similar to: Reproducible research

Hello Everyone,   Been learning R over the past several months. Read several books and have learned a great deal about data manipulation, statistical analysis, and graphics.   Now I want to learn how to make nice looking documents and about "literate programming." My understanding is that R users normally do this using LaTeX, MiKTeX, LyX, etc. in conjuction with Sweave. An alternative

Hello, Is it possible to extend the R lexer/parser to include multiline comments like /* acomment */ ? This way I can integrate emacs org-mode with my R code, so that I can have a table of contents, section folding, html-output of source etc. e.g /* * Display Code */ #+BEGIN_SRC R foo <- function(...){ stuff } #+end_src and so on . Thanks Saptarshi

Hello dear R help members, I have found several references on how to do this, my question is if anyone is actually using them - and if there are some strong points on what to use, and how well it is working out. My goal is to be able to easily create docs from R, but to be able to share it with other researchers (who do not use LaTeX) so they could easily copy/paste the tables and edit them for

I need an analogue of "uniq -c" for a data frame. xtabs(), although dog slow, would have footed the bill nicely: --8<---------------cut here---------------start------------->8--- > x <- data.frame(a=1:32,b=1:32,c=1:32,d=1:32,e=1:32) > system.time(subset(as.data.frame(xtabs( ~. , x )), Freq != 0 )) user system elapsed 12.788 4.288 17.224 --8<---------------cut

Hi, I am wondering if there is a way to call Gnuplot from R and/or if anyone can recommend a package on CRAN capable of doing this? Thanks, Chris PS - Please cc me on the response. [[alternative HTML version deleted]]

Dear all, Is there a function in R to convert a matrix or a data.frame into an html table? Many thanks, Samuel [[alternative HTML version deleted]]

I have been looking for a way to write R-generated reports to Microsoft Word documents. In the past, I used the package R2wd, but for some reason I haven't been able to get it to work on my current set up. R version 2.15.0 (64-bit) Windows 7 Enterprise - Service Pack 1 Microsoft Office Professional Plus 2010 - Word version 14.0.6123.5001 (32-bit) I gave the package

What is the equivalent for formatted tabular output of the various very sophisticated plotting tools in R (plot, lattice, ggplot2)? In particular, I'd like to be able to produce formatted Excel spreadsheets (using color, fonts, borders, etc. -- probably via Excel XML) and formatted HTML tables (ideally through a format-independent interface), and preview them using commands within R, just as

I assume R won't easily generate nice reports (unless one starts using Sweave and LaTeX) but perhaps somebody here knows a package that can create report like output for special cases? How can I simply plot output into PDF? Perhaps you know a package I should check out? What do you guys do to create handouts (before actually publishing)? Thanks in advance, Ralf

can any one help me in customizing output(inserting 2 or more tables in a single sheet,creating table title etc.) in excel? I also need to know whether it is possible to create a page with charts and graphs in word by R? thanks in advance..... -- View this message in context: http://r.789695.n4.nabble.com/customize-output-in-Excel-and-creating-reports-in-word-tp3671447p3671447.html Sent from

Hi Is it possible to instead of getting the HTML code written to a file, get it saved as a string in an object instead? Or is there any kind of package that can do this? //Joel -- View this message in context: http://r.789695.n4.nabble.com/Save-R2HTML-as-an-object-instead-of-file-tp3066776p3066776.html Sent from the R help mailing list archive at Nabble.com.

Happy New Year all! I am looking for a good solution for keeping record of my experiments - could you please help me? My work is about analysing data... My current work-flow: 1. Everyday my bosses give me some small steps/tasks for analysing data - which are parts of one bigger/whole project. 2. Everyday I send tens of emails to bosses/colleagues to report my findings in each step. 3.

Hi R users, How can I automatically export results and graphs to a file? Thanks in advance Pedro Mota Veiga -- View this message in context: http://r.789695.n4.nabble.com/Export-Results-tp2268622p2268622.html Sent from the R help mailing list archive at Nabble.com.

I have a problem with expressions. I am trying to create a title where the parameter of interest is displayed as a Greek character. Which parameter is being considered is stored in a character variable. As an example, if I have param <- "alpha" and then do plot(0, 0, main = bquote(Parameter==.(param))) then in the title I get "Parameter = alpha", whereas I want the

Here I am again with question I'll feel foolish for asking, when I see the answer. I'm trying to produce a report and here's where I get stuck: How do I get R2HTML to produce the same number format? Particularly remove the decimal places for Par and Sal. Are there better methods to produce this type of report? Thanks, L.A. R version 2.10.0 XP

Hello, I've been trying to use odfWeave and prettyR packages to create documents with both text and graphs, but so far I haven't been very lucky... With the function R2html () in prettyR package, when I try to use a source file, which works perfectly if I run it directly form R using "source("file")", it works for the first part and then it makes a mess, i guess

Hello, I would like to save different plots and some text (like summaries, AIC, ...) on the same file. I've read the e-mails entitled "Output results to a single postscript document" written some days ago and I've tried to use the function odfInsertPlot() in the package "odfWeave" but it doesn't work on my computer (I've seen that odfWeave package depends on

Hi there, Everytime when I paste My R output in WORD, the columns couldn't line up nicely like they appear in R console. Is there a way to fix this problem? Thanks for any help! time n.risk n.event survival std.err lower 95% CI upper 95% CI 6 21 3 0.857 0.0764 0.707 1.000 7 17 1 0.807 0.0869 0.636 0.977 10 15 1

Dear All, Using odfWeave is working fine for me using code chunks <<...>>= ... @ But the inline \Sexpr{date()} is not evaluated and returns again \Sexpr{date()} instead of "Thu Apr 17 18:15:47 2008". What might be the reason for that, what do I have to look for? I'm using Windows XP, R 2.6.1, odfWeave_0.7.3 and OpenOffice 2.4. Session Info: R version 2.6.1

I have been struggling trying to write some code to produce all combinations subject to some restrictions. I thought someone might have some bright ideas. I have 11 values which fall into 5 groups. I want all combinations of 2,3, and 4 values where each value must be from a different group. The numbers in the groups are different. Here is a definition of the groups: groups <- list(gp1 =