Displaying 20 results from an estimated 5000 matches similar to: "command in survival package"
2015 Dec 07
3
Tiempo de vida
Buenas,
Como pudeo calcular el tiempo de vida? Os cuento, tengo una serie de cuchillas y quiero ver el consumo de las mismas y he pensado en hacer un estudio por tiempo de vida. No se como hacerlo con R
Gracias
Jesús
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2010 Dec 27
1
Problem using pkg "survival"
Hello all.
I've been attempting to utilize the "survival" pkg (
http://cran.r-project.org/web/packages/survival/index.html), while reading
through this guide (http://www.ms.uky.edu/~mai/Rsurv.pdf). I figured working
through the guide would be the best way to go, before attempting my own
data.
I tried to utilize the Kaplain-Meier estimator as shown in the guide:
2008 Dec 06
1
Kaplan-Meier function from survfit
Hi All,
Please pardon me if I am missing something obvious here. How do I get
the Kaplan-Meier estimate function that is created by survfit and
plotted by the code.
fit <- survfit(Surv(time, status) , data=aml)
plot(fit)
That is, I need a function that will give me the survival estimate at
a given time: \hat{S}(t).
Thanks in advance.
Ritwik Sinha
ritwik.sinha at gmail.com | +12033042111 |
2015 Dec 07
2
Tiempo de vida
Los datos no son de desgaste de cuchilla, sino de consumo de las mismas.
Por ello tengo los datos de la siguiente forma:
Unidades cambiadas Fecha
En unidades cambiadas, suele ser una y en fecha el dia que se hizo el cmabio.
Con eso no se muy bien como estructurar los datos para hacer el análisis.
Gracias
Jesús
> Date: Mon, 7 Dec 2015 16:27:18 +0100
> From: griera en yandex.com
2009 Feb 17
3
Survival-Analysis: How to get numerical values from survfit (and not just a plot)?
Hi!
I came across R just a few days ago since I was looking for a toolbox
for cox-regression.
I?ve read
"Cox Proportional-Hazards Regression for Survival Data
Appendix to An R and S-PLUS Companion to Applied Regression" from John Fox.
As described therein plotting survival-functions works well
(plot(survfit(model))). But I?d like to do some manipulation with the
survival-functions
2010 Sep 10
2
survfit question
Hi,
I am attempting to graph a Kaplan Meier estimate for some claims using the survfit function. However, I was wondering if it is possible to plot a cdf of the kaplan meier rather than the survival function. Here is some of my code:
library(survival)
Surv(claimj,censorj==0)
survfit(Surv(claimj,censorj==0)~1)
surv.all<-survfit(Surv(claimj,censorj==0)~1)
summary(surv.all)
plot(surv.all)
2004 Apr 21
1
Boot package
Dear mailing list,
I tried to run the example for the conditional bootstap written in the help file
of censboot. I got the following result:
STRATIFIED CONDITIONAL BOOTSTRAP FOR CENSORED DATA
Call:
censboot(data = aml, statistic = aml.fun, R = 499, F.surv = aml.s1,
G.surv = aml.s2, strata = aml$group, sim = "cond")
Bootstrap Statistics :
original bias std. error
t1*
2004 Oct 05
2
Nelson-Aalen estimator in R
Hi,
I am taking a survival class. Recently I need to do the Nelson-Aalen
estimtor in R. I searched through the R help manual and internet, but could
not find such a R function. I tried another way by calculating the
Kaplan-Meier estimator and take -log(S). However, the function only
provides the summary of KM estimator but no estimated values. Could you
please help me with this? I would
2006 Jul 11
2
new object
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2009 Feb 20
1
log-minus-log plot
Dear experts,
I would like to know how to plot the log-minus-log plot for survival
analysis (to check the proportional assumption) in R.
Using the AML example.
fit <- survfit(Surv(time, status) ~ x, data=aml)
length(fit$surv) #20
as the length of fit$surv is shorter than aml$x and aml$time. I don't
know how to plot.
Thank you.
Regards,
CH
--
CH Chan
Research Assistant - KWH
2009 Jan 14
2
Kaplan-Meier Plot
dear all,
I want to plot a kaplan Meier plot with the following functions, but I fail
to produce the plot I want:
library(survival)
tim <- (1:50)/6
ind <- runif(50)
ind[ind > 0.5] <- 1; ind[ind < 0.5] <- 0;
MS <- runif(50)
pred <- vector()
pred[MS < 0.3] <- 0; pred[MS >= 0.3] <- 1
df <- as.data.frame(cbind(MS, tim, pred, ind))
names(df) <-
2006 May 05
2
How to access results of survival analysis
Hi List,
A friend of mine recently asked the same question as Heinz T?chler. Since
I've already written the code I'd like to share with the list.
# x is an object returned by "survfit";
# "smed" returns a matrix of 5 columns of
# n, events, median, 0.95LCL, 0.95UCL.
# The matrix returned has rownames as the
# group labels (eg., treatment arms) if any.
smed <-
2015 Dec 08
2
Tiempo de vida
Pero como haría el data frame?? Porque las cuchillas son de la misma referencia. En realidad es para ver cada cuanto se gstan las cuchillas y ver que pedidos hay que hacer de las mismas.
La tabla que tengo es:
25 enero-> 1 cuchilla gastada
30 enero -> 1 cuchilla gastada
3 de febrero -> 2 cuchillas gastadas
5 de febrero -> 1 cuchilla gastada
Y así....
No tiene necesariamente que ser
2020 Sep 29
5
2 KM curves on the same plot
Hello,
Can anyone suggest a simple way to generate a Kaplan-Meier plot with 2 survfit objects, just like this one:?
https://drive.google.com/file/d/1fEcpdIdE2xYtA6LBQN9ck3JkL6-goabX/view?usp=sharing
Suppose I have 2 survfit objects: fit1 is for the curve on the left (survtime has been truncated to the cutoff line: year 5), fit2 is for the curve on the right (minimum survival time is at the
2000 May 03
1
log-log plots
Hi,
I am conducting a survival analysis and I have been trying, with not success, to do a log-log survival plots.
Does anyone know how to do it in R?
By the way I am using version 1.0.0 for windows.
Many Thanks
Marco
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2006 May 24
2
median of a survfit object
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2009 Nov 06
1
Survival Plot in R 2.10.0
I would like to produce a complimentary log-log survival plot with
only the points appearing on the graph. I am using the code below,
taken from the plot.survfit page of help for the the survival package
(version 2.35-7).
I am running in R 2.10.0 on Windows XP, and the list of packages
following
the error is loaded. Is there some specific 'type= ' syntax, or an
additional parameter
that
2003 Jan 16
1
help drawing kaplan-meier plot starting from 0
Dear help news reader,
I'm trying to draw a Kaplan-Meier curve and would like to ask the news
group for some help
Supposing I have study comapring two drugs, "A", and "B" and I recorde the
time to get to the clinical endpoint (Time), in my case becommming virus free.
I have setup the following frame:
Time c Drug
1 5 1 A
2 7 1 B
3 2 1 A
4 10 1
2010 Sep 23
2
extending survival curves past the last event using plot.survfit
Hello,
I'm using plot.survfit to plot cumulative incidence of an event.
Essentially, my code boils down to:
cox <-coxph(Surv(EVINF,STATUS) ~ strata(TREAT) + covariates, data=dat)
surv <- survfit(cox)
plot(surv,mark.time=F,fun="event")
Follow-up time extends to 54 weeks, but the last event occurs at week
30, and no more people are censored in between. Is there a
2006 Dec 13
1
Passing arguments to panels in trellis plots
Dear all,
I am trying to produce survfit plots in a trellis environment and I
would like the plots to be logarithmic.
I am trying this:
print(Ecdf(~time | size*type, groups=alg,data=B,subscripts=TRUE,
panel=function(x,groups,subscripts)
{
t <- survfit(Surv(time[subscripts],event[subscripts])~groups[subscripts],data=B)