similar to: Producing residual plots by time for lme object

Hi the list, I build a package. They was a mistake in it, but R CMD check did not find it. Is that normal ? Here is what Kurt gets (which is right, I did this mistake): --- 8< ---------------- * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentation object 'LongData-class': Slots for class 'LongData' Code: id other time traj

Dear all, I have a performance problem in terms of computing time. I estimate mixed models on a fairly large number of subgroups (10000) using lme(.) within the by(.) function and it takes hours to do the calculation on a fast notebook under Windows. I suspect by(.) to be a poor implementation for doing individual analysis on subgroups. Is there an alternative and more efficient way for doing

Hi the list, I am the maintainer of the package kml. I quite often receive some email about a specific bug. The answer is always the same, I tell people to remove the package Matrix, and then kml works fine. I wonder what my code is not compatible with the Matrix package. Here is a (simplified) version of the kml code : --- 8< ------------ library(longitudinalData)

I am having trouble figuring out the right form for the nlme arguments. I do have examples in Modern and Applied Statistics with S and from other sources, but I still can't figure it out. I am trying to estimate species richness (sr) in streams across minnesota. My predictor variables are depth (d), habitat diversity (habdiv), drainage area (da) and an indicator variable representing the

I have a couple of Tinn-R problems that I hope someone may be able to make some suggestions about or point me to a Tinn-R source. So far I have not found anything particularly relevant by googling on Tinn-R. NOTE: Just to be on the safe side I uninstalled both R and Tinn-R , ran some cleanup and registry cleaner software and still am having the problems. Problem One Tinn-R 2.3.7.1 R 2.13.0

Hi Sam, Is your PATH set on your user environment variables or on the system? Did you try to remove the entry for R-3.5.2 ? I have tested with a standard install, and I can't reproduce your error. I have the exact same path in my system PATH environment variable for 3.5.3, and nothing for other versions. Sorry I can't be of any more help. Cheers Joris On Mon, Mar 25, 2019 at 4:54 PM

Hi the list, I am writing a package in S4 and I do not manage to understand a bug. The "R CMD check" and the "R CMD build" both work. Here is links to the package (not on CRAN yet for the raison that I explain bellow): http://christophe.genolini.free.fr/aTelecharger/kml_0.5.zip http://christophe.genolini.free.fr/aTelecharger/kml_0.5.tar.gz Then I install the package and I

Hi all, I am noticing some strange behaviour so I am bringing to this list. In the past when I have submitted bugs to bugzilla, I have come here first for confirmation/advice. Hopefully this is appropriate. Upgrading from R 3.5.2 to R 3.5.3 seems to have elicited some strange behaviour on my Windows machine. R seems to have trouble spawning a new process on my machine. You can noticing with all

R Gurus: This sounds not a FAQ. I upgraded WinEdt from 5.4 to 5.5 , following load RWinEdt, R-WinEdt editor appears. There are more menu items and task icons in this version, but I failed to find a pull down menu or task icon to send code to R. What did I miss? > sessionInfo() R version 2.11.0 (2010-04-22) i386-pc-mingw32 locale: [1] LC_COLLATE=English_Canada.1252

Dear fellow R-users, Is there a function that does the bisection method? I was unable to find one. Thanks in advance. Gregory [[alternative HTML version deleted]]

In the latest R 2.8 alpha for Win32, if either of the commands are typed: > help("erfc") .. or .. > ?erfc the result is: No documentation for 'erfc' in specified packages and libraries: you could try '??erfc' This should be: 'help.search("erfc")', as shown in R 2.7.2 Apologies if this has already been submitted/fixed. -Mike --please do not edit

Hello, I have just installed R 2.7.0 and re-installed SciViews 0.8-9 and Tinn-R 1.19.4.7 and seem to have broken something along the way as follows. I double-click on my current .RData file in the Windoze explorer, R Console and Tinn-R load successfully (?). I can list objects in my working directory with ls() but, when I attempt to refresh any list in the R explorer tab of the Tools child

On 02/02/2010 6:20 AM, Dimitri Shvorob wrote: > Ruben Roa has kindly suggested using 'scipen' option - cf. > >> fixed notation will be preferred unless it is more than ???scipen??? digits >> wider. > > However, > > options(scipen = 50) > x = c(1e7, 2e7) > barplot(x) > > still does not produce the desired result. This is strange. I see what

I realize that R-core must be busy with the imminent release of 2.11.0, so please consider this not urgent. The NEWS file for 2.12.0 (Windows-specific) says, in part: For now, 32-bit packages with compiled code built under 2.{10,11}.x can be used, but this will be disabled before release. For me, this doesn't work without a tweak. For example, > library(mvtnorm) #Error:

Hi the list, I build a package. They was a mistake in it, but R CMD check did not find it. Is that normal ? Here is what Kurt gets (which is right, I did this mistake): --- 8< ---------------- * checking for code/documentation mismatches ... WARNING S4 class codoc mismatches from documentation object 'LongData-class': Slots for class 'LongData' Code: id other time traj

My day for dumb questions. How do I increase the type size in the Rgui console in Windows? (R-2.13.0, Windows 7) It looked to me that I just needed to change the font spec in Rconsole but that does not seem to be working. The R FAQ for Windows has a reference in Q3.4 to changing fonts, (Q5.2), but I don't see anything relevant there. Rconsole originally was: font = TT Courier New points =

I am trying to clean up some dates and I am clearly doing something wrong. I have laid out an example that seems to show what is happening with the "real" data. The coding is lousy but it looks like it should have worked. Can anyone suggest a) why I am getting that NA appearing after the strptime() command and b) why the NA is disappearing in the sort()? It happens with na.rm=TRUE

I seem to have a problem getting latex (Hmisc) to work. Any suggestions as to what I am doing wrong? Thanks library(Hmisc) aa <- data.frame(aa=1:10, bb=rnorm(10, 5, 2), cc=rnorm(10, 20, 4)) rr <- lm(cc~aa+bb, data=aa); rr latex(rr) > latex(rr) 'latex' is not recognized as an internal or external command, operable program or batch file. Warning messages: 1: In cbind(cx, cxk) :

Can anyone suggest why this file http://www.mediafire.com/?afeyhhpacaq is refusing to open for me.? I must admit I don't know all its history but the original data was taken from an OOo spreadsheet that I edited (good bit of copying and pasting and the month variable added by hand in OOo Calc) and, then,saved as a csv file. It was not originally an English language file as far as I can

Hi all, There is a compatibility issue between the package 'lme4' and my package 'kml'. I define the "[" operator. It works just fine in my package (1). If I try to use the lme4 package, then it does no longer work (2). Moreover, it has some kind of strange behavior (3). Do you know what is wrong? Any idea of how I can correct that? Thanks for your help Christophe ---