similar to: Error in M[, 1] : incorrect number of dimensions when trying to plot hexbin

Hi, I have been trying to output my graphs to a file (jpeg, pdf, ps, it doesnt matter) but i cant seem to be able to get it to output. I tried a few things but none of them worked and am lost as what to do now. I am using the scatter3d function, and it prints out the graphs on tot he screen without any problems, but when it comes to writing them to a file i cant make it work. Is there any

Hi all, I am trying to download, decompress and read a csv file. My code: myurl <- "ftp://ftp.ncbi.nih.gov/pub/geo/DATA/supplementary/series/GSE24729/GSE24729_MitoNuclear_suppl_male_stats.csv.gz" # myfile <- "GSE24729_MitoNuclear_suppl_male_stats.csv.gz" # download.file(myurl, destfile=myfile, mode="w") # mycon <- gzcon(gzfile(myfile,

I am trying to obtain the Kruskal (1964) secondary least-squares monotonic transformation of a rank variable given 4 categorical variables in order to obtain optimal transformation for regression. The academic problem assigned is to compare R, SPSS (Conjoint Analysis), and SAS' proc transreg in speed and accuracy. Currently, SAS and SPSS are giving similar results, but R's are quite

[cc'd to package maintainer] This feels like a fairly straightforward question, so I'm surprised not to have found an answer so far (RSiteSearch, package help, vignette ...) It seems fairly hard (without some fairly serious hacking) to hard-code the axis limits in a hexbin plot from the hexbin package. Here's what I've figured out so far: * when you do the hexagonal

Is it possible to convert an hexbin object like hexbin(rep(1:100,each=100),rep(1:100,100),xbins=10) and convert it to a vectorial (shp) format? Paulo ---------------------------------------------------------------------------- ------------------------------------------------- This electronic mail transmission including any attachment hereof, contains information that is private and confidential,

Hi All - I'm having a layout problem with hexbin. The axis labels overlap with the axis tick labels. I've tried changing grid and trellis layout settings, as well as the more obvious mar settings without luck. Here's how to recreate the probem: require(hexbin) x <- abs(rnorm(500,500,500)) y <- jitter(x) bin <- hexbin(x,y,) srt=plot(bin,xlab="Average X Value",

Hello everybody, I hope you can give me some help with limiting the ranges in x, y, and z for a hexbin plot. All I have found on the net is an unanswered message to this list from last year, so I hope my problem is not too stupid. I would like to plot some data using hexagonal binning. Currently, I am doing the following: library(hexbin) data<-scan("input.dat", what =

Hello, I would like some help to plot a vertical line on a scatterplot build with hexbin package. I just need to plot a vertical line on the graph to mark a threshold value on x axis. It would be better if the parameter of the plot line function respect the x axis scale. Thanks, Rodrigo [[alternative HTML version deleted]]

Dear All i am trying to figure out the use of hexbin function in the hexbin package --can any one send me a working example of the same The > example(hexbin) ---option is of not much use Thanks Kind regards Ravi [[alternative HTML version deleted]]

Greetings: I have multiple hexbin plots with varying greatest densities. Right now, the data on each plot varies from 1-256 levels of density. The problem with that is that in Plot A the data are more scattered across a 2 x 2 grid whereas in Plot B the data are more concentrated in fewer cells. Hence, Plot A has a few very dense grid cells and plot B has nothing as dense as plot A. (In Plot A

I have lots of data that I need to display, and I think hexbin would be good for it. However, I cannot load one of the requried packages associated with the hexbin package: > library(hexbin) Loading required package: colorspace Error in loadNamespace(package, c(which.lib.loc, lib.loc), keep.source = keep.source) : in 'colorspace' methods for export not found: [, coords, plot

Hi, Would like to use to the hexbin package to plot a 2D hist - because it looks really _cool_. My problem is related to drawing a pdf hexbin graphic in series of other graphics. All other figures have a par(mar=c(3.2,3.2,1,1)). So the gplot.hexbin figure in this series looks a little alienated? Was trying a to specify the _mar_ using par, viewport, hexViewport etc. a little. My question. How

Hi, I am trying to create a plot with pairs() using a gplot.hexbin() for each pair. For pairs I can provide a custom upperPanel function: pairs(iris[1:4], panel=mypanel) and mypanel() calls plot.hexbin(): library(hexbin) # Bioconductor mypanel <- function(x, ...){ hb <- hexbin(x) plot(hb) } The problem is that gplot.hexbin() is based on the

Hi all! I'm trying to save an output of the HEXBIN process... is so much data (105k), and I need to export to an ASCII file. I tried to use: write.table() ----> Error in as.data.frame.default(x[[i]], optional = TRUE) : cannot coerce class 'structure("hexbin", package = "hexbin")' into a data.frame cat() ---> Error in cat(list(...), file, sep, fill,

I can save to png, TIFF and jpg but get an error "Error: invalid graphics state" when trying to save as pdf and I have to restart R. This happens when I add mtext lines. There are a few other questions e.g. I want to move the mtext on side 1 to the left, but that is the main issue for now. I'm not using the ylab inside gplot.hexbin because it writes over the numbers on the axis.

Dear all, I am trying to use hexbin and read the very interesting article on grid ( http://www.ci.tuwien.ac.at/Conferences/useR-2004/Keynotes/Murrell.pdf ) and am hoping for some advice from more experienced users of hexbin. I am trying to visualise a data and fit a straight line trough it. For example, here is how I would do it in the usual way # simulate data x <- rnorm(1000) y <-

Dear maintainers and R-devel, Several orphaned CRAN packages are about to be archived due to outstanding QC problems, but have CRAN and BioC packages depending on them which would be broken by the archival (and hence need archiving alongside). Therefore we are looking for new maintainers taking over maintainership for one or more of the following packages: R2HTML SemiPar cghseg hexbin lgtdl

Hi all- So sorry to bother you all with something pretty basic. I am trying to add the lines method output from svysmooth to a svyplot with style="grayhex". However, the line either appears in the wrong place or if I am running in R Studio it causes the system to crash. I know this is something to do with Lattice graphics, but for the life of me I can not figure out how. Dr. Lumley

On Fri, Feb 21, 2014 at 7:31 PM, Brad King <brad.king at kitware.com> wrote: > On 02/21/2014 09:49 AM, Alexey Samsonov wrote: > > 1) Looks like "DEPENDS" option is just broken > > I use cmake 2.8.10.2. > > Dependencies on normal targets were accidentally broken in 2.8.9 and > later fixed in 2.8.11 (along with a test case to keep it working): > >

Hi, I have a problem, delivery called from /etc/aliases file by pipe delivers with mode 0600. I need system users with shared mail folders (Maildir format). When I changed alias to pipe to shell wrapper with mode 002 set in it, nothing changed. MTA is sendmail, OS Solaris, and dovecot version 1.1.1. Can somebody help? Here are dovecot settings: --- /opt/dovecot11/sbin/dovecot -n # 1.1.1: