similar to: how to fit with "lme" function

Hi everyone, I would like to ask a question regarding to the data used to fit the mixed model. I wonder that, for the response variable data used to fit the mixed model (either via "spm" or "lme"), we must have several observations per subject (i.e. Yij, i = 1,..,M, j = 1,.., ni) or it can be just one observation per subject (i.e. Yi, i = 1,...,M). Since we have to

Hi, I am new to R for solving optimization problems, I have set of communication channels with limited capacity with two types of costs, fixed and variable cost. Each channel has expected gain for a single communication. I want to determine optimal number of communications for each channel maximizing ROI)return on investment) with overall budget as constraint.60000 is the budget allocated.

Dear R users/developers I requested help to solve the problem of formulating Multivariate Sample selection model by using Full Information Maximum Likelihood (FIML)estimation method. I could not get any response. I formulated the following code of FIML to analyse univariate sample selection problem. Would you please advise me where is my problem library (sem) library(nrmlepln) Selection

Hola a todos, Me gustaria pedir vuestra ayuda a encontrar el error que no consigo encontrar en este archivo. He revisado todo mil veces y probado y no doy con ello.Adjunto el archivo con Google drive porque es muy grande. ? monicap_50.csv <https://docs.google.com/file/d/0B8o2KrPEgG7ATlBMc19lTVk1d3M/edit?usp=drive_web> ? Este es el script, y lo que no entiendo que pasa es que tengo 592044

Dear guRus: I am using lmer for a mixed model that includes a random intercept for a set of effects that have the same distribution, Normal(0, sig2b). This set of effects is of variable size, so I am using an as.formula statement to create the formula for lmer. For example, if the set of random effects has dimension 8, then the lmer call is: Zs<-

Dear all, I have a set of data with 4 inputs (independent variables) and one output (dependent variable). I want to perform a regression analysis in order to fit these data to a regression model, however due to the non-linearity of the model I do not have a clue which equation to use. I am thinking of starting with a very general equation including ^3 terms and interactions between the variables

Hi all, I have a data frame with "clustered" rows as follows: Cu1 x1 y1 z1 ... Cu1 x2 y2 z2 ... Cu1 x3 y3 z3 ... # end of first cluster Cu1 Cu2 x4 y4 z4 ... Cu2 x5 y5 z5 Cu2 ... # end of second cluster Cu2 Cu3 ... ... "cluster"-size is 3 in the example above (rows making up a cluster are always consecutive). Is there any faster way to sample n clusters (with

Dear All, I am trying to perform MANOVA. I have table with 504 columns(species) and 36 rows) with two grouping (season and location) Zx <- Z[c(4:504)] Zxm <- as.matrix(Z) m<- manova(Zxm~Season*location, data=Z) when I do summary.aov, I get respond for each species but summary.manova summary.manova(m) :" residuals have rank" 24<501. What can it be the reason for this error

I am trying to do a surface profile plot. data is X                  Y(1)             Z(1) 1-jan-02       2002        number 2-jan-02       2002        number . . . 1-jan-03       2003 (Y2)     number Z(2) 2-jan-03       2003 (Y2)     number Z(2) . . . until dec 31 2007.   I used the plot3d funtions to build a scatter point plot. Call rinterface.rrun("library(rgl)") Call

I have a function called nnmf which takes in one matrix and returns two matrices. for example, > X [,1] [,2] [,3] [,4] [1,] 1 4 7 10 [2,] 2 5 8 11 [3,] 3 6 9 12 > z=nnmf(X,2) > z$W [,1] [,2] [1,] 0.8645422 0.6643681 [2,] 1.7411863 0.5377504 [3,] 2.6179287 0.4111063 > z$H [,1] [,2] [,3] [,4] [1,] 1.14299486

Ralf, et al., Attached is the latest version of my autovectorization patch. llvmdev has been CC'd (as had been suggested to me); this e-mail contains additional benchmark results. First, these are preliminary results because I did not do the things necessary to make them real (explicitly quiet the machine, bind the processes to one cpu, etc.). But they should be good enough for discussion.

Hi R users, I have a couple of questions about some problems that I am facing with regard to numerical integration and optimization of likelihood functions. Let me provide a little background information: I am trying to do maximum likelihood estimation of an econometric model that I have developed recently. I estimate the parameters of the model using the monthly US unemployment rate series

On Sat, 2011-10-29 at 12:30 -0500, Hal Finkel wrote: > Ralf, et al., > > Attached is the latest version of my autovectorization patch. llvmdev > has been CC'd (as had been suggested to me); this e-mail contains > additional benchmark results. > > First, these are preliminary results because I did not do the things > necessary to make them real (explicitly quiet the

Dear R experts/ users Full Information Maximum Likelihood (FIML) estimation approach is considered robust over Seemingly Unrelated Regression (SUR) approach for analysing data of multivariate sample selection problem. The zero cases in my dependent variables are resulted from three sources: Irreverent options, not choosing due to negative utility and not used in the reported time. FIML can

Dear list, I was curious how to subtract a vector from matrix? Say, I have mat <- matrix(1:40, nrow=20, ncol=2) x <-c(1,2) I want, x-mat[1,] and x-mat[2,], and so on... Basically, subtract column elements of x against column elements in mat. But x-mat won't do it. Thanks, Mike [[alternative HTML version deleted]]

I'm trying to do some smoothing with lme and am having some difficulty bringing commands over from S-PLUS to R. I have the following setup (modified from Ngo and Wand, 2004): set.seed(1) x <- runif(200) y <- sin(3*pi*x) + rnorm(200)*.4 ## library(splines) z <- ns(x, 4) The following runs without error on S-PLUS f <- lme(y ~ 1, random = pdIdent(~ -1 + z)) But in R I get

On Sat, 2011-10-29 at 15:16 -0500, Hal Finkel wrote: > On Sat, 2011-10-29 at 14:02 -0500, Hal Finkel wrote: > > On Sat, 2011-10-29 at 12:30 -0500, Hal Finkel wrote: > > > Ralf, et al., > > > > > > Attached is the latest version of my autovectorization patch. llvmdev > > > has been CC'd (as had been suggested to me); this e-mail contains > >

On Sat, 2011-10-29 at 14:02 -0500, Hal Finkel wrote: > On Sat, 2011-10-29 at 12:30 -0500, Hal Finkel wrote: > > Ralf, et al., > > > > Attached is the latest version of my autovectorization patch. llvmdev > > has been CC'd (as had been suggested to me); this e-mail contains > > additional benchmark results. > > > > First, these are preliminary

Hi List, Am trying to customize a legend in trellis: Draws 2x5 lines in 5 colors and 2 linetypes. I would like to add two more items to the legend showing the key for the line types above the colored legend. Any suggestions welcome - thanks Herry ############################# #Following example code: library(gregmisc) trellis.device(bg="white") i1=0 i2=-1.89767506 i3=-1.17087085

I use a script to get the lastest samba: #!/usr/bin/ksh echo "\npassword: cvs\n" cvs -d :pserver:cvs@pserver.samba.org:/cvsroot login cvs -z5 -d :pserver:cvs@pserver.samba.org:/cvsroot co samba Are there any other commands I could tack on or something I should do differently to make sure I am getting correct rebuilds? For example, should I tack on at the end: cd