similar to: vignettes: .png graphics or pre-compiled .pdf

Hi, is it possible to have non-Sweave vignettes(*) in inst/doc/ be listed under 'Downloads' on CRAN package pages? For instance, in my R.rsp package I have a inst/doc/report.pdf (part of the source *.tar.gz) that is not detected/listed. The PDF is not based on a Sweave vignette but an *.tex.rsp vignette that is dynamically created via inst/doc/Makefile. It is listed (*) BTW, can the

[Env: OS: Win Xp; R 2.15.2; IDE: eclipse/StatET] Each time I update my heplots package, I get warnings from R CMD check on R-Forge, * checking sizes of PDF files under ?inst/doc? ... WARNING ?gs+qpdf? made some significant size reductions: compacted ?HE-examples.pdf? from 739Kb to 366Kb and upon submission to CRAN, a message from maintainers: On CRAN now: but again there were warnings

Now that R 3.0.0+ supports non-Sweave vignettes, R-exts \S 1.4.2 seems to imply that it is possible to include both Sweave and knitr vignettes in a single package. I'm wondering if anyone has tried this and/or if there are some hidden gotchas putting this into practice, and concerned about creating problems with CRAN checks if I try this. Consider two vignettes: pkg/vignettes/vign1.Rnw,

List, I would like to set a variable to hold, say, the size of my plots in a Sweave document. i.e. something like the following in my '.Rnw' file: ============================================================================== smallPlotSize = 4 <<fig1, echo=false, results=hide, height=smallPlotSize, width=smallPlotSize, fig=true>>= dat <- read.table("

I am having problem making ggplot2, tikzDevice, and knitr working together. I used a very simple example: ---------------------------example.Rnw----------------------------- \documentclass[preview]{standalone} \begin{document} \begin{figure} <<fig1,eval=TRUE,echo=FALSE,dev='tikz'>>= library(ggplot2) qplot(displ, hwy, data = mpg, colour = factor(cyl)) @ \end{figure}

Dear all, In my package I have a computational expensive Rnw file which can't pass R CMD check. Therefore I set eval=FALSE in the Rnw file. But I would like to have the pdf vignette generated by the Rnw file with eval=TRUE. It seems to me a static pdf vignette is an option. Any suggestions on this? Thanks, Zhu Wang **Connecticut Children's Confidentiality Notice** This e-mail

[Env: Win Xp / StatET 2.0 / R 2.15.0] In my heplots package I extended the HE-examples.Rnw vignette under inst/doc. The package passes R CMD check on my machine: * using log directory 'C:/eclipse-3.7/heplots.Rcheck' * using R version 2.15.0 (2012-03-30) * using platform: i386-pc-mingw32 (32-bit) ... * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files

Sorry, I forgot to include a reproducible example on my last e-mail but here it is: Since the file is large to be included here: The path to the foo.Rnw examples is: www.stat.umn.edu/~charlie/Sweave/foo.Rnw and is suppossed to produce a pdf like this one: http://www.stat.umn.edu/~charlie/Sweave/foo.pdf I have downloaded MiKTEX but I don't know how to make it work. Sweave and Stangle seem to

I'm trying to (re)learn Sweave and run into some problems. I use now ubuntu (8.10), emacs + ess. Slowly getting upto speed on ess. I have a complete (hopefully) .Rnw file, but the resulting .tex will not compile. The file does not contain anything exotic, but it produces pdf figures, and that is where the problems come: library(tools) > Sweave("varioCoo.Rnw") Writing to file

Dear all, While R CMD check and R CMD INSTALL have always created the vignettes on R-2.12.1 or any earlier versions of R, I am no longer able to build the vignettes on R-2.13.0. Instead R CMD check gives me the following output: * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... WARNING Package vignette(s) without corresponding PDF:

Hello, I'm trying to rebuild a package (using R version 3.3.2 (2016-10-31)) that has not seen any changes since it was last built without problems in previous R versions. It fails during vignette building with: ---<--------------------cut here---------------start------------------->--- $ R CMD build diveMove * checking for file ?diveMove/DESCRIPTION? ... OK * preparing ?diveMove?: *

On 18/02/2018 9:06 PM, Michael Hannon wrote: > Greetings. The group that I work with has just started using the approach > outlined in Karl Broman's handy primer: > > http://kbroman.org/pkg_primer/pages/vignettes.html > > to create vignettes for a couple of R packages. > > This works fine as long as we have a current Rmd version of the vignette. But > we

It is stated in R-exts that Sweave files (.Rnw) are either processed in /vignettes or /inst/doc, not both. Furthermore, it is stated that external manuals and other files in /inst/doc will be installed. This behaviour has been used to deal with the situation where a package has two "vignettes", one that is easily processed and one that has a long running time. This could be done by

In an Sweave slide, I want to use sem::read.moments() and sem::specify.model(), which work by using scan() to read the following lines, up to the first blank line. However, Sweave throws an error: > Sweave("sem-thurstone.Rnw") Writing to file sem-thurstone.tex Processing code chunks ... 1 : term hide (label=arrests-setup) 2 : echo term hide (label=thurstone-data) Error:

Marc, >I have a large .Rnw file and was in the process of doing some debugging. >I had set some R chunks to 'eval=false' in the process. This resulted in >some R objects not being created that were in turn used in the >subsequent \Sexpr's. I have often the same problem, I'm using a construct like : <<eval=F>>= x <- rnorm(100) @ I have

Hi, as far as I understand it, the new R devel feature of processing non-Sweave vignettes will (a) locate any "[.][RrSs](nw|tex)$" or ".Rmd" files, (b) check for a registered vignette engine, (c) process the file using the registered "weave" function, (d) and possibly post process the generated weave artifact (e.g. a *.tex file). I'd like to propose to extend

I?m preparing a package (fastR) for submission to CRAN, but the vignette index keeps going AWOL, or at least R CMD check ?as-cran thinks so. I?ve tried several things and gave myself the weekend to think of other things, but I can?t figure it out. Perhaps someone on the list can lend a hand. Here?s one example situation, where I build the index.html file myself and put it in inst/doc/index.html

I'm adding a couple of vignettes to an existing package. When I make a change to the sweave file, and run the check command, c:\conifers\trunk>R CMD check rconifers I get the following message(s) in the 00check.log file: * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... WARNING Package vignette(s) without corresponding PDF:

Thanks, Duncan. The files in question are Emacs Org-mode files, and I think these are more or less isomorphic to Rmd files, but I haven't used Org-mode in a long time, so I think the mapping (Org-mode ==> Rmd) would be painful. -- Mike On Mon, Feb 19, 2018 at 1:20 AM, Duncan Murdoch <murdoch.duncan at gmail.com> wrote: > On 18/02/2018 9:06 PM, Michael Hannon wrote: >>

On 19/02/2018 5:47 AM, Michael Hannon wrote: > Thanks, Duncan. The files in question are Emacs Org-mode files, and I > think these are more or less isomorphic to Rmd files, but I haven't > used Org-mode in a long time, so I think the mapping (Org-mode ==> > Rmd) would be painful. If they aren't LaTeX then they won't be able to masquerade as Sweave files, so things are