Displaying 20 results from an estimated 5000 matches similar to: "Help with R: functions"
2006 Mar 07
1
lme and gls : accessing values from correlation structure and variance functions
Dear R-users
I am relatively new to R, i hope my many novice questions are welcome.
I have problems accessing some objects (specifically the random effects, correlation structure and variance function) from an object of class gls and lme.
I used the following models:
yah <- gls (outcome~ -1 + as.factor(Trial):as.factor(endpoint)+
2006 Mar 03
1
Help with lme and correlated residuals
Dear R - Users
I have some problems fitting a linear mixed effects model using the lme function (nlme library). A sample data is as shown at the bottom of this mail. I fit my linear mixed model
using the following R code:
bmr <-lme (outcome~ -1 + as.factor(endpoint)+ as.factor(endpoint):trt, data=datt,
random=~-1 + as.factor(endpoint) + as.factor(endpoint):trt|as.factor(Trial),
2006 May 16
2
query: lme
Dear R Users
I have difficulties accessing the variance components for an lme fit when the variance covariance matrix of the random effects is not positive definite.
Can anyone inform me on how to get by this ?
Thanks in advance
Pryseley
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2006 Jun 28
3
lme convergence
Dear R-Users,
Is it possible to get the covariance matrix from an lme model that did not converge ?
I am doing a simulation which entails fitting linear mixed models, using a "for loop".
Within each loop, i generate a new data set and analyze it using a mixed model. The loop stops When the "lme function" does not converge for a simulated dataset. I want to
2006 Jun 01
2
Help: lme
Good day R-Users,
I have a problem accessing some values in the output from the summary of an lme fit.
The structure of my data is as shown below (I have attached a copy of the full data).
id trials endp Z.sas ST
1 1 -1 -1 42.42884
1 1 1 -1 48.12007
2 1 -1 -1 43.42878
2 1 1 -1
2006 Mar 02
0
Help with lme code
Dear R - Users
I have some problems fitting a linear mixed effects model using the lme function (from the library nlme). A sample data is as shown at the bottom of this mail. I fit my linear mixed model using the following R code:
bmr <-lme (outcome~ -1 + as.factor(endpoint)+ as.factor(endpoint):trt, data=datt,
random=~-1 + as.factor(endpoint) +
2006 Feb 01
1
Help with functions
Dear R-users
I intend to create a function which calls some smaller other functions in return. Some of these smaller functions all call some functions. I do not know a good way to do this. I tried using the source() function to include the smaller functions within the main functions before they are called. This does not work, or maybe i am not doing the right thing.
For example:
the
2006 Mar 15
1
Log Cholesky parametrization in lme
Dear R-Users
I used the nlme library to fit a linear mixed model (lme). The random effect standard errors and correlation reported are based on a Log-Cholesky parametrization. Can anyone tell me how to get the Covariance matrix of the random effects, given the above mentioned parameters based on the Log-Cholesky parametrization??
Thanks in advance
Pryseley
2006 Mar 07
1
Three level linear mixed models
Hello R-users
Is it possible to fit a three level linear mixed effect model in R?
If anyone has an idea or sample code, i will appreciate it very much if i can receive it.
I am reading the book by Pinheiro and Bates but have not come across that yet!
Kind regards
Pryseley
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2006 May 08
1
Pairewise Likelihood
Dear R-users
Can anyone inform me of a library or more specifically functions that can maximise (or calculate) a Pairwsie likelihood from a data.
Better still, i would like to know if there is a function (library) that fits regression models based on pairwise likelihoods.
Thanks
Pryseley
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2006 Sep 28
1
Plackett-Dale Model in R
Dear R users,
Can someone inform me about a library/function in R that fits a Plackett-Dale model ?
Thanks in advance
Pryseley
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2006 May 30
1
Query: lme output
Dear R-Users
I have a problem accessing some values in the output from the summary of an lme fit.
I fit the model below:
ggg <- lme (ST~ -1 + as.factor(endp):Z.sas + as.factor(endp), data=dat4a,
random=~-1 + as.factor(endp) + as.factor(endp):Z.sas|as.factor(trials),
correlation = corSymm(form=~1|as.factor(trials)/as.factor(id)), weights=varIdent(form=~1|endp))
hh
2023 Jul 28
1
check_account: Failed to find local account with UID" issue / The university of Chicago
On Fri, 2023-07-28 at 19:55 +0000, Himanshi Yadav via samba wrote:
> Jul 28 09:18:51 midway3-dm1.rcc.local winbindd[1056745]:??? #15 /lib64/libtevent.so.0(tevent_common_loop_immediate+0x27) [0x7fbf521f6ca7]
> Jul 28 09:18:51 midway3-dm1.rcc.local winbindd[1056745]:??? #16 /lib64/libtevent.so.0(+0xed2f) [0x7fbf521fcd2f]
> Jul 28 09:18:51 midway3-dm1.rcc.local winbindd[1056745]:??? #17
2006 Jan 18
2
Help with mixed effects models
Dear R-users
I have problems using lme
The model i want to fit can be viewed as a two-level bivariate model
Two-level bivariate: bivariate (S coded as -1,T coded as 1) endpoint within trial
OR
It can equivalently be considered as a three-level model.Three-level: endpoint within patient, patient within trial.
My code tries to model the levels through a RANDOM statement and a
2004 Oct 02
1
RCC compatibility patch
Would you consider the following patch to eval.c to allow compatibility
with RCC? (It's in the applyClosure function.)
@@ -432,6 +432,14 @@
SEXP f, a, tmp;
RCNTXT cntxt;
+#ifdef RCC
+ SEXP comp;
+ PROTECT(comp = getAttrib(op, install("RCC_CompiledSymbol")));
+ if (comp != R_NilValue) /* compiled version exists */
+ op = comp;
+ UNPROTECT(1);
+#endif
2023 Jul 28
1
check_account: Failed to find local account with UID" issue / The university of Chicago
Hi Experts,
We encountered a weird issue after restarting the server. Seems everything working fine on the configuration side but the user?s not able to authenticate with the Samba server. Can you please help to investigate the issue?
Our setup details and configuration file + error logs + service status.
Samba:- 4.18.3-0
CentOS Linux release 8.4.2105
Authentication mechanism is SSSD
[root at
2012 Mar 19
2
fitted values with locfit
Dear memberships,
I'm trying to estimate the following multivariate local regression model using the "locfit" package:
BMI=m1(RCC)+m2(WCC)
where (m1) and (m2) are unknown smooth functions.
My problem is that once I get the regression done I cannot get the fitted values of each of this smooth functions (m1) and (m2). What I write is the following
library(locfit)
data(ais)
2020 Mar 08
6
System Time
A few years ago, one of our interns was curious about system
time keeping features in computer systems.? This intern was
also the proud owner of an inexpensive Radio-Controlled Clock.
The intern wondered why computer motherboards were not just
equipped with a chip like the ones in the RCC so that their
system time would always be correct.
I posted a question about this on the CentOS email list
2005 Feb 06
3
Re : TC GUI or graphs?
Deepak, i think you can look to this option too :
http://sourceforge.net/projects/rcc/
The project is in developpment....but within 1 or 2 weeks i think it
will be a good project....especially who linux network''s owner.
rgds,
Erwan le Doeuff
_______________________________________________
LARTC mailing list / LARTC@mailman.ds9a.nl
http://mailman.ds9a.nl/mailman/listinfo/lartc HOWTO:
2016 Oct 12
2
Re: Fwd: Problems connecting to the libvirtd server
On 11.10.2016 18:39, Stefano Ricci wrote:
> ---------- Forwarded message ----------
> From: Stefano Ricci <sfn.rcc@gmail.com>
> Date: 2016-10-11 12:35 GMT+02:00
> Subject: Re: [libvirt-users] Problems connecting to the libvirtd server
> To: Michal Privoznik <mprivozn@redhat.com>
>
[Please don't top post on technical lists]
>
> There is not AppArmor and