similar to: barplot(2?) with CI from a zero reference line

Dear All I am trying to graph a proportion and CI95% by a factor with ooplot (any other better solution ?) It works well until I try to add the confidence interval. this is the error message and and a description of the data: > dat1 PointEst TT1 1 3.6 TT2 2 5.0 TT3 3 5.8 TT4 4 11.5 TT5 5 7.5 TT5 6 8.7 TT7 7 17.4 > dat2

I am using barplot, and barplot2 in the gregmisc bundle, in the following way: barplot2(sort(xtabs(expend / 1000 ~ theme)), col = c(mdg7, mdg8, mdg3, mdg1), horiz = T, las = 1, xlab = "$ '000", plot.grid = T) The problem is that the values of 'theme', which is a factor, are in some cases rather long, so that I would like to wrap/split them at a space once they

Hello, I try to handle a simple bar-plot, but it turns out to be not as simple as I thought. 1) I have created a .dat-File, e.g. test.dat: DATA DATA-SEM 2.2 0.32 6.2 1.30 12.7 1.61 48.6 3.08 4.1 0.86 4.5 0.32 1.5 1.13 1.2 1.08 The first row is the data represented by bars. The second row deals with the Standard Error of Mean. The lines correspond to time-intervals of experiments. 2) I now

Dear All, I have the following data coming out from s <- with(final, summarize(norm, llist(gtt,fdiab), function(norm) { n <- sum(!is.na(norm)) s <- sum(norm, na.rm=T) binconf(s, n) }, type='matrix') ) ie gtt fdiab norm.norm norm.norm2 norm.norm3 18

Hello everyone! I need to include the confidence interval bar in a grouped barplot. I've found some options on the web, but none of them solved my problem. The question is: my barplot was created using vectors for each pair of bar and them combining them using cbind. I mean: a=c(10,15) b=c(20,24) c=c(21,23) ... hei=cbind(a,b,c) graph1=barplot(hei, beside=T,...) I've tried to include

R-Users, Hopefully someone can shed some light on these questions as I had little luck searching the archives (although I probably missed something in my search due to the search phrase). I estimated multinomial probabilities for some count data (number successful offspring) ranging from 0 to 8 (9 possible response categories). I constructed a barplot (using barplot2) and I want to

I need to increase the width of the border in a barplot, i checked both barplot, and barplot2, but cant find how to do it. how can I do? thank you john [[alternative HTML version deleted]]

I want to include missing values in my barplot to get the correct x-axis, for example, x <- c(1,2,3,4, 9) y <- c(2,4,6,8,18) barplot(y) The above looks wrong because the last height in y should be a long way over. So I want to do something like... x <- c(1,2,3,4,5,6,7,8, 9) y <- c(2,4,6,8,0,0,0,0,18) barplot(y) However... I am actually using barplot2 to use the

R-Users, I am working with gplots (in gregmisc bundle) plotting some posterior probabilities (using barplot2) of harvest bag limits for discrete data (x-axis from 0 to 12, data is counts) and I ran into a couple of questions whose solutions have evaded me. 1) When I create and include the confidence intervals, the lower bound of the confidence intervals for several of the posterior probabilities

I have a file in the following format: Scenario1 Scenario1CIL Scenario1CIU Scenario2 Scenario2CIL Scenario2CIU 60 57 62 45 48 50 110 101 111 51 50 52 120 117 122 64 62 66 192 190 194 79 75 79 where: First column = Scenario1 mean value Second column = Scenario1 Low Confidence Interval Third column = Scenario1 Upper Confidence Interval Fourth column = Scenario2 mean value Fifth column =

I have a barplot I have created using barplot2 and I have been able to add points and lines (using the points and lines methods, respectively). I now need to add some polygons (triangles in particular), that I want to be shaded to match bars in the plot. I can get the coordinates of the corners of the triangles, but don't know how to draw the triangles. I know there is the grid.polygon

Hello, I have got a simple "cosmetic" question. I have created a bar plot with confidence intervals using: barplot(mean, ylim = c(0,0.2), las = 3, space = 0) arrows(1:17 ,X95p_low, 1:17, X95p_high, length = 0.07, angle = 90, code = 3, lty = 1) Unfortunately, the confidence bars align with the right side of the bars and I would like to shift these to the middle of the bars. Is

To all, Recently I created a version of barplot() to include some new features as follows: 1. Plot confidence intervals for each bar: The user can pass lower (ci.l) and upper (ci.u) bounds in the same vector/matrix format as "height". The CI boundary lines will vary in width per bar, if a varying "width" argument is specified. CI line width, type and color can be

Hello, On my barplot, I have on the axis y, the names of the rows of my matrix r_mat! is it possible to change the color of these names on my barplot? barplot2(t(r_mat),beside=TRUE,horiz=TRUE,plot.grid=TRUE,xlab="R",font.lab=4,las=2,xlim=c(0,1)) thanks, Sabine --------------------------------- [[alternative HTML version deleted]]

Here is an example barplot that needs some tweaking: library(gplots) ratios <- data.frame(c(0.05,0.10,0.9),c(0.06,0.15,0.76)) rownames(ratios) <- c("T1","T2","T3") colnames(ratios) <- c("A1","A2") ratios <- as.matrix(ratios) myplot <- barplot2(ratios, beside = TRUE,col = c("blue",

I want to obtain a barplot with error bars and a mean plot with error bars with other scale on the left in the same plot. I need help to get the same x axis (centered) when overlay two plots (barplot2 and plotCI (or lineplot.CI) with errorbars), with diferent y axis. I use par (new=T) but the X axis names are not centered with the figures. An example of my data:

Hello, I get a nice looking barplot using the barplot2 function in the gregmisc package: body2 <- barplot2(hh3, beside = TRUE, col = c("mistyrose", "lightcyan"), .... cex.names = 1.0, plot.ci = TRUE, ci.l = cil, ci.u = ciu, plot.grid = TRUE) box() However, obviously I lose the collors when converting from ps to a pdf (outside of R)

Hi list, I'm using barplot2 form the gplots package to plot a few numbers (I want to add SD bars later). However, I would like the y-axis not to start from 0 but 500. When I add the parameters YLIM, something goes wrong. The graph is not 'cut off' at 500. Instead the bars seems to sink trough the bottom of the graph. Because its a little hard to explain, here is a self-containing

I'm using barplot2 to plot some data. Is there any way to determine the width of the bars in the generated plot? I know that barplot2 returns a list of the coordinates of the center of each bar, but since there is some white space between each bar, I don't know how to get the width of each bar. Jamie

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment: