Displaying 20 results from an estimated 300 matches similar to: "use of modMCMC"
2011 Jul 28
2
Help with modFit of FME package
Dear R users,
I'm trying to fit a set an ODE to an experimental time series. In the attachment you find the R code I wrote using modFit and modCost of FME package and the file of the time series.
When I run summary(Fit) I obtain this error message, and the values of the parameters are equal to the initial guesses I gave to them.
The problem is not due to the fact that I have only one
2011 Aug 05
3
fit a 2-variables function to data
Dearl all,
I have to fit a function
y = f(x1, x2)
to data experiemntal data describing the measured behavior of y.
x1 and x2 are the independent variables.
Could you suggest me wich R package can I use for this purpose?
Thanks,
Paola.
--
*Paola Lecca, PhD*
*The Microsoft Research - University of Trento*
*Centre for Computational and Systems Biology*
*Piazza Manci 17 38123 Povo/Trento,
2011 Aug 05
2
problemsn in using nls
Dear all,
I tried to use nls, but I got the following error
Error in numericDeriv(form[[3L]], names(ind), env) :
Missing value or an infinity produced when evaluating the model
Any suggestion?
Thanks,
Paola.
The code I wrote is
Data_pp2_mrna <- data.frame(
p1 = protein_1,
p6 = protein_6,
pp2_mrna
2011 Aug 01
0
Help with modFit of FME package 2
* Apologies for multiple posting *
I attached to my previous e-mail a .r file, and it was not permitted by the
rules of the mailing lis. Again, please receive my sincere apologies for
this.
I re-send again the e-mail with .txt attachemnt in the hope someone an help
me to solve my problem.
I'm trying to fit a set an ODE to an experimental time series. In the
attachment you find the R code I
2011 Aug 20
0
help with nls fitting
Dear all,
I'm trying to fit the following function
slope_pp3_mrna = ( (k3 * v3_K_d *p1^v3_h) / ( (v3_Kd^v3_h) + p2^v3_h ) ) *
( 1/(1 + (p2/v4_Kd)^v4_h) ) - pp3_mrna
to this experimental data in the datafraeme "Data_pp3_mrna" (see it at the
end of this e-mail)
I'm using the nls function in the following code. IN the last step of the
fit
2013 May 02
0
modMCMC runs in FME package
Dear All,
please help with some thoughts on overcoming the following issues, if possible:
#R Code
require(deSolve)
require(FME)
pars <- list(k = 0.06,v=18)
intimes <- c(0,0.5,12,12.5,50)
input <- c(800,0,800,0,0)
forc <- approxfun(intimes, input, method="constant")
model <- function(pars, times=seq(0, 50, by = 1)) {
derivs <- function(t, state, pars) {
2004 May 30
1
What's wrong with this simple code???
Hi, all
I can not figure this out, please have a look and help me out.
thank you!
Note: this is in SPLUS, not R.
I have following code
***********************************
modfit<-function(yir,yew, ft) {
n<-length(yew)
yew<-yew[1:(n-1)]
yy<-yir-ft
xx<-yew-ft
n<-length(xx)
xx0<-xx[2:n]
yy0 <-yy [2:n]
xx1<-xx[1:(n-1)]
fit <- garch(yy0~xx0 + xx1+var.in.mean,
2004 Sep 16
2
Home Directory Winbind
Greetings,
Trying to find a solution to creating home directories by using winbind. Have this setup:
/etc/pam.d/system-auth:
session required /lib/security/pam_mkhomedir.so skel=/etc/skel/ umask=0077
With smb.conf:
# Global parameters
[global]
workgroup = domain
server string = Monarch Server
security = DOMAIN
map to guest = Bad User
obey pam
2006 Jan 14
2
initialize expression in 'quasi' (PR#8486)
This is not so much a bug as an infelicity in the code that can easily
be fixed.
The initialize expression in the quasi family function is, (uniformly
for all links and all variance functions):
initialize <- expression({
n <- rep.int(1, nobs)
mustart <- y + 0.1 * (y == 0)
})
This is inappropriate (and often fails) for variance function
"mu(1-mu)".
2011 Dec 08
0
Fit initial time with modFit and modCost
Hello,
I would like to use modFit and modCost from the package FME to find
the optimal initial time t0 of a process. For simplicity, the process
is either "off" (value 0) or "on" (value h). So I have a data vector
with some zeros followed by some h's, e.g.
> c(0,0,0,2,2,2,2,2,2,2)
[1] 0 0 0 2 2 2 2 2 2 2
(hence h=2 here). I want to find the best guess for the initial
2024 Dec 06
1
Recently joined RODC looses machine accounts
On Fri, 6 Dec 2024 12:29:03 +0100
Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> Il 06/12/24 10:45, Rowland Penny via samba ha scritto:
> > On Fri, 6 Dec 2024 10:19:31 +0100
> > Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> >
> >> But the machine accoounts are not completely lost, they seem lost
> >> if i query the Read
2011 Jun 03
0
Package dlm generates unstable results?
Hi, All,
This is the first time I seriously use this package. However, I am confused that the result is quite unstable. Maybe I wrote something wrong in the code? So could anybody give me some hint? Many thanks.
My test model is really simple.
Y_t = X_t * a_t + noise(V),(no Intercept here)
a_t = a_{t-1} + noise(W)
I first run the following code: (I shall provide data at the end of the
2011 Jun 03
0
How to reconcile Kalman filter result (by package dlm) with linear regression?
Hello All,
I am working with dlm for the purpose of estimating and forecasting with a Kalman filter model. I have succesfully set up the model and started generating results. Of course, I need to somehow be sure that the results make sense. Without any apparent target to compare with, my natural selection is the results by odinary least square. The idea being that if I choose a diffuse prior,
2024 Dec 03
1
Recently joined RODC looses machine accounts
Il 03/12/24 10:13, Rowland Penny via samba ha scritto:
> On Tue, 3 Dec 2024 09:15:36 +0100
> Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
>
>> Hi, i have some problems with a recently joined Read Only Domain
>> controller.
>>
>> I had 2 Domain Controllers based on Windows Server 2019 (hosts
>> vmw2srvdc1 an vmw2srvdc2). I and i recently
2024 Dec 03
1
Recently joined RODC looses machine accounts
On Tue, 3 Dec 2024 09:15:36 +0100
Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> Hi, i have some problems with a recently joined Read Only Domain
> controller.
>
> I had 2 Domain Controllers based on Windows Server 2019 (hosts
> vmw2srvdc1 an vmw2srvdc2). I and i recently added a new site (PSN)
> and Read Only DC in this second site based on samba (host
2000 Sep 06
3
Symbol size in plots
Dear R-listers,
what is the best way to draw an XY scatterplot with symbol size
proportional to the value taken on by a third variable?
Thank you very much for any help,
Maurizio Pisati
2024 Dec 03
1
Recently joined RODC looses machine accounts
On Tue, 3 Dec 2024 11:25:35 +0100
Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> Il 03/12/24 10:13, Rowland Penny via samba ha scritto:
> > On Tue, 3 Dec 2024 09:15:36 +0100
> > Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> >
> >> Hi, i have some problems with a recently joined Read Only Domain
> >> controller.
>
2007 Mar 28
4
snmp ups Status: Not supported
Hi
I set up my ups with driver snmp-ups, and it get recognized as a AEC T2003.
In the nut-cgi upstats page input/output/load are displayed corectly, but the
Status field is marked as "Not supported".
Is "Status" important to initiate shutdown in case of low battery ? Will my
server shut down correctly ?
thanks
Massimo
I include "upsc snmp@localhost" output:
2024 Dec 06
1
Recently joined RODC looses machine accounts
On Fri, 6 Dec 2024 10:19:31 +0100
Mitja Tav?ar via samba <samba at lists.samba.org> wrote:
> >
> > When you say '30 servers' is this 30 servers plus clients, or 30
> > servers including clients ? if the former, then I suggest you
> > upgrade to an RWDC.
>
> Only the servers some of them are application servers therefore they
> will become clients
2016 Apr 20
1
Problem in long timeouts file access
I have a very strange problem accessing some files on a samba share that
are in use from many windows7 client machines. I'm experiencing long
timeouts: 5-30 seconds per file on very small xml files.
The share is accessed by contemporary Windows7 machines at the time they
are shut down.
It seems to me that some of the files remain opened and locked to all
other clients at server side while the