similar to: error at R CMD check

Full_Name: michael klinglemsith Version: R-1.7.1 OS: linux Submission from: (NULL) (134.134.136.4) I run: (note: ] is my unix prompt) ]./configure It seems to work, here are the messages I get from the end of configure: R is now configured for i686-pc-linux-gnu Source directory: . Installation directory: /usr/local C compiler: gcc -D__NO_MATH_INLINES

Is this a bug-- ------------------------------------------------------------------------------- <234>% R CMD Rd2dvi base.Rd Converting Rd files to LaTeX ... base.Rd Can't use an undefined value as filehandle reference at /opt/R-2.5.1/lib/R/share/perl/R/Rdconv.pm line 78. ENCS is Creating dvi output from LaTeX ... Saving output to 'base.dvi' ... cp: cannot access

For the record (and as privately discussed with Brian Ripley), happens with all recent versions of R including R-devel from today: Consider a simple a.Rd file containing the lines ================== \name{a} \title{a} \value{\code{a} \code{\link[a]{a}} \pkg{a} \item{a}{a} } ================== with these lines, I get, e.g.: ================== R CMD Rdconv --type="txt" a.Rd a

Hi the devel list. I am adapting the package.skeleton to S4 classes and methods I would have been very proud to post a new working function on this list. Unfortunately, I do not manage to solve all the problems. Mainly - sys.source does not compile a file with setClass - dumpMethod does not exists yet In the following code, thise two problems are notified by a line ################# Still

Full_Name: Kelly Black Version: 2.0.1 OS: FreeBSD 5.3 on AMD64 Submission from: (NULL) (149.106.32.93) I downloaded R-2.0.1 from the R website, ran configure then make and got an error. I will paste a copy of the output from the makefile below. The problem was when the makefile tried to run the R binary. When I came across the error I reran configure, but this time with the following arguments:

I can crash R CMD check with the following message: This shouldn't happen at /usr/local/lib/R/share/perl/R/Rdconv.pm line 1226, <rdfile> line 24. under the following circumstances -- an \itemize{} environment in the \details{} section with an item that continues on more than one line, delimited by curly brackets. It looks like \items would rather be delimited by spaces than by

When I attempt to install the online help for R.99 on Intel RH5.2, I get the following message Substitution loop at /usr/local/src/R/etc/Rdconvlib.pl line 1589, <rdfile> chunk 171 and it stops after a few files. Each time I rerun it, it gets a bit further and gives a different number at the end. I commented out the line 1589 and it works.

When I attempt to install the online help for R.99 on Intel RH5.2, I get the following message Substitution loop at /usr/local/src/R/etc/Rdconvlib.pl line 1589, <rdfile> chunk 171 and it stops after a few files. Each time I rerun it, it gets a bit further and gives a different number at the end. I commented out the line 1589 and it works.

On Mon, 30 Apr 2007 bill at insightful.com wrote: > On Tue, 10 Apr 2007 timh at insightful.com wrote: > > > I've created a .Rd file (below), then converted that to .sgml using > > R CMD Rdconv --type=Ssgm combn.Rd > combn.sgml > > The output (shown below) is missing some of the sections: > > arguments > > seealso > > examples > > If

Hello, I'm building a package on Mac OS. The build/check/install goes all ok. Also, the package gets loaded properly with library(my_package). However, when I call the help file for a given function in the package -- i.e., "?my_function", I get the following error: Error in gzfile(file, "rb") : cannot open the connection I've search for this issue, but did not find

Dear List, I'm trying to add a function that calls a Shiny App in my R package. The issue is that within my function, I'm creating objects that I'd like to pass to the app. For instance, from the example below, I'm getting "Error: object 'xs' not found". How can I pass "xs" explicitly to shinyApp()? *Under R directory:* myApp <- function(x, ...) {

It seems that there is a problem in displaying subtitle in general, independently from multi-plot display. when I do plot (c(1,2,3), c(9,8,7), type = "l") title(main = "Main title", sub ="Sub title",cex.main=2, cex.sub = 2) subtitle doesn't get displayed > --- On Sat, 11/21/09, David Winsemius <dwinsemius at comcast.net> > wrote: >

On Tue, 10 Apr 2007 timh at insightful.com wrote: > I've created a .Rd file (below), then converted that to .sgml using > R CMD Rdconv --type=Ssgm combn.Rd > combn.sgml > The output (shown below) is missing some of the sections: > arguments > seealso > examples > If instead I convert to .d (below), the same sections are missing, > and the "note"

Hello, It might be an easy question but if you have many variables to fit in the lm function, how do you take all without specifying var1+var2+...+var2100 in the terms parameter in response ~ terms? Cheers, Carol

Hi, What is the function for inverse normal transformation? Thanks, Carol [[alternative HTML version deleted]]

Hi, I got problem in using title function to create a title for multiple plots presented together by par. As can be seen in the attached file, the title is displayed truncated and the subtitle doesn't get displayed. Here is the code: par(mfrow = c(1,2)) plot(c(1,2,3), c(9,8,7)) plot(c(1,2,3), c(9,8,7)) title(main = "Main title", sub ="Sub title",outer = TRUE,

With a pretty recent version of R 2.11.0 (devel,unstable, svn 50178) on Linux I could not install version 1.5-8 of zoo (the current on on CRAN): % R-devel CMD INSTALL -l Rlib3 zoo * installing *source* package 'zoo' ... ** R ** inst ** preparing package for lazy loading ** help *** installing help indices converting help for package 'zoo' finding

Dear Axel, I've used environment for such problems. assign("xs", xs, envir = my.env) in the myApp function get("xs", envir = my.env) in the server function Best regards, ir. Thierry Onkelinx Statisticus/ Statiscian Vlaamse Overheid / Government of Flanders INSTITUUT VOOR NATUUR- EN BOSONDERZOEK / RESEARCH INSTITUTE FOR NATURE AND FOREST Team Biometrie &

Hi, How to plot the same types of graphics on the same R graphic device? Suppose that we want to plot a vector y against x (using plot for instance). How is it possible to plot y against x for different values of these two vectors on the same device so that the plots could be compared? Cheers, Carol [[alternative HTML version deleted]]

I've created a .Rd file (below), then converted that to .sgml using R CMD Rdconv --type=Ssgm combn.Rd > combn.sgml The output (shown below) is missing some of the sections: arguments seealso examples If instead I convert to .d (below), the same sections are missing, and the "note" section is included but without the necessary newline.