similar to: JGR doesn't launch after updating to R 2.2.1

Dear r-helpers, When I pull down the Packages:Package Installer menu, I get: ================================== > installPackages() stack imbalance in .External, 22 then 66 stack imbalance in <-, 20 then 64 stack imbalance in <-, 117 then 118 stack imbalance in {, 115 then 116 stack imbalance in if, 113 then 114 stack imbalance in {, 111 then 112 stack imbalance in <-, 105 then 106

library(glmmADMB) #Example for glmm.admb data(epil2) glmm.admb(y~Base*trt+Age +Visit,random=~Visit,group="subject",data=epil2,family="nbinom") Gives: Error in glmm.admb(y ~ Base * trt + Age + Visit, random = ~Visit, group = "subject", : The function maximizer failed ****************** R version 2.4.1 RC (2006-12-14 r40181) powerpc-apple-darwin8.8.0 locale: C

Dear r-helpers, Could you please help me solve the following problem: When I run require(AlgDesign) trt <- LETTERS[1:5] blk <- 10 trtblk <- 3 BIB <- optBlock(~., withinData = trt, blocksizes = rep(trtblk, blk)) In response to the last command, R complains: Error in optBlock(~., withinData = trt, blocksizes = rep(trtblk, blk)) : object ".Random.seed" not found The

> (fm1 <- lmer2(Reaction ~ Days + (Days|Subject), sleepstudy)) Error in as.double(start) : Calloc could not allocate (888475968 of 4) memory ************************* > sessionInfo() R version 2.4.1 (2006-12-18) powerpc-apple-darwin8.8.0 locale: C attached base packages: [1] "grid" "datasets" "stats" "graphics" "grDevices"

Dear r-helpers, When I do an xYplot and display the result in a JavaGD() window, the font is sans-serif (presumably Helvetica). When I send the figure to a pdf, I get a serif font (presumably times). How do I insure that the font in the pdf is indeed the default sans serif? > sessionInfo() R version 2.4.1 (2006-12-18) i386-apple-darwin8.8.1 locale: C attached base packages: [1]

Dear R-helpers, I don't see a difference between the following two plots of effect objects, which I understand should be different. What am I missing? require(doBy) require(effects) data(budworm) m1 <- glm(ndead/20 ~ sex + log(dose), data=budworm, weight=ntotal, family=binomial) m1.eff <- all.effects(m1) plot(m1.eff, rescale.axis = FALSE, selection = 2, main = 'rescale =

Dear R-helpers, When I try > anova(txtE2.lme, txtE2.lme1) Model df AIC BIC logLik Test L.Ratio p-value txtE2.lme 1 10 8590 8638 -4285 txtE2.lme1 2 7 8591 8624 -4288 1 vs 2 6.79 0.0789 > latex(anova(txtE2.lme, txtE2.lme1)) Error: object "n.group" not found I don't even see n.group as one of the arguments of latex() I checked to see >

Dear R-helpers, In JGR: jpeg() Error in X11(paste("jpeg::", quality, ":", filename, sep = ""), width, : unable to start device JPEG In addition: Warning message: unable to open connection to X11 display '' > sessionInfo() Version 2.3.1 (2006-06-01) powerpc-apple-darwin8.6.0 attached base packages: [1] "grid" "datasets"

Dear r-helpers, I wonder if you can figure out why the following is working: ******************************************************************** > sessionInfo() Version 2.3.1 (2006-06-01) powerpc-apple-darwin8.6.0 attached base packages: [1] "tcltk" "methods" "stats" "graphics" "grDevices" "utils"

Dear R-helpers, In JGR, how to I get the help() to update when I install a new package? > sessionInfo() Version 2.3.1 (2006-06-01) powerpc-apple-darwin8.6.0 attached base packages: [1] "datasets" "methods" "stats" "graphics" "grDevices" "utils" "base" other attached packages: lattice MASS

I recently updated R on Linus/SuSE 11.1 I complained because no on-line help was available from JGR after R update. I was told to update JGR as well. How can I do that ? I installed JGR on SuSE three times in the past with different R versions.Every time it's been a nightmare. I am afraid to have to spend a whole day, maybe longer, to update JGR ... I would greatly appreciate some clear

I have updated R 2.9.1 to 2.10.0. and JGR GUI 1.7. I am running Windows XP. I can't seem to get the JGR "Print" or "Help" functions to work. The system locks and requires me to "stop the process". In the past I have preferred the opreation and "feel" of JGR GUI. I realize that this help forum is for R; but, I am hoping that some other R-user is

Hello, I cannot get JGR installed. Here is what I have tried so far http://wiki.ubuntuusers.de/R 1. sudo -s # root werden R CMD javareconf root at gunnar-laptop:~# R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.5.0_18 Java home path : /usr/lib/jvm/java-1.5.0-sun-1.5.0.18/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive

Here's the problem: on Windows, the 'jgr.exe' tool starts up by checking for a connecting to the 'net in order to grab the support packages. Well, we have machines at work that are not and never will be connected to the Internet. I tried manually installing all the packages (JGR, Rjava, etc) but the jgr.exe still tries to find a connection. Is there any way around this?

iMac Intel Core Duo; OS X 10.4.8; Java 1.5.0_06; R 2.4.1; JGR 1.4-14; rJava 0.4-12; iplots 1.0-5 I'm unable to get JGR or iplots to load using "library(JGR)" or "library(iplots)", respectively. This feels like it might be a classpath or Mac look-and-feel issue, but I'm not sure where to go with it at this point. I've searched the fora and web to no avail. Any

After upgrading to R 2.10 and upgrading and testing JGR 1.7, I and other Ubuntu users are getting repeated error messages in JGR that look like this: > Error: could not find function ".getModels" Error: could not find function ".getDataObjects" Error: could not find function ".getOtherObjects" Error: could not find function ".getFunctionsInWS" The

Hi, anybody have a JGR launcher for linux? Maybe a script that launch JGR directly without open R then library(JGR) and JGR(). Thanks Ronaldo -- Deflector shields just came on, Captain. -- > Prof. Ronaldo Reis J?nior | .''`. UNIMONTES/Depto. Biologia Geral/Lab. Ecologia Evolutiva | : :' : Campus Universit?rio Prof. Darcy Ribeiro, Vila Mauric?ia | `. `'` CP: 126, CEP:

Hi All, I am trying to install JGR GUI for R (windows xp) but facing the problem. The following error message is displayed when I click on JGR.exe "Cannot find Java/R Interface (JRI) library (jri.dll) Please make sure you start JGR by double clicking the JGR.exe program" I know this is R help forum, but trying to get help from experts who are using JGR. Any help or idea will be

Full_Name: Erik Lukac Version: R version 2.8.1 (2008-12-22) OS: Mac OS 10.5 Submission from: (NULL) (141.84.28.167) I tried to install JGR, but somehow it doesnt work. > install.packages("JGR") Warning in install.packages("JGR") : argument 'lib' is missing: using '/Users/erikl/R/i386-apple-darwin9.6.0-library/2.8' trying URL

when i double click JGR.exe, it show " Can't Find Java/R interface (JRI)..." my R version is R 2.12.0. Did anyone know how to install the JGR? -- View this message in context: http://r.789695.n4.nabble.com/JGR-install-problem-tp3039013p3039013.html Sent from the R help mailing list archive at Nabble.com.