similar to: Sweave and graphs

Hi all, I know from googling that this is a common problem; I've just tried what I understand to be the common solutions to know avail -- maybe I'm just confused. I installed Miktex 2.8 -- it seems to be working fine. I'm using this demo document: http://www.stat.berkeley.edu/~houston/demo.Rnw I've copied the Sweave.sty file into at this point multiple places on the Miktex

I am trying to learn the basics of Sweave so I read some things and a friend gave me his Rnw file to play with. I am able to do R CMD Sweave mark-example.Rnw. That works. But, then when I do latex mark-example.tex, I get the message below. I looked in the archives and Martin Morgan mentioned something in 2004 in terms of making sure that latex is looking at where Sweave.sty is but I am unsure

Dear All: For a few days now I have struggled with recreating a stable LaTeX/R/Sweave environment on a new Windows XP SP3 machine. Unfortunately it seems that I ran out of good ideas and I would like your expert opinion on how I should approach this task and be successful. In essence, I installed (several times) in this order the following: R2.10.1 (and then R 2.9.2), Adobe Acrobat Reader 9

Dear guRus, I would like to loop over a medium amount of Sweave code, including both R and LaTeX chunks. Is there any way to do so? As an illustration, can I create a .tex file like this using a loop within a .Rnw file, where the "1,2,3" comes from some iteration variable in R? ################################################ \documentclass{article} \usepackage{Sweave} \begin{document}

Hi List, I have a problem with using Latex and Sweave for creating a document. So I downloaded the Sweave manual from http://www.statistik.lmu.de/~leisch/Sweave/Sweave-manual.pdf and i have tried to replicate the example on pages 4-5, but i encounter the following problem: IT DOES NOT WORK. I can run Sweave, create the .tex file and then when building the .tex file in TeXnikCenter i get all

In the process of updating R to R 2.7 alpha or R 2.7 beta for the BioConductor 2.2 builds on Windows, I have hit a snag because the BioC build system has long path names (e.g. D:\biocbld\bbs-2.2-bioc\R) and these path names are not resolving properly by MiKTeX 2.7 during vignette construction. Take, for example, the attached vignette from Biobase, Bioconductor.Rnw. I have built R from source

Hello, I have the following makefile. The problem is that the bibliography doesn t work. Any help would be appreciated! I really don t don t what to do..:-( # The sources of the report (tex, Rnw and other files (e.g. bib, idx)) TEX_CMPS = Report problem RNW_CMPS = prop1 prop2 ExeExps OTHER = Report.bib # The name of the report to produce all: Report.pdf code: $(RNW_CMPS:=.R) clean: rm

Hi R-devels, I encounter the following problem when I want to build a vignette in the package building process under Windows platform i386-pc-mingw32 arch i386 os mingw32 system i386, mingw32 status major 2 minor

Dear R-users I am trying to understand how Sweave works by running some simple examples. In the example I am working with there is a chunk where the R-commands related to plotting a figure are placed. When running R CMD Sweave ? , pdflatex the output is a portrait figure. I wonder whether it would be possible to change the orientation to landscape (not in the latex file but in Rnw file). Many

An Sweave file, 'test.Rnw': \documentclass{article} \title{Sweave minimal} \author{MK} \begin{document} \maketitle We try Sweave: <<1>>= data(airquality) summary(airquality) x <- airquality[1, 1] @ I try Sexpr: \Sexpr{x} We plot: \begin{center} <<2, fig=TRUE, echo=FALSE >>= boxplot(Ozone ~ Month, data = airquality) @ \end{center} \end{document} I check the

I think I've gotten my Emacs/Sweave/R system set up correctly, thanks to Vincent and Jim, but I haven't been successful getting my first document produced. I'm trying to use one of Friedrich Leisch's examples, http://www.ci.tuwien.ac.at/~leisch/Sweave/example-1.Snw. I cut and pasted the text into a document sweaveexample.Rnw in Emacs. It seemed to be processed successfully with R:

Hi.. I am running R version 2.3.1 on a Windows XP machine with the latest Miktex 2.5 installed. I get no errors from R when running the Sweave example, testfile <- system.file("Sweave", "Sweave-test-1.Rnw", package = "utils") However, when I tex the resulting .tex file (after installing a4.sty) I get the error below. This is pdfeTeX, Version

the problem is a little hard to explain; the .Rnw files (below) probably do a better job, but here goes ... Sweave doesn't like it when i size a graphical device in a code chunk using either, e.g.: windows(width=20, height=5) in Windows, or, e.g. x11(width=20, height=5) under X, when i then plot something in said device and try to include this graphical output in the resulting

I'm trying to learn Sweave. So far things are going well with the chunks of code identified by << >>= But I'm having trouble with the in-line text use of \Sexpr. Here is a short example .Rnw file: \documentclass[12pt]{article} \usepackage[margin=1.25in]{geometry} \usepackage{graphicx} \usepackage{Sweave} \begin{document} <<test>>= pnorm(1) @ \Sexpr{2+6}

Hi, I would appreciate some help with a very basic problem in using pgfSweave. That is, dealing with the sweave.sty file. After some googling, I did the following : (1) copied the sweave.sty file to my trial folder and (2) added the line?? \usepackage{Sweave}?? to the Rnw file. Are there more elegant ways of dealing with this issue? I have read something about letting Miktex know about the

Let's say I have written the following tiny .Rnw file: _________________________________________ \documentclass{article} \usepackage[utf8]{inputenc} \usepackage{Sweave} \usepackage{tikz} \usepackage{pgf} \begin{document} <<>>= sessionInfo() @ \end{document} _________________________________________ I then can go to R and use sweave to translate the .Rnw file into a .tex

Hello I think there is a conflict between setwd() and \SweaveOpts{prefix.string=}. In the same document, those both command get Sweave confuse the files and directories. See: say my .Rnw document is in File1 If one inserts some setwd() for another file: -setwd(File2) then the command \SweaveOpts{prefix.string=graphics/Rplots} will search the "graphics" folder in File2 because of

Dear list, I have tried to setup my Xemacs for use with Sweave, which I indend to learn. I have followed the instructions in the Sweave FAQ, that is to say, I put (defun Rnw-mode () (require 'ess-noweb) (noweb-mode) (if (fboundp 'R-mode) (setq noweb-default-code-mode 'R-mode))) (add-to-list 'auto-mode-alist '("\\.Rnw\\'" . Rnw-mode)) (add-to-list

Dear Friends, I not sure whether this is an Sweave or a beamer problem. The Rnw file: \documentclass[compress,smaller]{beamer} %\documentclass{article} %\usepackage{beamerarticle} \usepackage{Sweave} \title{Psychophysics II} \date{September 9, 2008} \begin{document} \frame{ \begin{Schunk} \begin{Sinput} > ro <- 0.2 > c <- seq(from = -3, to = 4, by = 0.1) > fn <- 1 -

Does anybody have a workable system to run an Rnw document through R-Sweave when necessary, but to just run it through LaTeX if no new R calculations are needed? I.e., the figures already exist, I do not need R to do more work for me, so I send the document straight to LaTeX. I want to leave open the option that I might need to run the document through Sweave in the future, so I don't want