Displaying 20 results from an estimated 3000 matches similar to: "R with atlas in ubuntu karmic 64"
2009 Jul 06
0
Student research assistant, Part-time, Max Planck Institute, Berlin (Germany)
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The Center for Adaptive Behavior and cognition (ABC) at Max Planck
Institute, Berlin (Germany) is looking for Student research assistants.
We work on a mixed environment of R and Java. Skills on both would be a
plus, but some R knowledge (or willingness to learn) should suffice.
Requirements:
You must be enrolled in a German University.
You must have
2009 May 27
1
a simple trick to get autoclose parenthesis on windows
Hi,
This is a simple trick to get autoclose parenthesis on windows.
If you like how StatET autocloses parens, but like to use the lighter
Vanilla R, you can use autohotkey (http://autohotkey.net) to provide
this functionality.
Simply put the below code in a text file, rename extension as .ahk and
doubleclick on it to execute.
------------------ code starts here 8< ------------------
;
2009 May 27
3
alternative to built-in data editor
Hi all,
I often have to peek at large data.
While head and tail are convenient, at times I'd like some more
comprehensive.
I guess I debug better in a more visual way?
I was wondering if there's a way to override the default data editor.
I could of course dump to a txt file, and look at it with an
editor/spreadsheet, but after doing it a few times, it gets boring.
Maybe it's time for
2009 Oct 22
0
dgTMatrix --- [, , drop=F] strange behavior, Matrix 0.999375-20
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Hi,
I have something strange here...
I want to subset a large sparse matrix, with the subset being still in
sparse form. Easily achievable with mm[i,,drop=F] , right? Well, it
doesn't work on the matrix I'm working on.
This is a very large wikipedia Matrix (now I can play with it as I just
got 16Gb of memory):
> mm at Dim
[1] 793251
2009 Apr 30
1
How do I set the working directory when using ESS and R under windows?
Hi,
While I'm a devoted vim user, I'm testing ESS :)
How do I set the working directory when using ESS and R under windows?
When I try to launch R, it asks for a directory. In windows, it simply
doesn't let you pick a directory on the 'open' dialog.
It may be a problem with windows server 2008 64 bit, though, as it seems
really basic. Thanks.
Best,
-Jose
--
Jose Quesada,
2009 May 08
1
Rmysql linking to an old-ish mysql build
Hi,
I'm trying to get Rmysql to work o windows server 2008 64-bit.
I have the latest build of mysql installed (mysql-5.1.34-winx64).
When trying to load Rmysql, I got a warning that Rmysql is linking to an
old-ish mysql build (5.0.67).
I could do some basic stuff (the connection works) but it breaks when
trying to read a large table.
So I set up to use the buld 5.0.67 that Rmysql likes.
10
2009 Jun 07
2
Scrolling behavior in View()
Hi,
I've realized that the scrolling behavior in View() is unlike most other
applications. It seems that the minimum scroll size is very large for
large objects( i.e., a vector of 1M integers), and it might be that this
scroll is proportional to the size of the object.
Try this:
a = 1:1000000
View(a)
Click once on the scroll arrow down. It will move to item 1001.
It could be that the scroll
2009 Oct 24
1
operations on sparse matrices, and dense intermediary steps
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Hi,
I'm doing some basic operations on large sparse matrices, for example
getting a row.
it takes close to 30 seconds on a 3Ghz machine, and shots the memory
usage up to the sky.
I suspect there are dense intermediary steps (which, if true would
defeat the purpose of trying to use sparse representaitons).
As much as I try understanding the
2012 Oct 13
0
[R-sig-hpc] Debian/Ubuntu + threaded BLAS/ATLAS (solved)
On 15 March 2012 14:09, Simon Urbanek <simon.urbanek@r-project.org> wrote:
> I thought I'll post this here since I could not find an answer anywhere I
> searched: how to setup R with threaded BLAS on Debian/Ubuntu.
>
> First, neither Debian nor Ubuntu come with optimized ATLAS binaries,
> simply because by definition they need to be optimized for a particular
>
2008 Aug 29
1
(Current) Ubuntu : r-base-dev seems incompatible with atlas-base-dev.
Emmanuel,
On 30 August 2008 at 00:04, Emmanuel Charpentier wrote:
| Dear list,
|
| Setup : Ubuntu Hardy + updates + backports + security + R repository on
| a 3.2 GHz PIV dual-core processor.
|
| Bitten (again...) by the "I'll optimize my setup" bug, I tried to test
| atlas. Following Dirk's advice on a not-so-recent post to R-help, I
| tried "apt-get install -s
2009 Mar 16
2
R-code in html help pages: syntax highlighting
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Hi,
A follow up to my previous post. It'd be good to have syntax
highlighting in the html help pages. There is highlight
(http://www.andre-simon.de/) which seems to be open source. Since code
is delimited in the help file format, it should not be too difficult
to run a highlighting program (actually, vim and emacs do this too)
recursively and
2009 Mar 14
0
Comparison of data analysis packages: R, Matlab, SciPy, Excel, SAS, SPSS, Stata - Brendan O'Connor's Blog
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Hi All,
I found an interesting thread discussing R and other packages here:
http://anyall.org/blog/2009/02/comparison-of-data-analysis-packages-r-matlab-scipy-excel-sas-spss-stata/
Plenty of well-reasoned comments.
I thought it may be informative for people on this list.
Best,
- -Jose
- --
Jose Quesada, PhD.
Max Planck Institute,
Center for
2009 Mar 16
0
dpaste, pastebin etc. Syntax highlighting for R?
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Hi All,
There are many sites to get bite-sized chuncks of code.
The nice thing is that they use syntax highlighting.
Examples:
http://dpaste.com/
http://pastie.org/
http://pastebin.com/
Twitter with a link to a syntax highlighting site would do wonders.
There are plugins for most (good) editors to post directly to the site
from the editor.
2009 Mar 10
1
using chm help files under linux
Hi,
Chm (compiled help) is a microsoft invention. It's the default help
system under windows, but not so under linux.
I found that (at times) I like better how chm help looks.
Since there are chm viewers under linux, using chm help files should
be possible.
Has anybody tried to set R so it opens chm by default? I'm sure
there's some flag or Rprofile var that could get this done.
2009 May 08
2
Vim R plugin-2
Dear R users,
People who uses vim in Linux/Unix may be interested in checking the
plugin for R that I'm developing:
http://www.vim.org/scripts/script.php?script_id=2628
The plugin includes omni completion for R objects, code indentation
and communication with R running in a terminal emulator (xterm or
gnome-terminal). This last feature was already present in Johannes
Ranke's plugin.
2011 Nov 10
2
parallel BLAS for Ubuntu 11.10
Has anyone succeeded in getting a parallel BLAS, such as Goto's BLAS,
installed on a machine running Ubuntu 11.10?
I currently have the libatlas3gf-base package installed on a machine
with an AMD Athlon X4 processor. I tried to install the
libopenblas-base and libopenblas-dev packages but there seemed to be a
glich related to having both libopenblas and libatlas3gf installed so
that when I
2008 May 28
1
optimized linear algebra library on Lenny
Hi,
I'd like to install the optimized libraries on my Thinkpad with an Intel
Core Solo chip, which apparently supports the following instruction
sets: MMX, SSE, SSE2, SSE3 instruction sets, XD-Bit.
In a recent r-help message, the following was said (by Dirk I think):
<quote>
Yes, on Ubuntu, use 'apt-get install atlas3-base' for basic tuned Atlas, or
'apt-get install
2009 Jan 31
1
Test Driven Development in R
Hi,
I wonder what kind of interest there is on Test Driven Development (TDD) in R.
Test Driven Development consists of writing the test before the function, and
iteratively build the function until it passes the test.
Python and Ruby (specially Ruby) have very strong test-oriented cultures. In
fact, in Ruby at least the custom is to do TDD and lately Behavior-driven
development (BDD). In BDD,
2009 Sep 09
1
Audio problems in karmic-9.10
I am running wine 1.1.29 in kubuntu karmic-9.10 64-bit, and I am having a problem with audio in wine -- namely, there is none. The problem seems to be that in jaunty, there are several files installed in /usr/lib32/alsa-lib that are needed to support audio in wine, as part of the ia32-libs package. In karmic, those files are not present in the package -- there are only a couple of bluetooth
2010 Feb 11
1
Problems with ubuntu karmic x64
Hello.
I've tried to install R on ubuntu and all succeeded untill I searched for
the icon to execute, simply didn't appear anywhere.
I wrote in terminal:
*sudo gedit /etc/apt/sources.list*
then
added with :
*##EstadÃstica con R
deb http://cran.es.r-project.org/bin/linux/ubuntu karmic/*
saved,
*sudo apt-get update*
and
*sudo apt-get install r-base*
as instructions say.
Then I tried to