similar to: igraph, graph layout and node overlaps

hi I am struck with a problem in igraph package of R. My problem is as follows I want to plot a power law fit for my data (in .net format --- pajek format) syntax for that in R is g <- read.graph("filename.net", "pajek") d <- degree (g, mode="in") power.law.fit (d+1, 2) it gives me desired out put if my if input a single file but I want to use a variable

igraph is a package for graphs and networks. It has a C core and uses a simple and fast graph representation allowing millions of vertices and edges. NEW FEATURES: - We use the ARPACK library for graph related eigenvalue problems, like Page Rank calculation, Kleinberg's hub and authority scores, eigenvector centrality, etc. There is also a generic interface if someone wants to use

igraph is a package for graphs and networks. It has a C core and uses a simple and fast graph representation allowing millions of vertices and edges. NEW FEATURES: - We use the ARPACK library for graph related eigenvalue problems, like Page Rank calculation, Kleinberg's hub and authority scores, eigenvector centrality, etc. There is also a generic interface if someone wants to use

igraph is a package for graphs/networks. It has a C core and uses a simple and fast graph representation allowing millions of vertices and edges. LINKS Release notes for the 0.5.2 version: http://igraph.sourceforge.net/relnotes-0.5.2.html Release notes for the 0.5.1 version: http://igraph.sourceforge.net/relnotes-0.5.1.html Complete list of changes: http://igraph.sourceforge.net/news.html The

igraph is a package for graphs/networks. It has a C core and uses a simple and fast graph representation allowing millions of vertices and edges. LINKS Release notes for the 0.5.2 version: http://igraph.sourceforge.net/relnotes-0.5.2.html Release notes for the 0.5.1 version: http://igraph.sourceforge.net/relnotes-0.5.1.html Complete list of changes: http://igraph.sourceforge.net/news.html The

Hello R users, I've just defended my PhD dissertation, and I'm engaging in discussions with the "ruler lady". She has some problems with my figures. The problem is that my nodes overlap the text that I've put inside of them. Here is a url for the figure: https://www.msu.edu/~wolfste4/igraph/sorter34_graphvfr.pdf (As you can see, the cluster at the center left of

Dear All, we have released version 0.6 of the igraph package today. This is a major new version, with a lot of new features, and (sadly) it is not completely compatible with code that was written for the previous igraph versions. (See "Major new features" below for details.) I have included below a list of (bigger) changes. Please see the details in the release notes and the NEWS

Dear All, we have released version 0.6 of the igraph package today. This is a major new version, with a lot of new features, and (sadly) it is not completely compatible with code that was written for the previous igraph versions. (See "Major new features" below for details.) I have included below a list of (bigger) changes. Please see the details in the release notes and the NEWS

Hello there, I am using the igraph package to build graphs from my data. If I plot a graph though, it's not easy for me to see what's going on. Does anybody know how to rearrange a graph to get a plot without too many crossing lines? Maybe other packages? Thanks a lot in advance for any pointers, -- D --------------------------------- [[alternative

Dear R users, I am trying to draw a network using igraph package. I intend to place the hub nodes (the ones with the relatively more connection with other nodes) in the center of the graph. Also, the graph need to be in the fashion that the higher the correlation between two nodes is , the closer the two nodes will be. Is there any layout that can help or any other way to do this? Thanks in

Hi R users, I am using built-in functions in igraph package to draw networks . I need to compare several network with exactly the same structure but with edge hightlighted differently. I am wondering if there is a way to save the layout so that every graph will look the same as each other except for the colors of edges. Or is there any parameter I can set for this purpose?? Thanks in advance,

I am using 'igraph' package to make some graphs of 'gene-gene interaction'. I can get a data.frame which has three columns. gene1 gene2 pvalue AGT MLR 1.2e-04 MLR 11BHSD1 1.71e-05 IFG2 11BHSD2 2.2e-07 . . . . . . . . . AGTR1 NPPA

Alberto, you simply need a font that has those characters. For example on 10.6 this works: plot.new(); plot.window(0:1,0:1); text(0.5,0.5,"??",cex=10,family="Hei") You may want to check your system for fonts that you can use (those that have chinese characters when you click on them in Font Book). There are a lot of fonts that work like STSong, STFangsong, LiSong Pro,

Hi R users, I got warning messages when installing the package, and I pasted the messages below. I checked updates that my R-studio is already the newest version. I don't know how to solve the problem. Thanks for your help. > library(igraph) Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object

Hello, I'm having trouble getting the igraph package to load on Solaris. I can get igraph to compile and install from a local directory without issues using simply "R CMD INSTALL igraph", however "library(igraph)" from within R gives the following errors: Error in dyn.load(x, as.logical(local), as.logical(now)) : unable to load shared library

Hi, I would like to be able to develop a function to plot an igraph object with lattice (trellis type displays will be usefull for grouping etc). Anyway, I mostly feeble Igraph requires that you convert two columns of data two an igraph object and to be able to plot the graph...I have tried a very, very simplistic (if not naive) approach and surprise, surprise, it didn't work. First of all,

Hi, what does this mean? --8<---------------cut here---------------start------------->8--- > graph <- graph.data.frame(merged[!v,], vertices=ve, directed=FALSE) cedta decided 'igraph' wasn't data.table aware cedta decided 'igraph' wasn't data.table aware cedta decided 'igraph' wasn't data.table aware cedta decided 'igraph' wasn't

Hello, Could you please test the solution at https://stackoverflow.com/questions/45318188/getting-error-in-function-igraph-write-graph-graphml-while-installing-igrap Specifically - install.packages("devtools") library(devtools) install_github("igraph/rigraph") Please let us know if this works Regards, -- Saint Pai On Tue, Oct 10, 2017 at 01:40:53AM +0100, Paul Smith

Been and R-user for about 5 years now in an industrial setting, and always find the mailing list most helpful. I have run into problem compiling igraph on R. I have contacted the maintainer of igraph, and he has determined that it is not an igraph problem. System is FreeBSD 7.2, R-2.10.1 [also have a sandbox machine running FreeBSD 7.3, R-2.11]. Both machines fail the installation of igraph.

Hi! I want to use R for network analysis and have tried to install the 'igraph' package. Unfortunately, the installation is aborted by an error: --snip-- gcc -std=gnu99 -I/usr/lib64/R/include -DNDEBUG -I/usr/local/include -DUSING_R -I. -Ics -Iglpk -Iglpk/amd -Iglpk/colamd -I/usr/local/include -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables