similar to: Problem using with panel.average in Lattice package

R2.2, WinXP: I am using xyplot( ) to generate time plots of plasma concentration data. The following is an edited version of my code: xyplot(log.conc ~ time| group, data = foo, groups = subject, panel = function(x, y, panel.number, ...) { panel.superpose(x, y, subscripts = TRUE, groups = foo$group, type = 'l', col

Hi All, I am trying to understand panel functions. Let's use this example. library(lattice) time<-c(rep(1:10,5)) y <-time+rnorm(50,5,2) group<-c(rep('A',30),rep('B',20)) subject<-c(rep('a',10),rep('b',10),rep('c',10),rep('d',10),rep('e',10)) myData <-data.frame(subject,group,time,y) head(myData) Plot 1 xyplot(y ~ time

Dear R gurus.. Is it possible to control span settings for different values of a grouping variable, when using xyplot? an example code shown below d=data.frame(x=rep(sample(1:5,rep=F),10),y=rnorm(50),z=rep(sample(LETTERS[1:2],rep=F),25)) xyplot(y~x,data=d,groups=z,panel=panel.superpose,panel.groups=panel.loess(span=c(2/3, 3/4,1/2)) or something like..

Hi, I'd like to plot 4 groups of data using xyplot and panel.superpose so that the points are overlayed on a single plot. For each group of data I'd also like a loess smoothed function (using panel.loess). I have tried the following: xyplot(series ~ time | gr, data=etable, panel = function(x,y, ...) { panel.superpose(x,y, ...) panel.loess(x,y,span=.15)

Hi All, I'm trying to add a 'rug' representation of my data to a plot created with densityplot(). While I can do this in the simple case, I can't do it properly when I include the "groups" argument. I have an example below. I am running a reasonably new version of R. print(sessionInfo()) R version 2.12.0 Patched (2010-11-07 r53537) Platform: i686-pc-linux-gnu

I have a number of x, y observations (Time, Conc) for a number of Subjects (with subject number Subj) and Doses. I can plot the individual points with xyplot fine: xyplot(Conc ~ Time | Subj, Groups=Dose, data=myData, panel = function(x,y) { panel.xyplot(x, y) panel.superpose(???) # Needs more here } ) I also like to plot on

Hi ilai Thank you for your suggestions. I do not know what happened yesterday I must have omitted a few changes out in going from R to email and apologies for the double posting - I had troubles sending it as my ISP gave a message of not being connected for email but was for the web I was trying to get panel.Locfit to work in a number of situations. 1. Conditioned by Farm (3 panels) with 2

The following works fine with the x11 device, though it may well be that an initial plot is overwritten. With a pdf or postscript device, I get two plots, the first of which still has the red border from having the focus, while the second is the plot that I want. library(lattice); library(grid) plt <- xyplot(uptake ~ conc, groups=Plant, data=CO2) print(plt)

Hello: I recall something like this being discuss recently, but I can't seem to locate an example in the archives. I have data like the following: df <- expand.grid(1:4, 1992:2002) names(df) <- c("MSA", "YEAR") df$IDUPREV <- runif(44) df$VALIDAT <- rnorm(44) I want to create an xyplot() with separate loess lines for each series (IDUPREV and VALIDAT) in

Dear R-help subscribers, I use xyplot to plot longitudinal data as follows: score<-runif(100,-4,5) group<-sample(1:4,100,rep=T) subject<-rep(1:25,4) age<-rep(runif(4,1,40),25) df<-data.frame(score,group,age,subject) xyplot(score~age|group, group=subject, panel=function(...){ panel.loess(...,lwd=4) panel.superpose(...)} ,data=df) this produced a plot with four panels one for each

R1.8.0, Win2k: When I run the code lset( list( background = list(col = "white"))) xyplot ( y ~ TIME , data = foo.frame, scales = list(alternating = FALSE), ylim = c(.75,y.max), panel = function(x, y, panel.number, ... ) { panel.superpose(x = foo.frame$TIME[foo.frame$group == 1], y = foo.frame$y[foo.frame$group == 1], subscripts = TRUE, groups =

Hi R community, I'm running R 2.7.2 on Windows XP SP2. I'm trying to (1) plot loess lines for each of my groupings using the same color for each group; (2) plot loess predicted values. The first part is easy: data1 <- data.frame(Names=c(rep("Jon",9),rep("Karl",9)),Measurements=c(2,4,16,25,36,49,64,81,100,1,2,5,12,17,21,45,54,67),PlotAt=c(1:9,1:9)) data2 <-

Hi, for the data below: time<-c(rep(1:10,5)) y<-time+rnorm(50,5,2) subject<-c(rep('a',10),rep('b',10),rep('c',10),rep('d',10),rep('e',10)) group<-c(rep('A',30),rep('B',20)) df<-data.frame(subject,group,time,y) I'd like to produce a plot with a single pannel with two loess curves one for each group. the code below does

my reproducible example test<-structure(list(site = structure(c(1L, 1L, 1L, 1L, 1L, 1L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 3L, 3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 5L), .Label = c("A", "B", "C", "D", "E"), class = "factor"),

Hi: In lattice, how does one handle separate graphical behavior for two different factors? In the xyplot below, the objective is to use the levels of one factor to distinguish corresponding shapes and colors, and the levels of the other factor to perform level-wise loess smooths. # Illustrative data: d <- data.frame(time = rep(1:8, each = 6), val = rnorm(48), gp1 =

Hi I have a problem with passing line and symbol parameters to user defined panel functions I had a look at the archives and created a panel function on what was shown and on panel.loess. I could not to get panel.locfit to work for what I intend it for. There is another layer to work with before success as lp() is called from locfit. xx <- structure(list(Farm = c("A",

Hi   I am using following code to produce a xyplot for some longitudinal data. There are 2 panels. It produced all longitudinal trajectories with mean profile. But since the dataset it very large plot looks very messy. I want to show, say 10 randomly selected individual longitudinal trajectories together with mean profile for entire dataset. Could any help me to alter the following code to do

Hi! Is There a way to manually create an affybatch object from qPCR array data? -- View this message in context: http://r.789695.n4.nabble.com/Creating-affybatch-objects-from-matrix-data-from-qPCR-array-tp3921559p3921559.html Sent from the R help mailing list archive at Nabble.com.

Hello, I have been struggling to do a plot in ggplot(2) that's of lattice equivalent. The following code shows the lattice plot.

Hi: Yesterday, I posted a question regarding how to handle different graphical behavior between two factors in xyplot() [package lattice]. After a public and private reply from Deepayan Sarkar, the problem has been resolved nicely, including the addition of a stacked legend for the two factors in question. The latter requires package latticeExtra. library(lattice) library(latticeExtra) # Test