similar to: R GUI

What I am trying to do is use GUI function, traitr, and to call for a pdb file and save it and then display it. I want to call for it by taking it from the user and then displaying it on the screen. I am having problems with that. The line pdb <- read.pdb(""ProteinCode) where proteincode should be the name of the protein, for example 1ly2, but it always ends up being protein. My

I am trying to write a program that uses R and takes a pdb file, and converts it to a pqr file. This task is simple generally, using the website, http://pdb2pqr-1.wustl.edu/pdb2pqr/. How do you use R to input a pdb file (that is on hand) into the upload pdb file input, and run the website and give the return file to be a pqr file. Thanks for your help. -- View this message in context:

Hello, this might be little off-topic, but still... I have not found any official web forum for R users. Did I look good? If not, I'm sorry and shame on me! :-) Such forums are very probably the most common way to share information about all sorts of problems, to ask and get answer. See http://forums.opensuse.org/ as an example. Admins, developers, users, do You think to have such forum

Dear R-users, I've recently switched to Ubuntu and I've decided to use Kate to edit my R code. I really like how Kate allows one to simply pipe their code to the terminal. However, I would find it even better if I could actually get the Kate console to display error messages (or any console outputs in fact) in red and my input in a different color. The instance of xterm that Ubuntu

*Hi, I want to know how can I configure R in a Ubuntu to be a server. I am planning to use R in a Windows machine with Tinn-R, but I want R running at an Ubuntu Lucid machine. How can i do this? *Atenciosamente, Leandro Marino http://est.leandromarino.com.br/Blog (Estatístico) Cel.: + 55 21 9845-7707 Cel.: + 55 21 8777-7907 [[alternative HTML version deleted]]

I am creating a Slovak translation of an interactive website ( http://mazamascience.com/OilExport/index_sk.html ) and am running into problems with R's lack of support for the caron found in the following letters: Č/č, Š/š and Ž/ž. I am using R 2.6.1 running on a recent version of CentOS. Any information about whether these characters are supported or any possible workarounds would be

Hi, I am using R in Linux environment. How can i make plot in Linux just like in windows? thanks

There are websites using python to convert a pdb to a pqr. I was wondering if there is a simpler way to do it. We have a protein in pdb format, and want to convert that to a pqr file so that the program apbs can open it. We want to accomplish this conversion in R. Thank you for your help. -- View this message in context: http://n4.nabble.com/Converting-pdb-to-pqr-tp1475426p1475426.html Sent

Unbuntu 10.04 R 2.10 I am trying to install Rcmdr and receive the following messages: The downloaded packages are in ?/tmp/RtmpzhjDZG/downloaded_packages? Warning messages: 1: In install.packages("Rcmdr", dependencies = TRUE) : installation of package 'Rmpi' had non-zero exit status 2: In install.packages("Rcmdr", dependencies = TRUE) : installation of package

Hi, I?m trying to move to ubuntu at all, but I don?t like R in Ubuntu because it runs in the terminal, so i can?t access directly to some options R gots in Windows. Is there any R can i install in ubuntu which runs in hos own prompt or terminal?? Thanks ----- Mario Garrido Escudero PhD student Dpto. de Biolog?a Animal, Ecolog?a, Parasitolog?a, Edafolog?a y Qca. Agr?cola Universidad de Salamanca

Hello all, There is currently a (very !) lively discussions happening around the web, surrounding the following topics: 1) Is R efficient? (scripting wise, and performance wise) 2) Should R be written from scratch? 3) What should be the license of R (if it was made a new)? Very serious people have taken part in the debates so far. I hope to let you know of the places I came by, so you might be

Hi, I'm looking to move from Windows into a 64-bit Linux environment. Which is the best Linux Flavor to use within R? To install R on this environment, do I need to do any compiling? Thanks all! Axel. [[alternative HTML version deleted]]

Hi I want to simplify my problem into a prototype, how to write a function to get all the object in your current environment, e.g. .GlobalEnv, and print their mode? For example, if I have object a,b,c... in my environment, a=1;b='test';c=matrix(0,3,3)..... I want to write a function myfun(), when I run myfun(), this retrieve all the objects in my environment automatically and print

Hi dear all, In my laptop(ubuntu 11.10 64bit), I maintained a released R (2.14) and a developmental R, I can specify qplot(..., alpha = ) in R 2.14 , but when I try to use transparency in developmental R, I got a warning message and the plot is clearly not I want. minimal example: > qplot(data = mtcars, x = mpg, y = cyl, alpha = cyl) Warning message: In grid.Call.graphics(L_points, x$x, x$y,

Hi dear all, In my laptop(ubuntu 11.10 64bit), I maintained a released R (2.14) and a developmental R, I can specify qplot(..., alpha = ) in R 2.14 , but when I try to use transparency in developmental R, I got a warning message and the plot is clearly not I want. minimal example: > qplot(data = mtcars, x = mpg, y = cyl, alpha = cyl) Warning message: In grid.Call.graphics(L_points, x$x, x$y,

Hi dear all I am currently using Ubuntu 9.10 (karmic) and R 2.10, I can find a R release that support "karmic" in cran under ubuntu directory, I plan to update my laptop to Ubuntu 10.04 after April 30, since I have to use some new features or new version in it, e.g. QT 4.6, I don't know if there is going to be a R release that will support this newly released Ubuntu? Thanks in

iommu_domain_alloc returns NULL on error so replace an incorrect IS_ERR check with a NULL check. The Coccinelle semantic patch used to find this issue is as follows: @@ expression e; statement S; @@ *e = iommu_domain_alloc(...); if (IS_ERR(e)) S Signed-off-by: Amitoj Kaur Chawla <amitoj1606 at gmail.com> --- drivers/gpu/drm/nouveau/nvkm/engine/device/tegra.c | 2 +- 1 file changed, 1

Hi dear all, I am wondering if there is a function existing in R that did the quadratic bezier curve interpolation? I hope to generate a bezier curve based on three sets of points: two end of the line and a control point. Thanks in advance. Tengfei -- Tengfei Yin MCDB PhD student 1620 Howe Hall, 2274, Iowa State University Ames, IA,50011-2274 [[alternative HTML version deleted]]

Hi! Seeking pardon from the experts, but I have a basic usage question that I could not find a straightforward answer to. I have a two node cluster, with two bricks replicated, one on each node. Lets say one of the node dies and is unreachable. I want to be able to spin a new node and replace the dead node's brick to a location on the new node. The command 'gluster volume

Hello, I need a command. I have a lot of data in different dataframes(auto.0a, auto.0b, auto.0c, auto.5Na,...), that has similar names. I could print the names all at once wih a loop with the command paste(), see below: