similar to: how to change strip text of effect plot

I have a process where I am creating a effects plot similar to the cowles effect example. I would like to add the point estimates to the effects plot, can someone show me the correct syntax. I have included the "R" effects example, so you can show me the correct syntax. Thanks mod.cowles <- glm(volunteer ~ sex + neuroticism*extraversion, data=Cowles, family=binomial)

Hello, I am not having success in a simple task. Using the effects package, I would like to add reference lines at probability values of 0.1 – 0.6 on a plot of the effects. The plot command works, but following up with an abline command produces the message “plot .new has not been called yet”, and of course the reference lines were not added. Looking through past R help lists, there was a

I'm very new to R and modeling but need some help with visualization of glms. I'd like to make a graph of my glms to visualize the different effects of different parameters. I've got a binary response variable (bird sightings) and use binomial glms. The 'main' response variable is a measure of distance to a track and the parameters I'm testing for are vegetation parameters

Dear everybody! Need help with graphics. I am runnig a simple lm and then using allEffects from 'effects' package: require(effects) model<-lm(Y~A+B, data=mydataframe) I am trying to build (for each predictor - A and then B) a plot of means on Y. I was successful doing it like this - in one swoop: ml.eff<-allEffects(ml1, se=F) plot(ml.eff,ylab="Title of Y") Is it

Dear R users, I have some trouble using the allEffects() function to compute and display effect plots for a linear model. My data is quite simple, it concerns effects of 3 treatments on the tumoral volume of mice. vTum codes for the qualitative initial volume, from small to big, temps is the time in month since beginning of treatment, and S?rie codes for the batch. Data is unbalanced. >

Hello, I'm new to R and have been following many guides including the two-way anova (http://www.personality-project.org/r/r.anova.html). Using that walkthrough including the supplied data I do str(data.ex2) and receive the appropriate types of data as follows: > str(data.ex2) 'data.frame': 16 obs. of 4 variables: $ Observation: int 1 2 3 4 5 6 7 8 9 10 ... $ Gender :

Dear R People: I'm using R2HTML but having a strange result. Here is the original data: resp trt block 90.3 A I 89.2 A II 98.2 A III 93.9 A IV 87.4 A V 97.9 A VI 92.5 B I 89.5 B II 90.6 B III 94.7 B IV 87.0 B V 95.8 B VI 85.5 C I 90.8 C II 89.6 C III 86.2 C IV 88.0 C V 93.4 C VI 82.5 D I 89.5 D II 85.6 D III 87.4 D IV 78.9 D V 90.7 D VI And here are the commands: > resin1.df <-

Thanks in advance for any help. I am attempting to add points to a plot using the allEffects command in the effects package. When I try to add the points I get the following error message: Error in plot.xy(xy.coords(x, y), type = type, ...) : plot.new has not been called yet Strangely, using the code I've pasted below this has worked for me in the past however figuring out what has

Problem on flexmix when trying to apply signature developed in one model to a new sample. Dear R Users, R Core Team, I have a problem when trying to know the classification of the tested cases using two variables with the function of flexmix: After importing the database and creating a matrix: BM<-cbind(Data$var1,Data$var2) I see that the best model has 2 groups and use: ex2

Hi, I'm running R 2.11.1 on Windows 32-bit. I fitted a glm to a "large" data set with no problems (i.e., nothing is wrong with the created glm object). However, when I try to use the "effects" package to plot the effects I get the error message shown below. I get the same message if I try to plot a single effect. Any idea what could be wrong here? glm.eff <-

When investigating the legend(x,y, expression ( <math>, <math> ), ....) [as suggested by Jim Lindsey], I once again stumbled over the fact that expression objects behave somewhat ``wierdly'', IMHO. We can have expressions of length(.) > 1, and access elements of these like list elements. However, other natural things don't work with expressions; some example

Hi there, I checked google for aov. usually one uses summary to see whether the p-value is small. but I want to put aov in my script. how can I get the p-value, (0.1115, 0.6665, 0.6665 in the following example)? thanks YU > datafilename="http://personality-project.org/r/datasets/R.appendix2.data" > data.example2=read.table(datafilename,header=T) > aov.ex2 =

I've got two tables.... first one(table1): ID chrom start end Ex1 2 152 180 Ex2 10 2000 2220 Ex3 15 3000 4000 second one ( table2): chrom location name 2 160 Alv 2 190 GNN 2 100

Hi everyone, I am beginner using R but I try to learn more. I need this graphic or similar but instead of tropical and temperate are three ontogenetic states Larva Met Juv CTMAX CTMIN SP SP SP This is my scrip: Ex = subset(Expr, Outlayer=="N") Ex2 = subset (Ex, S0 == 1) Ex3

Full_Name: Karsten Krug Version: 2.4.0 OS: Open Suse 10.0, Windows XP Submission from: (NULL) (88.134.13.50) I found a problem in the 'optimise' function for one dimensional optimisation. Example 1: Try to find a maximum of the function below with the use of 'optimise' in the interval [0,0.5]. The function follows a parabola and has two local maxima located at the margins of

I had an error message while running a macro from Yudi Pawitan's web site: > source("ex2-13.r") Error in parse(file, n, text, prompt) : syntax error on line 2 Inspecting ex2-13.r I found that the error was generated by another source() command. Clearly R does not like nested source()s, which is fair enough when you think about it. Still it's something that you might want

Using R2.12.1 on Ubuntu 10.04.1 I've tried to run the following code chunk in odfWeave <<fig1, echo=TRUE,fig=TRUE,width=7,height=4>>= x<-seq(1:100)/10 y<-sin(cos(x/pi)) imageDefs <- getImageDefs() imageDefs$dispWidth <- 4.5 imageDefs$dispHeight<- 4.5 setImageDefs(imageDefs) X11(type="cairo") plot(x,y) title(main="sin(cos(x/pi))")

lo there all, i want to have a date_select heper default to the year 2006, but cant seem to find out how to pull it off. any takers ? -- Posted via http://www.ruby-forum.com/. --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "Ruby on Rails: Talk" group. To post to this group, send email to

Dear R-community, Using bwplot, how can I put the whiskers at percentile 5 and percentile 95, in place of the default position coef=1.5?? Using panel=panel.bwstrip, whiskerpos=0.05, from the package agsemisc gives satisfaction, but changes the appearance of my boxplot and works with an old version of R, what I don’t want, and I didn’t find the option in box.umbrella parameters Many thanks

I have installed Samba 3.0.11 on OpenBSD 3.6. It is linked with MIT Kerberos 1.4, which was installed to /usr/local/kerberos. Whenever i run a Samba application (any of them; i get these messages when starting any of the smbd, nmbd, or winbindd daemons, as well as user applications such as smbclient) i get a screen full of errors. Everything so far seems to be working, but the errors are a