123 B: 456 C: 678" I'd like to get c("A:", "123 ", "B: ", "456 ", "C: ", 678) but strsplit(x, "[A-Z]+:") gives me c("", " 123 ", " 456 ", " 678") Any ideas? Thanks,
2011 Feb 01
3
R string help
Dear R guru: If I got a variable aaa<- "up.6.11(16)" how can I extract 16 out of the bracket? I could use substr, e.g. substr(aaa, start=1, stop=2) [1] "up" But it needs start and stop, what if my start or stop is not fixed, I just want the number inside the bracket, how can I achieve this? Many thanks yan
2008 Apr 09
11
Number of words in a string
Hi R, A quick question: How do we find the number of words in a string? Example: C="Have a nice day" And the number of words should be 4. any built in function or?... Thanks, Shubha Shubha Karanth | Amba Research Ph +91 80 3980 8031 | Mob +91 94 4886 4510 Bangalore * Colombo * London * New York * San José * Singapore * www.ambaresearch.com This e-mail may contain
2010 Oct 13
5
Regular expression to find value between brackets
Hi, this should be an easy one, but I can't figure it out. I have a vector of tests, with their units between brackets (if they have units). eg tests <- c("pH", "Assay (%)", "Impurity A(%)", "content (mg/ml)") Now I would like to hava a function where I use a test as input, and which returns the units like: f <- function (x) sub("\\)",