Displaying 20 results from an estimated 4000 matches similar to: "\examples{} in Rd file"
2011 Jan 17
2
How to still processing despite bug errors?
Hi, everybody.
I am working processing EEG data from 1000 pacients. I have a specific
syntax to perform the Spectral Analysis and a loop to analyse all subjects.
each subject data are in separate folders (P1, P2 P3...)
My question is: in some cases, some errors can appear in one subject. I want
to know if is possible to jump to the next subject and perform the same
syntax , exibiting an error
2006 Jan 23
1
mutlivariate normal and t distributions
Dear R-help list members,
I have created a package 'mnormt' with facilities for the multivariate
normal and t distributions. The core part is simply an interface to
Fortran routines by Alan Genz for computing the integral of two
densities over rectangular regions, using an adaptive integration
method. Other R functions compute densities and generate random
numbers.
The starting
2001 Nov 22
2
optim ???
Hola!
santes<-c(210,169,187,160,167,176,185,206,173,146,174,201,198,148,154)
sdespues<-c(201,165,166,157,147,145,168,180,147,136,151,168,179,129,131)
dantes<-c(130,122,124,104,112,101,121,124,115,102,98,119,106,107,100)
ddespues<-c(125,121,121,106,101,85,98,105,103,98,90,98,110,103,82)
presion<-data.frame( santes, sdespues, dantes, ddespues)
logvero <-
2013 Aug 27
1
Error in simulation. NAN
Hi all,
im triyng to implement a bayesian model with R and c++.
I have a strange problem. I can't reproduce the error with a small
script and then i post the original one.
The problem is after the line
for(MCMC_iter2=0;MCMC_iter2<thin;MCMC_iter2++)
For the first 34 iterations all work fine, after, all the simulations
of mu_acc_P return an "nan". If i delete the line
2006 Oct 13
3
Rmpi performance
Dear R users,
we are trying to do some parallel computing using library(snow).
In particular we have a cluster with 3 nodes
>cl <- makeCluster(3, type = "MPI")
3 slaves are spawned successfully. 0 failed.
and we want to compute the function op_mat (see below) first with the
master and then with the cluster using system.time for checking the
computational performance.
2008 Dec 11
2
how to get the CDF of a density() estimation?
Hi,
I've estimated a simple kernel density of a univariate variable with
density(), but after I would like to find out the CDF at specific
values.
How can I do it?
thanks for your help, with it I am very close to finish my first
little bit more serious work in R,
Viktor
2003 Apr 24
5
Fast R implementation of Gini mean difference
I have written the following function to calculate the weighted mean
difference for univariate data (see
http://www.xycoon.com/gini_mean_difference.htm for a related
formula). Unsurprisingly, the function is slow (compared to sd or mad)
for long vectors. I wonder if there's a way to make the function
faster, short of creating an external C function. Thanks very much
for your advice.
gmd
2003 Jun 21
1
optim with contraints
There seems to exist peculiar cases where optim does not take care
of constraints on the parameters to be optimized over. The call to
optim is of the form
opt <- optim(cp, fn=sn.dev, gr=sn.dev.gh, method="L-BFGS-B",
lower=c(-Inf, 1e-10, -0.99527),
upper=c( Inf, Inf, 0.99527),
control=control, X=X, y=y, hessian=FALSE)
The code has worked fine
2003 May 20
4
Output to connections
In the document "R Data Import/Export", section "Output to connections",
there is the following portion of code:
## convert decimal point to comma in output, using a pipe (Unix)
zz <- pipe(paste("sed s/\\./,/ >", "outfile"), "w")
cat(format(round(rnorm(100), 4)), sep = "\n", file = zz)
close(zz)
## now look at the output
2010 Dec 06
1
waldtest and nested models - poolability (parameter stability)
Dear All,
I'm trying to use waldtest to test poolability (parameter stability) between
two logistic regressions. Because I need to use robust standard errors
(using sandwich), I cannot use anova. anova has no problems running the
test, but waldtest does, indipendently of specifying vcov or not. waldtest
does not appear to see that my models are nested. H0 in my case is the the
vector of
2002 Mar 05
1
Matrix identification bug (PR#1361)
Full_Name: Hao Yu
Version: 1.4.1
OS: Windws and Linux
Submission from: (NULL) (129.100.45.161)
Hi,
Recently we did some benchmarks regarding matrix inverse operation and found
some strange things. See the following results (the package Matrix is most
updated).
1. load the function Toeplitz and library(Matrix)
"Toeplitz"
function(x)
{
matrix(x[1 + abs(outer(seq(along = x),
2006 Jul 17
1
sem: negative parameter variances
Dear Spencer and Prof. Fox,
Thank you for your replies. I'll very appreciate, if you have any ideas concerning the problem described below.
First, I'd like to describe the model in brief.
In general I consider a model with three equations.
First one is for annual GRP growth - in general it looks like:
1) GRP growth per capita = G(investment, migration, initial GRP per
2005 Mar 24
3
Caching computation in rails?
Caching computation in rails?
Simple example: factorial modulus a large number
input: integer x
output: factorial( x ) % 12345678901234567
I want it so that if it computes factorial of N once, it will not have
to compute for N again.
code:
class SiteController < ApplicationController
caches_action :factorial, :inv
def examine
@inv = @params[''inv'']
@outv =
2001 Mar 14
0
segmentation fault of unknown cause (PR#877)
Dear all,
Paulo Ribeiro, p.ribeiro@lancaster.ac.uk, and myself noticed
that R sometimes breaks down with a segmentation fault of
(at least for us) unknown course. (We've read #411 and #671
in the bug report on "optim" -- the problem described
there sounds familiar; but we have not found any hint on a
segmentation fault.)
Please find at the very end of this email the file
2011 Jul 09
2
Meta-analysis with zero values for mean and sd. Continuous data.
Hi,
I want to do a meta-analysis with count data for treatement/control cases.
Mi problem is that I need to use zero values (an informative zero value) for
the mean and standard deviation for one of the treatement, but R has a
problem: "Studies with zero values for sd.e or sd.c get no weight in
meta-analysis". I can agroup the case by Family (byvar=Family).
¿Can you help me? Thanks!
2012 Aug 07
2
Error using ddply inside user-defined function
Hi All,
I *think* it's ddply because the function recognizes vr1, etc, in other
parts of the function.
Here's some code:
# create dataset
PROV.PM.FBCTS <- c(0.00 ,0.00, 33205.19, 25994.56, 23351.37, 26959.56
,27632.58, 26076.24, 0.00, 0.00 , 6741.42, 18665.09 ,18129.59 ,21468.39
,21294.60 ,22764.82, 26076.73)
FBCTS.INV.TOT <- c(0 , 0, 958612, 487990, 413344, 573347,
2010 Jan 31
3
combining data frames in a list - how do I add breaks?
I'm a week-old R user, and have become stuck trying to create usable CSV
outputs for post-processing. I am using the package Rioja, which provides
small datasets of results. I am running several analyses in a loop and
iteratively adding the results to a *list* ("combined"). Within each
iteration I use the following:
> combined[[i]] <- performance(fit)
With two iterations I
2003 May 13
2
RMySQL crashes R
I have justed upgraded R v1.7.0 on Windows NT 4 and have installed the
latest RMySQL (version 0.5-1)and DBI (version 0.1-5) packages.
When I issue the following commands (tactfully adjusted) R just crashes and
disappears, any ideas?
require(RMySQL)
m <- dbDriver("MySQL")
con <- dbConnect(m, dbname="xxx", user="xxx", password="xxx",
2006 Feb 13
2
bivariate normal distribution
Hi, there.
Does anyone know the R function for calculating the cdf of bivariate
normal distribution function?
Thanks.
Yulei
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2017 Nov 17
2
HTML documentation is not in the expected location
Since I have updated my Linux system, and consequently re-installed R, I
am unable to see HTML documentation which I used to access via a web
browser. To be more specific, my R installation is declared to be here:
> R RHOME
/usr/local/lib/R
However, if I look at a location such as
/usr/local/lib/R/library/base/html
this contains only two entries
File: 00Index.html
File: R.css