Displaying 20 results from an estimated 1000 matches similar to: "Winbugs under R's error message"
2009 Oct 03
1
Why do I have the error message?
Dear R lists,
I ran Winbugs under R. I could get the results, but I kept getting the error messages:
Error in file(con, "wb") : cannot open the connection
In addition: Warning messages:
1: In file.create(to[okay]) :
cannot create file 'c:/Program Files/WinBUGS14//System/Rsrc/Registry_Rsave.odc', reason
2012 Jul 09
1
R to winbugs interface
Hello everyone,
I need some help regarding calling WinBUGS from R. I
have a model for WinBUGS and an R code which calls WinBUGS. On running the
code I am being shown the error message :
Error in file(con, "wb") : cannot open the connection
In addition: Warning messages:
1: In file.create(to[okay]) :
cannot create file 'c:/Program
2012 Feb 01
1
problem working directory WinBUGS using R
Hi,
I am trying to use WinBUGS using R, but i am having some problems using
bugs function:
out <- bugs(data = win.data, inits = inits, parameters.to.save = params,
model.file = "model.txt",
n.thin = nt, n.chains = nc, n.burnin = nb, n.iter = ni, debug = TRUE, DIC =
TRUE, working.directory = getwd())
ls()
WinBUGS file is in working directory=D:/Line/documents but R looks for
2012 Feb 07
1
R2WinBUGS error message
Hi!
I am new to BUGS and running BUGS from R. I am trying to run a regression
model from R, however I have this error message:
Error in file(con, "wb") : cannot open the connection In addition: Warning
messages:
1: In file.create(to[okay]) : cannot create file 'c:/Program
Files/WinBUGS14//System/Rsrc/Registry_Rsave.odc', reason 'Permission denied'
2: In file(con,
2011 Jan 14
1
R2WinBUGS-Windows 7
Dear all,
I'm having a slight issue with R2WinBugs.... it cannot detect where WinBUGS is located.
Q: How can I change the default path?
Any advice is greatly appreciated. Thanks.
Regards
Erica
I'm using R2WinBUGs (R version 2.21.1) on windows platform (Windows 7).
I have downloaded WinBUGS14.exe and patch 1.4.3.
As i'm working with Windows 7 (similiar issues to Vista occur),
2009 Jul 07
1
R2WinBUGS under Linux/WINE fails
Hi,
I'm running wine-1.0.1, OpenBUGS 3.0.3, R 2.9.0, and R2WinBUGS on a Redhat
Enterprise Linux machine.
Following various peoples' suggestions...
This works perfectly (yay!): wine Z:/opt/OpenBUGS/winbugs.exe
Within R, however, I get this:
(setup the example from ?bugs, then....)
R> schools.sim <- bugs(data, inits, parameters, model.file, n.chains=3,
2012 Dec 04
1
Winbugs from R
Hi,
I am trying to covert a Winbugs code into R code. Here is the winbugs code
model{# model’s likelihoodfor (i in 1:n){time[i] ~ dnorm( mu[i], tau ) # stochastic componenent# link and linear predictormu[i] <- beta0 + beta1 * cases[i] + beta2 * distance[i]}# prior distributionstau ~ dgamma( 0.01, 0.01 )beta0 ~ dnorm( 0.0, 1.0E-4)beta1 ~ dnorm( 0.0, 1.0E-4)beta2 ~ dnorm( 0.0, 1.0E-4)#
2009 Oct 08
1
Why do I have the following error message?
Dear R-help lists:
Hello!
I ran WinBUGS under R using the function "bugs".
But I kept having the following error message:
Error in FUN(X[[3L]], ...) :
.C(..): 'type' must be "real" for this format
Why did I have the error message?What's the problem?How to get rid of the error message?
Thank you very much for your help!
Best wishes
Zhongjun Lin
2012 Oct 03
1
Errors when saving output from WinBUGS to R
Dear all
I used R2WinBUGS package's bugs() function to generate MCMC results. Then I
tried to save the simulation draws in R, using read.bugs() function. Here is
a simple test:
######################
library(coda)
library(R2WinBUGS)
#fake some data to test
beta0=1
beta1=1.5
beta2=-1
beta3=2
N=200
x1=rnorm(N, mean=0,sd=1)
x2=rnorm(N, mean=0,sd=1)
x3=rnorm(N, mean=0,sd=1)
lambda2= exp(beta0+
2008 Aug 22
2
WinBUGS with R
Dear Users,
I am new to both of things, so do not blame me too much...
I am busy with semiparametric regression and use WinBUGS to sample
posteriors.
The code to call Winbugs is as follows:
data <- list("y","X","n","m") #My variables
inits.beta <- rep(0,K)
inits.beta0 <- 0
inits <-
2010 Jan 19
1
Help on using WinBUGS on Mac
Dear all,
I had trouble in setting up WinBUGS on my Mac, and I'm seeking for some help
here.
I followed the instruction by Tom Palmer here:
http://www.ruudwetzels.com/MacBUGS/winbugsonmacosx.pdf
I installed Darwine 1.1.21, and downloaded WinBUGS14. However, when I
double-clicked the WinBUGS14.exe file, a black-box dialog window poped up,
and I got error message in the Wine log as
2009 Feb 17
2
How to connect R and WinBUGS/OpenBUGS/LinBUGS in Linux in Feb. 2009
Hi all,
I've managed to get JAGS working on my Ubuntu Hardy Linux with a 32-bit
computer and AMD processors using R 2.8.1. JAGS is great. I've read that
JAGS is the fastest, but that hasn't been my experience. At any rate, I
have more experience with WinBUGS under Windows and would like a version of
that working as well.
It seems like I've read a lot on the subject and tried a
2012 Jan 16
1
Saving WinBugs log file when using bugs()
Hi,
I am very new to R and Winbugs. I have been provided with a code that runs
Winbugs from R. The code runs 60 different models and I would like to
either save the Winbugs log file for each of these or reproduce the WinBugs
plots which show convergence over the iterations.I can do this by using
Debug=true and saving manually each time but obviously this is very time
consuming.
Many thanks
Ruth
2009 Jan 20
1
R and WinBUGS (via R2WinBUGS) error
Dear UseRs,
Apologies, I tried to post to the list yeasterday, but (for some
reason) part of my message got missed off. Here's a second attempt.
I am having some problems using R with WinBUGS using the R2WinBUGS
package. Specifically, when I try to run bugs() I get the following
message.
Error in FUN(X[[1L]], ...) :
.C(..): 'type' must be "real" for this format
To
2008 Aug 19
2
Calling a windows program
Greetings,
How do I make a call to a windows program from R? For example in
windows, I would run this in a shortcut:
"C:\Program Files\WinBUGS14\WinBUGS14.exe" /PAR "myownscript.odc"
Thanks,
Ben Alexander-Eitzman
[[alternative HTML version deleted]]
2005 May 16
1
A question about bugs.R: functions for running WinBUGs from R
Dear R users,
I've found bugs.R : the functions for running WinBUGs from R that is
writen by Dr. Andrew Gelman who is a professor from Columbia University.
The bugs.R would be very useful for me, and I think many of you know it
as well. I followed the instuctions on Dr. Gelman's web to install all
of documents that bugs.R needs, but when I try to run the school example
the web posted in
2008 Aug 15
1
Question on default link directory
Hi,
I have got a problem with running WinBugs from R.
Following WinBugs project recommendations for Vista Microcoft, I
installed my Winbugs software at C:\ (not at C:\Program Files).
However, when I run the attached code in R, R still looks for Winbugs
at C:\Program Files and ends up in numerous error messages.
I wonder if it is possible to direct R to C:\WinBUGS14 instead of
default link to
2005 May 25
1
The error while using R2WinBUGS
Dear all,
I tried to run WinBUGS model in R by using package R2WinBUGS, but I
failed because of the massage : cannot calculate DIC for model in log
file of WinBUGS14. In fact, the model works in WinBUGS and I can get
summaries of the model, such as density, stats..., except DIC , because
DIC may not be appropriate in this kind of model due to some
reasons(according to the manual of WinBUGS14),
2009 Dec 16
1
WinBUGS - R2WinBUGS problem
Appologies for cross-posting
Dear R users,
I am using R2WinBUGS to call WinBUGS from R. After loading data, model, and initial values I call this command
res <- bugs(data = dfile, inits = list(ifile), parameters.to.save = c("beta"), model.file = mfile, working.directory = tdir, n.thin = nthin, n.chains = 1, n.iter = niterations*nthin, n.burnin = 0, DIC = F, debug = T,
2005 Nov 09
2
About: Error in FUN(X[[1]], ...) : symbol print-name too long
Hi,
I??m trying to use the Win2BUGS package from R and I have a similar problem
that reurns with the message:
Error in FUN(X[[1]], ...) : symbol print-name too long
But, there is no stray ` character in the file ( Sugestions given by: Duncan
Temple Lang <duncan>
Date: Mon, 26 Sep 2005 07:31:08 -0700 )
The progam in R is:
library(R2WinBUGS)
library(rbugs)
dat <-