similar to: gplot.hexbin - how to set figure margin.

I can save to png, TIFF and jpg but get an error "Error: invalid graphics state" when trying to save as pdf and I have to restart R. This happens when I add mtext lines. There are a few other questions e.g. I want to move the mtext on side 1 to the left, but that is the main issue for now. I'm not using the ylab inside gplot.hexbin because it writes over the numbers on the axis.

[cc'd to package maintainer] This feels like a fairly straightforward question, so I'm surprised not to have found an answer so far (RSiteSearch, package help, vignette ...) It seems fairly hard (without some fairly serious hacking) to hard-code the axis limits in a hexbin plot from the hexbin package. Here's what I've figured out so far: * when you do the hexagonal

Dear all, I am trying to use hexbin and read the very interesting article on grid ( http://www.ci.tuwien.ac.at/Conferences/useR-2004/Keynotes/Murrell.pdf ) and am hoping for some advice from more experienced users of hexbin. I am trying to visualise a data and fit a straight line trough it. For example, here is how I would do it in the usual way # simulate data x <- rnorm(1000) y <-

Hi, I am trying to create a plot with pairs() using a gplot.hexbin() for each pair. For pairs I can provide a custom upperPanel function: pairs(iris[1:4], panel=mypanel) and mypanel() calls plot.hexbin(): library(hexbin) # Bioconductor mypanel <- function(x, ...){ hb <- hexbin(x) plot(hb) } The problem is that gplot.hexbin() is based on the

Hi all! I'm trying to save an output of the HEXBIN process... is so much data (105k), and I need to export to an ASCII file. I tried to use: write.table() ----> Error in as.data.frame.default(x[[i]], optional = TRUE) : cannot coerce class 'structure("hexbin", package = "hexbin")' into a data.frame cat() ---> Error in cat(list(...), file, sep, fill,

Dear All i am trying to figure out the use of hexbin function in the hexbin package --can any one send me a working example of the same The > example(hexbin) ---option is of not much use Thanks Kind regards Ravi [[alternative HTML version deleted]]

I have lots of data that I need to display, and I think hexbin would be good for it. However, I cannot load one of the requried packages associated with the hexbin package: > library(hexbin) Loading required package: colorspace Error in loadNamespace(package, c(which.lib.loc, lib.loc), keep.source = keep.source) : in 'colorspace' methods for export not found: [, coords, plot

Hi, I want to draw a scatter plot with 1M and more points and save it as pdf. This makes the pdf file large. So i tried to save the file first as png and than convert it to pdf. This looks OK if printed but if viewed e.g. with acrobat as document figure the quality is bad. Anyone knows a way to reduce the size but keep the quality? /E -- Dipl. bio-chem. Witold Eryk Wolski MPI-Moleculare

Dear maintainers and R-devel, Several orphaned CRAN packages are about to be archived due to outstanding QC problems, but have CRAN and BioC packages depending on them which would be broken by the archival (and hence need archiving alongside). Therefore we are looking for new maintainers taking over maintainership for one or more of the following packages: R2HTML SemiPar cghseg hexbin lgtdl

Greetings: I have multiple hexbin plots with varying greatest densities. Right now, the data on each plot varies from 1-256 levels of density. The problem with that is that in Plot A the data are more scattered across a 2 x 2 grid whereas in Plot B the data are more concentrated in fewer cells. Hence, Plot A has a few very dense grid cells and plot B has nothing as dense as plot A. (In Plot A

Hello, I would like some help to plot a vertical line on a scatterplot build with hexbin package. I just need to plot a vertical line on the graph to mark a threshold value on x axis. It would be better if the parameter of the plot line function respect the x axis scale. Thanks, Rodrigo [[alternative HTML version deleted]]

Hi, Drawing a legend I would like to be able to specify the color of boxes which are drawn if fill or density is specified. eg. legend(0,40000,c("raw","LR/PR-TPS"),fill=c(1,2),col=c(1,2),density=c(20,20),angle=c(-20,45),bty="n") Currently the color of the boxes -- border is always black and can *not* be changed. To get this option only a *minimal* change is

Hi all- So sorry to bother you all with something pretty basic. I am trying to add the lines method output from svysmooth to a svyplot with style="grayhex". However, the line either appears in the wrong place or if I am running in R Studio it causes the system to crash. I know this is something to do with Lattice graphics, but for the life of me I can not figure out how. Dr. Lumley

Hello everybody, I hope you can give me some help with limiting the ranges in x, y, and z for a hexbin plot. All I have found on the net is an unanswered message to this list from last year, so I hope my problem is not too stupid. I would like to plot some data using hexagonal binning. Currently, I am doing the following: library(hexbin) data<-scan("input.dat", what =

Hello. I'm trying to adapt the package ?hexbin? to suit my needs. This is the first time I do this. I've read a bit through Hadley's ?R packages?, but now I'm pretty lost (from a workflow point of view). I am using RStudio and Hadley's devtools. So I forked the repo I want to adapt: https://github.com/grssnbchr/hexbin and cloned it using RStudio (I created a new project).

Hello. I'm trying to adapt the package ?hexbin? to suit my needs. This is the first time I do this. I've read a bit through Hadley's ?R packages?, but now I'm pretty lost (from a workflow point of view). I am using RStudio and Hadley's devtools. So I forked the repo I want to adapt: https://github.com/grssnbchr/hexbin and cloned it using RStudio (I created a new project).

On 12/07/2016 7:28 AM, timo at timogrossenbacher.ch wrote: > Hello. > > I'm trying to adapt the package ?hexbin? to suit my needs. This is the first > time I do this. I've read a bit through Hadley's ?R packages?, but now I'm > pretty lost (from a workflow point of view). I am using RStudio and Hadley's > devtools. > > So I forked the repo I want to

Hi All - I'm having a layout problem with hexbin. The axis labels overlap with the axis tick labels. I've tried changing grid and trellis layout settings, as well as the more obvious mar settings without luck. Here's how to recreate the probem: require(hexbin) x <- abs(rnorm(500,500,500)) y <- jitter(x) bin <- hexbin(x,y,) srt=plot(bin,xlab="Average X Value",

Hello again, I am trying to plot out activity regions the user did on the screen via plotting a hexbin. I have 20 users whose information i want to plot out and it stops in the user 16 with the message Error in M[, 1] : incorrect number of dimensions. Any advice would be appreciated as i dont see why this error occurs on the data for the 16th user. All the other users get plotted out

Is it possible to convert an hexbin object like hexbin(rep(1:100,each=100),rep(1:100,100),xbins=10) and convert it to a vectorial (shp) format? Paulo ---------------------------------------------------------------------------- ------------------------------------------------- This electronic mail transmission including any attachment hereof, contains information that is private and confidential,