Displaying 20 results from an estimated 6000 matches similar to: "write.table equivalent for lists?"
2009 Oct 07
2
Second y-axis --- alternative to par(new=
Hi
is there an alternative to par(new), for ading data to a plot for a
different y-axis?
My problem with par(new=TRUE) is, that it re-defines all axis and labels (as
in example 1) and one has to use xlim=... to fix the x-axis.
I am looking for something, which simply resets the y-axis, so that a new
plot() (or points()/lines()) keeps the x-axis, but re-defines the y-axis.
Is there something
2009 Oct 30
2
Ubuntu packages compiled with 2.9
Hi
I upgraded to R 2.10.0, and I encounter a problem with some packages on R,
installed via apt-get..
They are still compiled by 2.9 and give me an warning when I load the
packages. Will these packages be recompiled with R 2.10, or should I rather
switch to self-compiling?
Cheers,
Rainer
--
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology,
UCT), Dipl. Phys.
2009 Dec 11
1
Creating bibtex file of all installed packages?
Hi
is there an easy and fast way, to generate a BibTeX file of all installed /
loaded packages and R?
I know about toBibtex(citation()) to extract the BibTeX for a single
package, but how can I generate a file containg citations for all installed
/ loaded packages?
Cheers,
Rainer
--
NEW GERMAN FAX NUMBER!!!
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology,
UCT),
2011 Feb 01
2
How to change size of xlab inplot?
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Hi
I want to increase the size of the text for xlab in the plot command:
plot(1,1, xlab="Label")
I tried cex, cex.caption and others, but none worked. Is there a way of
using cex=2 for the xlab?
Thanks,
Rainer
- --
Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)
Centre of
2011 Mar 11
2
How to get all combinations between two character vectors?
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Hi
I know there is a function - I have used it before - but I always forget
what it is called...
I need the combination of two character vectors, i.e:
x <- c("a", "b")
y <- c("x", "y")
z <- THEFUNCTION(x, y)
z == c("ax", "ay", "bx", "by")
I promise I will
2010 Jul 29
2
Replace last element in a vector - elegant solution?
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Hi
I have to replace the last element of a vector with 0, but the length of
x is not known at coding time. So I do the following:
x <- 1:10
x
x[length(x)] <- 0
x
it is working nicely, but I am wondering: is there a more elegant
solution( like tail(x, 1) <- 0 , which does not work)?
Thanks,
Rainer
- --
Rainer M. Krug, PhD (Conservation
2011 Mar 10
2
Not sure how to handle hazard in my survival model
Hi R experts :)
I'm trying to carry out a survival model on my data, but I am unsure of
whether it's appropriate or if I should do something specific in regards to
hazard.
My data is time to death by predator where I have 8 prey and one predator in
the setting. This means that two prey can't possibly die at the same time
and I can't quite get my head around how to include this in
2009 Oct 08
2
intersection of 2 density curves
Hi,
I would like to find out the coordinates of the intersection points of 2 density curves. I did a search but i didn't get any significant results. I really hope some of you have some ideas. here it is an example:
set.seed(123)
x1 <- rnorm(100, 1, 1)
x2 <- rnorm(100, 0, 1)
d1 <- density(x1)
d2 <- density(x2)
plot(d1, col = 2)
lines(d2, col = 4)
Now i would like to know
2011 Jan 13
1
Unexpected behaviour of write.csv - read.csv
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Hi
Assuming the following:
> x <- data.frame(a=1:10, b=runif(10))
> str(x)
'data.frame': 10 obs. of 2 variables:
$ a: int 1 2 3 4 5 6 7 8 9 10
$ b: num 0.692 0.325 0.634 0.16 0.873 ...
> write.csv(x, "x.csv")
> x2 <- read.csv("x.csv")
> str(x2)
'data.frame': 10 obs. of 3 variables:
$ X:
2010 Nov 12
1
Optimizing compilation of R
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Hi
I know this has been asked before, but I can not find it - so my apologies.
I want to compile R myself, to optimize it for speed. There is a small
section (a few lines actually) in the R-admin manual (Compilation-flags)
which states that the LDFLAGS "on recent systems
?'-Bdirect,--hash-style=both,-Wl,-O1'? is recommended".
But
2010 Dec 08
1
RGL crashes
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Hi
rgl crashes my R session, when resizing the rgl graphic window.
I am using Ubuntu Maversick, with dual monitor setup. If I disconnect
one monitor, I can resize it "a little bit", but it still craches if I
enlarge it to much.
I assume that the problem has to do with allocated graphic memory in the
kernel, but why is R crashing
2010 Dec 08
1
RGL crashes
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Hi
rgl crashes my R session, when resizing the rgl graphic window.
I am using Ubuntu Maversick, with dual monitor setup. If I disconnect
one monitor, I can resize it "a little bit", but it still craches if I
enlarge it to much.
I assume that the problem has to do with allocated graphic memory in the
kernel, but why is R crashing
2012 Aug 22
3
Question concerning anova()
Hi
I am comparing four different linear mixed effect models, derived from updating the original one. To
compare these, I want to use anova(). I therefore do the following (not reproducible - just to
illustration purpose!):
dat <- loadSPECIES(SPECIES)
subs <- expression(dead==FALSE & recTreat==FALSE)
feff <- noBefore~pHarv*year # fixed effect in the model
reff <-
2011 Jul 26
1
Comparing two pdf resulting from density() and identify where significantly smaller or larger?
Hi
this might be a little bit off topic, but here it goes: lets assume I have
the following:
set.seed(13)
dat1 <- rnorm(2000, mean=10, sd=10)
dat2 <- rnorm(100, mean=10, sd=20)
d.all <- density(dat, n=1024)
d.co <- density(x[[v]], , from=min(d.all$x), to=max(d.all$x),
n=1024)
d.diff <- list(
x = d.all$x,
2010 Sep 25
2
OT: What distribution is this?
Hi
This is OT, but I need it for my simulation in R.
I have a special case for sampling with replacement: instead of sampling
once and replacing it immediately, I sample n times, and then replace all n
items.
So:
N entities
x samples with replacement
each sample consists of n sub-samples WITHOUT replacement, which are all
replaced before the next sample is drawn
My question is: which
2010 Jan 21
1
superimpose histogram and fitted gamma pdf
Hi r-users,
I try to draw histogram (in terms of probabilty) and superimpose with the gamma pdf. Using this code below I can get the plots BUT the y scale for the density is out of scale. How do I change the y-axis scale to max 1? Another thing, how I do draw smooth line rather that points?
Nota that my observed data is hume_pos and the fitted data is rgam1.
hist(hume_pos,prob=TRUE)
2011 Feb 24
2
debugging
Dear R user
How to make the program stop at the spot where the error occurs? I mean
inside the iterations,.
Many thanks
yan
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2012 Aug 21
2
define subset argument for function lm as variable?
Hi
I want to do a series of linear models, and would like to define the input arguments for lm() as
variables. I managed easily to define the formula arguments in a variable, but I also would like to
have the "subset" in a variable. My reasoning is, that I have the subset in the results object.
So I wiould like to add a line like:
subs <- dead==FALSE & recTreat==FALSE
which
2011 Oct 05
2
"unload" a library while testing?
Hi
I am testing a package, and after I make changes, I have to close R and open
R again to load the new version (same version number) of the package I am
working on. So my question:
is there a function which removes a package, i.e
library(myPackage)
> Package is loaded
unlibrary(myPackage)
> package is not loaded any more
Thanks,
Rainer
--
Rainer M. Krug, PhD (Conservation Ecology,
2011 Mar 04
2
Anyone know a forum for stats advice?
Hi,
I know this forum is for R-related issues, but the question I have is a statistical question & I was wondering if anyone could recommend a good statistics forum where I can ask the question? My question is relating to bootstrapping of binary data (ecology data) - I can give more detail, but wasn't sure I could address the question here as it is more statistical based than R based