similar to: Argument lib is missing

Dear all, I have a set of five datasets with string, for which I need to draw the venn diagram. there are tools available to draw venn diagram online, but limited to three sets. I can also generate venn for three from limma package, but do not know how to proceed with five subsets. Help me in drawing the same any script . Thank you Khush [[alternative HTML version deleted]]

Hi, Can anyone tell me how to set Z-score according to my own requirement as the below code is taking as per the file entries. Any help would be appreciable. library(gplots) x=read.table("final.txt", header=TRUE) mat=data.matrix(x) heatmap.2(mat, col=colorRampPalette(c("green","white","red"))(256), #col=greenred(75), Rowv=TRUE, Colv=FALSE, distfun = dist,

Hi all , I have following script to plot some data. plot( c(1,1100), c(0,15), type='n', xlab='', ylab='', ylim=c(0.1,25) , las=2) axis (1, at = seq(0,1100,50), las =2) axis (2, at = seq(0,25,1), las =2) lines( c(1,304),c(0,0),col='grey', lwd=3 ) lines( c(1,238),c(1,1),col='grey', lwd=3 ) segments(86, 0 ,270,col = "green", pch=23,

Hi, How to mark points on x axis of a graph keeping x axis as constant and changing y from y1 to y2 respectively. I want to highlight the area from y1 to y2. Any suggestions Thank you Jeet [[alternative HTML version deleted]]

The issue shows when installing some packages. I was interested in using "gplots" so i ran: install.packages("gplots", dependencies=TRUE) and the outcome was something like this: Aviso en install.packages("gplots", dependencies = TRUE) : argument 'lib' is missing: using '/home/buscoverdad/R/i686-pc-linux-gnu-library/2.11' ---

Dear All, I am newbie to R, and I wanted to plot a barplots with R and in such a way that It will also show me position which I can plot on the bar line. Here is my code that I am using to plot, > chromosome <- c(40.2, 35.6, 36.1, 29.6, 31, 29.6, 31, 29.4, 28.2, 23, 23, 28.2) >barplot (chromosome, col="purple", xlab="Oryza sativa Chromosomes", border = NA, space =

Hi, I'm new to R. Apologies if this is a simple query, I've searched the mailing lists and docs but can't find a solution to my problem. I'm trying to make some packages available on our intranet. During development the 'intranet' is a webserver running on localhost. * When I call "install.packages" I get a mesage about not being able to access 'index

I had installed de "gplots" package and then I loaded the library but the package did not work. I recieved a message like this: > install.packages("gplots", dependencies = TRUE) Installing package(s) into ‘/home/fpiston/R/x86_64-pc-linux-gnu-library/2.14’ (as ‘lib’ is unspecified) --- Please select a CRAN mirror for use in this session --- Loading Tcl/Tk interface ... done

I noticed that the text() command adds text to a plot. Is there a way to either make the plot blank or add text to a "blank sheet". I would like to "plot" a page that contains just text, no plot lines, labels, etc. Suggestions? Kevin [[alternative HTML version deleted]]

Hello all, I use R on both windows and a "mainframe" linux installation (RedHat enterprise 3.0, which they tell me is soon to be upgraded to 4.0). On windows I installed the package gplots without trouble, and it works fine. When I attempted to do the same on the unix computer, the following error message was forthcoming: downloaded 216Kb * Installing *source* package

Dear R community, I am using R version 2.4.1 GUI 1.18 on an iBook G4 with OS 10.4.10. When I try to load package 'gplots' I get the following message: > library(gplots) Loading required package: gdata Attaching package: 'gdata' The following object(s) are masked _by_ .GlobalEnv : reorder.factor Loading required package: gtools Attaching package: 'gtools'

Hi R help, What is the best way to plots surfaces in 3 dimensions? I also have the following availability problem with "plot3d" and "scatterplot3d", and "wireframe": install.packages("scatterplot3d") Warning: unable to access index for repository http://cran.ch.r-project.org/bin/macosx/leopard/contrib/2.10 Warning message: In getDependencies(pkgs,

Hello List, Could someone tell why I can't install the Himsc and survey packages for R version 2.13.0 (2011-04-13)? What am I doing wrong here? Thanks, Pradip > install.packages ("Hmisc", dependencies=TRUE) --- Please select a CRAN mirror for use in this session --- Warning: unable to access index for repository http://watson.nci.nih.gov/cran_mirror/bin/windows/contrib/2.13

Dear all, I have an issue trying to install new packages (have tried with RODBC_1.3-1, gplots_2.6.1, gtools_2.7.4 packages) and get the same error message : "Error in library(gplots) : there is no package called 'gplots'" Only clue I have found so far on the Web is related to Perl (Perl modules are installed on my computer, but which one is related to gplots if any ?); no

I have a revised version of the gregmisc package, which I've converted into a package bundle each of which has a namespace: gplots, gmodels, gdata, gtoools. Of course, there are interdependencies among these namespaces: gsun374: /tmp [11]> cd gregmisc/ gsun374: gregmisc [12]> grep import */NAMESPACE gdata/NAMESPACE:importFrom(gtools, odd, invalid, mixedsort)

Dear lists: I could not calculate what is wrong with my installing. Could you help me to find the solution? Thanks. Following are the installing screen massages: install.packages("demography") 将程序包安装入‘/home/zzk/R/i686-pc-linux-gnu-library/2.12’ (因为‘lib’没有被指定) --- 在此連線階段时请选用CRAN的鏡子 --- 载入Tcl/Tk接口... 完成 also installing the dependencies ‘akima’, ‘rgl’, ‘misc3d’, ‘quadprog’, ‘zoo’, ‘locfit’,

I am having difficulty installing packages. For example, here I have tried to install "gplots" but to no avail. I have tried multiple mirrors and different packages (errbar) but after installation I seem to be unable to access any of the commands or help pages. I am a little concerned about the 'lib' missing message but this has been present for previous successful package

These packages were not available. Are these the only places to go for backtesting technical trading systems other than ttrTests pls? > install.packages("quantstrat", repos="http://R-Forge.R-project.org") Warning in install.packages("quantstrat", repos = " http://R-Forge.R-project.org") : argument 'lib' is missing: using

Hello Group, I am trying out RQuantLib on a 64bit Win 7 machine. But running into installation errors install.packages("RQuantLib") Warning in install.packages("RQuantLib") : argument 'lib' is missing: using 'C:\Users\Tester\Documents/R/win64-library/2.11' Warning: unable to access index for repository

Hi All, I'd like to see the function code behind the barplots2() function in the gplots package, however i come across a bit of a stumbling block of a hidden function, can anyone help? > library(gplots) > methods(barplot2) [1] barplot2.default* Non-visible functions are asterisked > barplot2 function (height, ...) UseMethod("barplot2") <environment: