similar to: Frequency

Hi, I have huge matrices in which the response variable is in the first column and the regressors are in the other columns. What I wanted to do now is something like this: #this is just to get an example-matrix DataMatrix <- rep(1,1000); Disturbance <- rnorm(900); DataMatrix[101:1000] <- DataMatrix[101:1000]+Disturbance; DataMatrix <- matrix(DataMatrix,ncol=10,nrow=100); #estimate

Hi, I need to permute the rows of a matrix, where each row is independently rearranged. A simple solution is this: shuffled <- datamatrix <- matrix(1:24, ncol = 4) for (i in 1:nrow(datamatrix)) { shuffled[i, ] <- sample(datamatrix[i, ]) } > datamatrix [,1] [,2] [,3] [,4] [1,] 1 7 13 19 [2,] 2 8 14 20 [3,] 3 9 15 21 [4,] 4 10 16 22 [5,]

In datamatrix[, "y"] == datamatrix[, "y"][-1] : longer object length is not a multiple of shorter object length out = c(FALSE,datamatrix[,'y'] == datamatrix[,'y'][-1]) and I do not know why I get that error, the resulting out matrix is somehow one row larger than datamatrix... all I try to do is filter matrix by dropping rows where [,'y'][-1] ==

Hi All, I have a 1000x1000000 matrix. The calculation I would like to do is actually very simple: for each row, calculate the frequency of a given pattern. For example, a toy dataset is as follows. Col1 Col2 Col3 Col4 01 02 02 00 => Freq of ?02? is 0.5 02 02 02 01 => Freq of ?02? is 0.75 00 02 01 01 ? My code is quite simple as the following to find the pattern ?02?.

Hi. I have been looking at the PCAproj function in package pcaPP (R 2.4.1) for robust principal components, and I'm trying to interpret the results. I started with a data matrix of dimensions RxC (R is the number of rows / observations, C the number of columns / variables). PCAproj returns a list of class princomp, similar to the output of the function princomp. In a case where I can

Hi list, I'm performing a series of confirmatory factor analysis on different groupings of items from data collected with questionnaires. There are some missing values. For those sets with no missing values I call factanal(datamatrix,factors=n) where datamatrix is a table of all observations for the items under investigation. This call fails when there are missing values. help(factanal)

Hello R users, I'm wondering whether it is possible to manage big data set in R? I have a data set with 3 million rows and 3 columns (X,Y,Z), where X is the group id. For each X, I need to run 2 regression on the submatrix. I used the function "split": datamatrix<-read.csv("datas.csv", header=F, sep=",") dim(datamatrix) # [1] 2980523 3

Hi: I have a dataframe containing comma seperated group of words such as milk,bread bread,butter beer,diaper beer,diaper milk,bread beer,diaper I want to output the frequency of occurrence of comma separated words for each row and collapse duplicate rows, to make the output as shown in the following dataframe: milk,bread 2 bread,butter 1 beer,diaper 3 milk,bread 2 Thanks for help! deb

Hi, Here in R, I need to load a huge file(.csv) , its size is 200MB. [may come more than 1GB sometimes]. When i tried to load into a variable it taking too much of time and after that when i do cbind by groups, getting an error like this " Error: cannot allocate vector of size 82.4 Mb " My requirement is, spilt data from Huge-size-file(.csv) to no. of small csv files. Here i will give

Hello R users, I'm trying to replace numerical values in a datamatrix with strings. R does this except for numbers under 10000 starting with a 9 (eg 98, 970, 9504 etc). This is really weird and I wondered whether someone had encountered such a problem or knows the solution. I'm using the next script: test_1 <- read.table("5+ref_151111clusters3.csv", header = TRUE, sep =

Hi all, I am wandering.. is it possible to cluster data which is in a single column ? for example.. I have some data as follows: 4013 7362 7585 9304 11879 14785 21795 30500 30669 30924 33988 36975 40422 42911 50501 51593 53729 54338 55497 57337 61993 62601 66229 69815 69933 70760 71340 75921 83972 90134 91061 . . . is it possible to cluster this data since it is in a single column ? I have

Dear All: I tried to use heatmap.2 to generate hierarchical clustering using the following command: heatmap.2(datamatrix, scale="row", trace="none", col=greenred(256), labRow=genelist[,1], margins=c(10,10), Rowv=TRUE, Colv=TRUE) datamatrix is subset of a RMA normalized data subset by a genelist. The problem is a lot of times, the z-score in key are from, like -5 to 15 or

Hi here i have a code to split a csv file as per group of line. The code given below, ------------------------------------ SplitCSVByLine <- function(DataMatrix,Destination,NoOfLineToGroup) { input <- file(DataMatrix, "r") fileNo <- 1 repeat { myLines <- readLines(input, n=NoOfLineToGroup) if (length(myLines) == 0) break

Dear Mailinglist, I just set up an R 2.9.1 environment with Rcmdr 1.4-6 on Ubuntu Jaunty 9.04. As I'm from Germany my $LANG variable is set to "de_DE.UTF-8". Now, when I open up Rcmdr and try to edit a new datamatrix there is no edit window appearing: Datenmatrix <- edit(as.data.frame(NULL)) ERROR: invalid device In addition, there are plenty of warning messages in the

Just on the off chance that Canadian Asterisk users might be interested in a place to discuss topics specific to the "great white north" (sources, services, telcos, etc.), I created the asterisk-canada mailing list: http://lists.syonex.com/mailman/listinfo/asterisk-canada or asterisk-canada-subscribe@lists.syonex.com Cheers! John

Dear list, I need to change a value within a particular line of a plain text file with characters and numbers, and I haven't found any way of doing this by using R. What I have a is a file that doesn't have tabular data (so, I think that 'read.table' or 'read.delim' are not the right tools for this), but some text, and I now exactly the row that has to be modified and the

Hi, I've got a small vm server running kvm + libvirt, and I made a simple shell script that allows users to ssh in and control their vms (power off, etc). However, one of my users uses the french canadian keyboard layout on her home computer, and upon being told "escape character is ^]" expected to need to press ctrl+right-alt_] (] being in the same location it is on a US keyboard).

Hello R list members, I'm a bio informatics student from the Leiden university (netherlands). We were asked to make a program with different clustering methods. The problem we are experiencing is the following. we have a matrix with data like the following research1 research2 research3 enz sample1 0.5 0.2 0.4 sample2 0.4

A stupid question but does anyone know how to express the actual colours used by the main Canadian political parties? I want to do a couple of ggplot2 plots and have lines or rectangles that accurately reflect the party colours. I can probably play around with RColorBrewer or something to figure it out but if some some already has got them it would save me some time especially with the NDP

Hi, Does anyone know of Canadian VoIP termination providers? I have Canadian customers and would like to provide Canadian dial in and dial out (canadian callerid). Thanks!