Displaying 14 results from an estimated 14 matches similar to: "Merging and extracting data from list"
2012 May 24
3
transform 1 col to 2 col
Dear All
How can I transform 1 column to 2 columns in R?
211217_s_at
GO:0005249
211217_s_at
GO:0005251
211217_s_at
GO:0005515
211217_s_at
GO:0015271
211217_s_at
GO:0030955
211217_s_at
GO:0005249
211217_s_at
GO:0005251
211217_s_at
GO:0005515
211217_s_at
GO:0015271
211217_s_at
GO:0030955
Best Wishes,
Soheila
[[alternative HTML version deleted]]
2010 Apr 29
1
Using plyr::dply more (memory) efficiently?
Hi all,
In short:
I'm running ddply on an admittedly (somehow) large data.frame (not
that large). It runs fine until it finishes and gets to the
"collating" part where all subsets of my data.frame have been
summarized and they are being reassembled into the final summary
data.frame (sorry, don't know the correct plyr terminology). During
collation, my R workspace RAM usage goes
2007 May 23
2
problem with read.table
Dear all,
I try to use read.table to get the data from a tab delimited file, and some
of the data is shown below:
3185 heterogeneous nuclear ribonucleoprotein F
3187 heterogeneous nuclear ribonucleoprotein H1 (H)
3188 heterogeneous nuclear ribonucleoprotein H2 (H')
3189 heterogeneous nuclear ribonucleoprotein H3 (2H9)
3190 heterogeneous nuclear ribonucleoprotein K ///
2003 Sep 08
2
Re: clustering polypeptide sequences
Hi Peter,
You didn't give a very specific example, but it seems to me that what
you wish to do is not really complicated. I suppose you have created a
table of sequences vs. say hyprophobicity, charge, etc..., something like...
seq hydroph arom
b0001 0.104762 0.000000
b0002 0.035122 0.065854
b0003 0.024193 0.070968
b0004 -0.096729 0.084112
b0005 -0.973469 0.091837
b0006
2009 Mar 06
2
sm.options
Hi,
I am doing kernel density plots, and am trying to make the lines thicker. I
comparing three groups, in sm.density.compare. I tried changing lwd to make
the line sthicker right on the density compare call, but was not able to do
it. There is not an option in sm.options to specify line thickness, as well
as cex.ylab or cex.xlab- I tried it and it does not change the thickness of
the lines.
2010 Feb 10
2
How to create probeAnno object?
Hi,
I want to use segChrom() method in tilingArray package. For that I need to create a probeAnno object. I could not find much much info by ?probeAnno. I need help in creating probeAnno object.
Snap shot of the file(.txt):
chr1 2500014 2500038 + 0.232689943122845
chr1 2500039 2500063 + 2.60502410304227
chr1 2500062 2500086 + 0.0756595313279895
chr1 2500080 2500104 + 0.78574617788405
chr1
2009 Dec 17
2
some help regarding combining columns from different files
Dear all,
Here is my code which am using to combine 5th column from different data
sets.
Here is the function to do my job
genesymbol.append.file <-NULL
gene.column <- NULL
readGeneSymbol <- function(files,genesymbol.column=5){
for(i in fnames){
temp <- read.table(fnames,header=T,sep="\t",stringsAsFactors=F,quote="\"")
2017 Sep 19
3
remove quotes from matrix
Dear all;
Thanks. Here are the dput results as Duncan suggested.
Regards,
Greg
structure(list(Sub_Pathways = structure(c(3L, 3L, 3L, 3L, 3L), .Label =
c("Acetylated_Peptides",
"Advanced_Glycation_End-product", "Alanine_and_Aspartate", "Aminosugar",
"Ascorbate_and_Aldarate", "Carnitine", "Ceramides", "Creatine",
2017 Sep 19
0
remove quotes from matrix
Works fine for me. What do you object to in the following?
Calling the above df "d",
> dm <- as.matrix(d)
> dm
Sub_Pathways BMI_beta SAT_beta VAT_beta
1 "Alanine_and_Aspartate" " 0.23820" "-0.02409" " 0.94180"
2 "Alanine_and_Aspartate" "-0.31300" "-1.97510" "-2.22040"
3
2017 Sep 19
0
remove quotes from matrix
On 19/09/2017 9:47 AM, greg holly wrote:
> Hi all;
>
> I have data at 734*22 dimensions with rows and columns names are
> non-numeric.When I convert this data into matrix then all values show up
> with quotes. Then when I use
> x1= noquotes(x) to remove the quotes from the matrix then non-numeric row
> names remain all other values in matrix disappear.
>
> Your help is
2017 Sep 19
3
remove quotes from matrix
Hi all;
I have data at 734*22 dimensions with rows and columns names are
non-numeric.When I convert this data into matrix then all values show up
with quotes. Then when I use
x1= noquotes(x) to remove the quotes from the matrix then non-numeric row
names remain all other values in matrix disappear.
Your help is greatly appreciated.
Greg
[[alternative HTML version deleted]]
2003 Dec 01
0
No subject
<<<<<<<<<<<<<
I connect my homedir from the testserver and start Lotus Notes.
Lotus Notes is infamous for it's sensitivity for 'non-optimal' network
connections. Notes tries to lock certain files and complains immediately if
that fails.
> 3. does the log message always fail at the same offset/count:
> (fcntl_lock: lock failed at offset
2003 Oct 27
92
Help
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
dragen@pbsi.org ?rta:
| I am hacing trouble. I can see my linux box from my windows box, I can
connect
| and browse but I cant delete or modify files. Do I have something wrong?
|
| The is my smb.conf
|
| [global]
| netbios name = dragenlinux
| server string = "DragenLinux"
| workgroup = WORKGROUP
| security = share
| log file =
2023 Feb 16
0
Atender por favor
Al correo pkg-xen-devel at lists.alioth.debian.org le mand? un correo de invitaci?n pero no he recibido respuesta alguna. Dentro del correo hay una invitaci?n para un evento a nivel nacional que liderar? un experto en el tema sobre la Protecci?n Contra Demandas Laborales. Se llevar? a cabo el 7 de Marzo por zoom.
Es un curso dirigido a todo personal involucrado en el proceso de contrataci?n