similar to: Calculating Gwet's AC1 statistic

Displaying 20 results from an estimated 600 matches similar to: "Calculating Gwet's AC1 statistic"

2001 Jul 04
4
ext3 patch for 2.4.6 (plain or ac1)
Does the ext3 patch applies on top of the newly released 2.4.6 kernel (and/or the 2.4.6-ac1 variant) ? I want to upgrade to the new kernel and wanted to know before I run into problems if there are any known problems and if it's better to wait for an 'official' release. Thanks. Stelian. -- Stelian Pop <stelian.pop@fr.alcove.com> |---------------- Free Software Engineer
2002 Dec 05
1
ext3 Problem in 2.4.20-ac1?
Since I ain't got a better place to report this, I do it here: Kernel 2.4.20-ac1 # uptime 16:31:00 up 2 days, 22:10, 7 users, load average: 1.89, 2.20, 2.99 This is our main mailbox server. We're running ext3: # cat /proc/mounts rootfs / rootfs rw 0 0 /dev/root / ext3 rw 0 0 /proc /proc proc rw 0 0 /dev/sdb5 /boot ext3 rw 0 0 /dev/sda6 /home ext3 rw,noatime,nosuid 0 0 /dev/sdb8 /tmp
2012 Dec 27
1
Conjunction and disjunction in pubmed query
Hi: I am trying to query pubmed abstracts using the following syntax: url= "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?" search = paste(url, "db=pubmed&term=", queryTerm1, "+AND+", queryTerm2,"+OR+",queryTerm3, "+OR+", queryTerm4, "[abstract]&retmax=100&usehistory=y", sep="") docId <-
2003 Sep 11
0
Dovecot on Linux 2.6.0-test1-ac1
I've been using Dovecot on 2.6.0-test1 for quite awhile but today I jumped ahead to test5 and it broke in the way you described. http://dovecot.procontrol.fi/list/dovecot/2003-July/001943.html I used your workaround and now everyone is back in business. Thank you for the help! (I was sweating there for a bit.) --kyler
2008 Feb 18
2
Huge number
Hi, I'm trying to calculate p-value to findout definitely expressed genes compare A to B situation. I got this data(this is a part of data) from whole organism , and each number means each expression values (that means, we could think 'a' gene is 13 in A situation, and it turns 30 in B situation) To findout probability, I'm going to use Audic - Claverie Method. ( The significance
2003 Jul 16
2
Dovecot on Linux 2.6.0-test1-ac1
Hi all For various reasons I was looking into 2.6, so I installed a copy on my desktop. Everything works fine, except for dovecot - errors such as this appeared in the syslog: Jul 15 14:41:09 typhaon dovecot: Dovecot starting up Jul 15 14:41:12 typhaon imap-login: setuid(113) failed: Resource temporarily unavailable Jul 15 14:41:12 typhaon dovecot: Login process died too early - shutting down I
2008 Apr 10
5
Extending Bluecloth/Redcloth
I''d like to extend bleucloth or redcloth to support custom tags, e.g. I want to use markup like this: [pubmed:18332676] which shall be extended to: <a href="http://www.ncbi.nlm.nih.gov/pubmed/18332676">Behav Pharmacol. 2008 Mar;19(2):121-128.</a> Does anyone know, if this is possible and has some hints how to do this?! I have not decided, wether I want to use
2003 Nov 30
1
bad performance on 2.4.23
hi, - big and ugly mail. If you don't like them, delete it now :-) - I have collected and classified some information of: http://home.earthlink.net/~rwhron/kernel/bigbox.html And I observed that ext3 performance is worse than previous kernels(2.4.19...). -ac and -aa are here only as reference. Complete information is in the upper URL. dbench: Performance is worse. dbench (Numbers are in
2012 Dec 11
1
query multiple terms in PubMed abstract
Hi: I am trying to search PubMed abstracts which contains BOTH two terms: COL4A1 AND Ocular. I am using the following code: url= "http://eutils.ncbi.nlm.nih.gov/entrez/eutils/esearch.fcgi?" search = paste(url, "db=pubmed&term=COL4A1+AND+Ocular[abstract]&retmax=300", sep="") docId <- xmlTreeParse(getURL(paste(url, search, sep="")),
2013 Jan 15
0
paper - download - pubmed
Hi, I actually need to download pdfs through R code. The thing which I want to do is that, search for a paper in pubmed, which is possible by using GetPubMed function in the package "NCBI2R?". GetPubMed(searchterm, file = "", download = TRUE , showurl = FALSE, xldiv = ";", hyper = "HYPERLINK", MaxRet = 30000, sme = FALSE, smt = FALSE, quiet = TRUE,
2012 Jan 24
1
[LLVMdev] Req-sequence, partial defs
Hi, I'm having an issue with subregisters on my target. With a pseudo that writes to a 32 bit reg: %vreg20<def> = toHi16_low0_pseudo %vreg2; reg32:%vreg20 hi16:%vreg2 expands to %vreg2<def> = COPY %a2h; hi16:%vreg2 %vreg43<def> = mov 0, pred:0, pred:%noreg, %ac0<imp-use>, %ac1<imp-use>; lo16:%vreg43 %vreg20<def> =
2005 Jun 14
1
protection stack overflow??
Hi dear Rers, I am using SSOAP package to access SOAP service at NCBI. I followed the example code in SSOAP but failed. > z <- .SOAP("http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/soap_adapter.cgi", method="run_eInfo", db="pubmed", action = I("einfo")) Error: protect(): protection stack overflow what's wrong? Thanks very much. Regards
2008 Aug 04
1
Decomposing tests of interaction terms in mixed-effects models
Dear R colleagues, a friend and I are trying to develop a modest workflow for the problem of decomposing tests of higher-order terms into interpretable sets of tests of lower order terms with conditioning. For example, if the interaction between A (3 levels) and C (2 levels) is significant, it may be of interest to ask whether or not A is significant at level 1 of C and level 2 of C. The
2007 Oct 07
9
RESOLVED: Debian Xen + Broadcom NetXtreme II (IBM x3655 7985-AC1)
I have a new x3655 IBM and whenever the /etc/xen/scripts/network-bridge script starts, the ethernet would no longer work. This post isn''t about the cause, but the fix. I did a lot of tcpdumps and Googling, but I''ll spare you that. All they do is prove that yes, there is an issue. :) I tried Debian 4.0 i386/amd64 and Ubuntu 7.04 Server i386/amd64 and they all exhibit the
2005 Jun 14
0
question about SSOAP
Dear R folks: I am trying to use SSOAP (version 0.2-2) package in R (version 2.1.0,linux) to access SOAP service on NCBI (http://www.ncbi.nlm.nih.gov) its WSDL file is at http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl but some errors occured: > ncbi <- processWSDL("http://www.ncbi.nlm.nih.gov/entrez/eutils/soap/eutils.wsdl") > ff <-
2005 Aug 04
1
Where the error message comes from?
Hi all: I get the following error message that I am not able to resolve. Error in if (const(t, min(1e-08, mean(t)/1e+06))) { : missing value where TRUE/FALSE needed It appears right before the last data.frame statement. Below is the program that simulates data from one way random effects model and then computes normality and bootstrap confidence interval for
2007 Dec 14
6
Analyzing Publications from Pubmed via XML
I would like to track in which journals articles about a particular disease are being published. Creating a pubmed search is trivial. The search provides data but obviously not as an R dataframe. I can get the search to export the data as an xml feed and the xml package seems to be able to read it. xmlTreeParse("
2012 Mar 04
1
Could not compute QR decomposition of Hessian.
Hi, I created the model below, which returns me the following warning message: In sem.default(ram = ram, S = S, N = N, param.names = pars, var.names = vars, : Could not compute QR decomposition of Hessian. Optimization probably did not converge. ######### Model ######## mDPDF = data.frame(mj1,mj2,mj3,mj4,mj5,eL1,eL2,eL3,eL4,eL5,aC1,aC2,aC3,aC4,disR1,disR2,disR3,disR4,disR5,
2006 Jan 17
1
log-linear analysis - calculate treatment effects
Dear all, I have run a hierarchical log-linear analysis using loglin {stats} and came up with a specific model. loglin returns me the parameter estimates giving me an idea in which direction the observed frequencies deviate from the expected ones for my different factors. To assess the significance of any such effects I would need to calculate the ratio of the log-linear parameter
2013 Feb 22
1
How to do generalized linear mixed effects models
I want to analyze binary, multinomial, and count outcomes (as well as the occasional continuous one) for clustered data. The more I search the less I know, and so I'm hoping the list can provide me some guidance about which of the many alternatives to choose. The nlme package seemed the obvious place to start. However, it seems to be using specifications from nls, which does non-linear