similar to: help with loops

hi: I have matrix with dimensions(200 X 20,000). I have another file, a tab-delim file where first column variables are row names and second column variables are column names. For instance: > tmat Apple Orange Mango Grape Star A 0 0 0 0 0 O 0 0 0 0 0 M 0 0 0 0 0 G 0 0 0 0 0 S 0 0 0 0 0

Hi: Apologies for asking the following question. As?this may sound very basic and stupid for this forum?, I honestly do not know how to solve it and I do not have a teacher who can help me understand. ? I have list of genes (200)?that are involved in a particular process and I call this as a?ProcSet.?? From an independent experiment I found that out of 10,000 genes, 1500 are significant and I

dear group, i have a data matrix with some replicate items with different values. I want to extract the row with max value. for example: > x fruit weight 1 apple 1.3 2 apple 1.5 3 apple 1.6 4 orange 1.4 5 orange 1.6 x is a data frame. I want to extract unique items from fruits that has max weight. that is: 3 apple 1.6 5 orange 1.6 I want to be able to use

It might be a bit faster to do matrix indexing: R> tbm <- as.matrix(tb) # turn it into a character matrix R> tmat[cbind(match(tbm[,2], rownames(tmat)), match(tbm[,1], colnames(tmat)))] <- 1 > tmat Apple Orange Mango Grape Star A 1 1 1 0 0 O 1 1 0 0 0 M 0 0 1 0 0 G 0 0 0 0 0 S 1 1 1 0

Dear Group, I have a data frame like the following: x <- c("Mike","A",0.01) x1 <- c("Carl","A",0.2) x2 <- c("Gene","C",0.3) x3 <- c("James","A",-0.3) x4 <- c("Dough","B",0) xx <- rbind(x,x1,x2,x3,x4) colnames(xx)<-c("Name","Class","NES") xx

Dear R-helpers, Lists in R are stumbling block for me. I kindly ask you to help me able to write a data-frame. I have a list of lists. > sls[1:2] $Andromeda_maya1 x y [1,] 369 103 [2,] 382 265 [3,] 317 471 [4,] 169 465 [5,] 577 333 $Andromeda_maya2 x y [1,] 173 507 [2,] 540 395 [3,] 268 143 [4,] 346 175 [5,] 489 91 I want to be able to write a data.frame like

I'm trying to export a large data frame to a text file for permanent storage. The only thing I could find was the treeglia Package but that didn't work. Any suggestions? Thanks! Christina D Smith PhD Student, GRA Statistics Department Kansas State University

Dear group, I have a data.frame (d1) with various elements and a matrix (m1) created with NA (or 1s). I want to read each row,column in d1 and fill its numeric value in m1. Could some one help me because I have 130K rows and 500 column data.frame object and I was told that a for loop will take a long time. Thank you. > r1 <- c("A","A","B","B")

Hello Group, What is the meaning of the error. is there any place to look for this. I guess 'atomic' seems to be OOP related concept. thank you srini

I have not had a great amount of success installing/updating packages from the "Packages" menu of Rgui under Windows XL. (Except for installing from loacal zip files.) But I am not asking for help in using these facilities because I prefer to keep a folder of package zip files. On the other hand I do find it tedious having to right-click "Save link as" on every individual

I hope this time I'm using the "iris" dataset correctly: ir <- rbind(iris3[,,1], iris3[,,2], iris3[,,3]) lir <- data.frame(log(ir)) names(lir) <- c("a","b","c","d") I'm trying to understand the meaning of expressions like "~ a+b+c+d", used with princomp, e.g. princomp(~ a+b+c+d, data=lir, cor=T) By inspection, it

hello: I have 3 data.frame objects. First df object: Of dim (149,31). Columns 2:31 are marked as T1..T14 and N1..N16. Name T1 T2 N1 T3 N2 N3 N4 T4 mu1 10 10 9 10 9 9 8 10 mu2 11 11 9 11 9 9 9 11 ... muN 12 12 9 11 9 9 8 12 Second df object: of Dim (50000,31). Columns 2:31 are maked as T1...T14 and N1..N16.

I am just learning to use qplot and can't get the fill/colour to work. Below is the R code for a scatter plot and bar graph. library(ggplot2) x<-c(1,2,3,4,5,6,7) y<-c(1,2,3,2,5,6,3) qplot(x,y, main="Scatter Plot Test", xlab="X Label Test", ylab="Y Label Test", colour="blue")z<-c("van", "van", "van",

here is the input view [code] <form method="post" action="found"> <br> <b>Find by</b><br/> <b>Vehicle Number:</b><br/> <input id="truck_vehicleID" name="truck[vehicleID]" size="20" type="number" value=""/><br/> </p> <%= link_to "Find", :action

Sorry, another newbie question :-( I loaded a data set with 10 rows and 30 columns. The first column is characters for names of car manufacturers: Jeep Nissan Toyota1 Toyota2 Etc. How can I replace "Toyota2" with "Scion"? Thanks again [[alternative HTML version deleted]]

Hey everyone... I''m just getting my feet wet with relational databases using RoR models. The software I''m putting together relies on car parts. Originally I had the database set up as follows create_table :parts do |t| t.column :year, :string t.column :make, :string t.column :model, :string . . . end However, I now realize it''s much better to do it using

Dear All, I have a query : what is the command to count number of repeated words in a column. for ex: a = oranges oranges apples apples grape oranges apple pine the result should be oranges 3 apples 3 grape 1 pine 1 is there an easy way for this. Thanks, Nataraju GM R & D Bangalore -- "No relationship is Static .. You either Step up or Step down" [[alternative HTML

Hi R-helpers, I have the following (dummy) dataframe: > test DATE LOCATION KIND CLASS COUNT 1 1 1 CAR A 2 2 1 1 TRUCK D 3 3 1 1 BUS E 4 4 1 2 CAR E 2 5 1 2 TRUCK A 7 6 1 2 BUS F 1 That I would like to turn into this: > test2 DATE LOCATION KIND CLASS 1 1 1

I have encountered a problem with faceted bar plots. I have tried to create something like the example explained in the ggplot2 book (see pp. 126-128): library(ggplot2) mpg4 <- subset(mpg, manufacturer %in% c("audi", "volkswagen", "jeep")) mpg4$manufacturer <- as.character(mpg4$manufacturer) mpg4$model <- as.character(mpg4$model) base <-

hello: I am very confused when it comes to list operations in R. I seek help in the following problem. I have two different vectors myIDs - a character vector with no names to their elements x2 - another character vector derived from unlisting a list where an element has both a name and value. I am not happy the way x2 is with names and values to every element. > myIDs[1:10] [1]