similar to: Clique-Method-Package-Help

Dear R Users, I am looking clique a graph technique, to identify the values from the dataset. I tried with help.search("graph") it show's the graphics related stuff Is there any package that i can use to find Clique in a dataset? Thanks in Advance JJ -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University Sains Malaysia [[alternative

Again i have problem in locating the package for clique-graphs I tried with BioConductor under Browse for packages, it doesn't work atall. Kindly guid me Thanks JJ On 8/23/06, Seth Falcon <sfalcon@fhcrc.org> wrote: > > "j.joshua thomas" <researchjj@gmail.com> writes: > > > Dear Robert, > > > > Thanks for your time. > > I have

Dear Group I have few errors while installing package rattle from CRAN i do the installing from the local zip files... I am using R 2.4.0 do i have to upgrade to R2.4.1 ? ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utils:::menuInstallLocal() package 'rattle' successfully unpacked and MD5 sums checked updating HTML package descriptions > help(rattle) No

I have used RODBC to get the database i can view the tables in RGUI-2.4.1 how can i query the records in R> i tried with sqlQuery need some help JJ -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University Sains Malaysia -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University Sains Malaysia [[alternative HTML version deleted]]

Dear Robert, Thanks for your time. I have downloaded Rgraphviz (windows binary) from www.bioconductor.org and put inside R2.3.0 library then i installed from the local zip its says package 'graph' couldnot be loaded. Am i doing the installation correctly? Still the new user. Can you guide me sir? JJ -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University

Dear Group, I am looking for a package that is going to help me on Data preprocessing methods in Datamining. Is there any package in R2.4.0 to support DM? or what is the suitable package that i can adopt do the work? Kindly need your assistance. Thanks & Regards JJ --- -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University Sains Malaysia [[alternative

Dear R Users, It works fine. while i read the dataset from the text file. (refered R-data import -export*.pdf) > read.table("c:\\DataES.txt") V1 V2 1 ACW261 33 2 ACW311 7 3 ACW321 31 4 ACW342 39 5 6 7 Now my question is how do i /*convert text file Data into *.RData* which i can use as a dataset/data.matrix whereby i can use it for clusplot. Thanks in Advance, JJ ---

Hi All, These are the code that i used to plot the kmeans clustering. DataSetS01022<-rbind(matrix(rnorm(50),ncol=2), + matrix(rnorm(50),ncol=2)) > colnames(DataSetS01022) <-c("timeslot","em") > (cl <-kmeans(DataSetS01022,2)) >plot (DataSetS01022, col=cl$cluster) > points(cl$centers, col = 1:2, pch = 8, cex=2) Now, i would like to do *the same process

I am using R2.4.1 and using Rattle() Rattle() --> Explore--> GGobi I need to save the Scatter plot matrix in any type of image format. But it save as *.xml file how can i reterive the *.xml into *.bmp or *.png? I have tried the Export button in Rattle() not much options. Need the group help JJ -- Lecturer J. Joshua Thomas KDU College Penang Campus Research Student, University Sains

Dear List RGui Version : 2.3.0 User : 1 month I am having the *dendrogram plotting problem * The code i tried: >library(cluster) DD<-DataSetS01022 # 575 x 2 matrix > VC<-hclust(dist(DD),"ave") *Warning message: NAs introduced by coercion* ( what does it mean? Is that the problem?) > plot(VC,hang=-2) Output: http://roughjade.blogspot.com Can anyone guide me? Thanks

I am using R2.4.1 calling a text file contains the following data structure: when i call the file into R using tData<-read.table("c:\\test.txt") it gave me Error saying, irregular column in the data set however i need to use the below type of data Is there any alternative in R? ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 0010 0028 0061 0088 0010 0042 0084 0004 0010 0055 0010 0018 0040 0042

Dear List, My dataset is as below: I am using library(cluster) hierarchical clustering on these data. If i try to plot these i couldn't see the partitions clearly, please find the link on the plot : http://roughjade.blogspot.com Could anyone give me some suggesstions. AAP326 29 AAW315 37 AAW321 24 AAW322 7 AAW331 22 ACE381 22 ACP112 21 ACP212 24 ACP251 26 ACP321 31 ACW102 39

Dear List, My dataset is as below: I am using library(cluster) hierarchical clustering on these data. If i try to plot these i couldn't see the partitions clearly, > dd<-hclust(dist(DataSetS01022Full), "ave") > Warning message: >NAs introduced by coercion >(dn<-as.dendrogram(dd)) >plot(dn) please find the link on the plot : http://roughjade.blogspot.com

library(RGtk2) library(rattle) rattle() click the ODBC option it as the DSN i am a bit confused with this i already put my *.mdb file in C:drive i try put the DSN name as Microsoft Access driver, in the appropriate text box but i couldnt locate the table i tried the other way round open-> locate the *.mdb in C:drive couldnt locate i tried RODBC aswell, but i want to use rattle to Data mine

Hi All, I am using RGui 2.3.0 library(stats) and using K-means Clustering to cluster data.matrix.(DDset) DDset (matrix 575 x 2) Exams (character) Slot (numeric) AAW326 35 BWA345 45 ............... ..... ZXE 453 67 DDset[,2] [1] 29 37 24 7 22 22 21 24 26 31 39 21 17 7 24 37 26 33 7 31 39 29 24 20 2 [26] 40 8 16 1 31 6 32 2

Dear Group, I have followed the instructions from the link http://datamining.togaware.com/survivor/Installing_GTK.html However i couldn't fix the libatk01.0.0.dll application error Here, i did uninstall R-Gui-2.4.0 then did the fresh installation and still facing the same problem I am using Windows- XP *Please find the following* R version 2.4.0 (2006-10-03) Copyright (C) 2006 The R

Hi, I have the chromosome results in a text file. My problem is how to call the textfile values inside R' so that i can plot. Anyone can help me!! J.Joshua Thomas Lecturer Computing & Information systems KDU College Penang Campus Malaysia

Hi, Nuno and Arnold: Thank you all for the input. Let me coin a term, say "clique" for this discussion to avoid unnecessary confusion. A clique is statically or dynamically allocated type-free stretch of memory. A "clique" 1) is maximal in the sense that a clique dose not have any enclosing data structure that can completely cover or, partially

On Feb 27, 2013, at 12:37 PM, Shuxin Yang <shuxin.llvm at gmail.com> wrote: > Hi, Nuno and Arnold: > > Thank you all for the input. > > Let me coin a term, say "clique" for this discussion to avoid unnecessary confusion. > A clique is statically or dynamically allocated type-free stretch of memory. A "clique" > 1) is maximal in the sense

Hi there, I am doing some network analysis working with k-cliques and over time I want to see what nodes are members of what cliques and how big these cliques are. I have managed to produce a matrix which shows which k-cliques each node is part of over the 100 time periods (slow though) but I cannot seem to calculate the size of each k-clique which is actually just a count. Basically I have a