similar to: axis colours

Hi, I want to format my axis in my persp3d plot. With my data, which I attached I created a persp3d plot with the following code, which I summarized from different code snippets I found: library(rugarch)library(rgl)library(fGarch)fd <-as.data.frame(modelfit,which ='density')color <-rgb(85,141,85,maxColorValue=255)x <-seq(-0.2,0.2,length=100)y <-c(1:2318)f

dev.new(width=6, height=1.5,mar=c(0,0,0,0)) par(mfrow=c(1,1),mar=c(.5, .5, 1.5, .5), oma=c(.4, 0,.5, 0)) barplot(c(1,1,1,1,1,1),col=c("blue","purple","red","green","orange","yellow"), axes = FALSE) I have a barplot that returns six colors in a line. I would like to get the same six color blocks in a hexagram layout (if it were a clock,

Dear all, I am trying to prepare some figures where I'd like the color of the plot region (i.e., the area bounded by the axes) to be different from the margin area (i.e., the area of the figure not within the axes region). I can use "bg" but that changes the background of everything? How can I accomplish what I want? Thanks, Ramon -- Ramón Díaz-Uriarte Triana 47 28016 Madrid

I'm fairly new to the silhouette functionality in the cluster package, so apologize if I'm asking something naive. If I run the 'agnes(ruspini)' example from the silhouette section of the cluster package vignette, and assign colours to clusters, two clusters have what appear to be incorrect colours in the silhouette plot. library(cluster) data(ruspini) ar<- agnes(ruspini)

I am inserting a DNA sequence into a plot, and hope to colourize each of the four nucleotide of the DNA sequence with a unique colour i.e., A ("red"), C ("green"), G ("blue", and T ("yellow"). I use the following codes, but the DNA sequence only shows as "red" DNA <- "ACGT" plot(1, xlim = c(0,1), ylim = c(0,1), axes=F,

Hi all, I have just started using RMark to analyse capture-recapture data. I am trying to analyse a simulated data set using the Robust Design (two primary periods with three secondary sessions in each) to estimate apparent survival. On specifying the time intervals (that tell R about the primary and secondary sampling sessions), this is the error I get: > time.int <- c(0,0,1,0,0) >

Hi all, If I have a huge matrix/ dataframe and I want to create a new matrix/ dataframe with every second (or third, or fourth etc.) row of the original matrix, how can I do it? Any help much appreciated. Thanks, Umesh [[alternative HTML version deleted]]

Dear List, ? I am creating a boxplot with two subsets, very similar to the example by Roger Bivand at ?boxplot (reproduced below).? I am trying to change the labels on the x-axis to have one number to cover both subsets.? I can do this in other plots by using axis=FALSE followed by a separate axis() command.? I have also tried variations in the names= argument but can't get it to work.?

Greetings, I am printing lattice plots from the R-interface to a printer, and although the y-axes of the left-most panels are visable on the screen, they are not present on the paper when there are multiple panels (ie, >1). For example: trellis.device(bg='white') histogram(~dbh, data=diameter.df) ###print to a printer from the R-interface by clicking the print button on the

I am attempting to plot frequency of occurrence against (calendar) time. As the output is to be produced as a Powerpoint picture on a dark background I wish to make the plot output yellow > par(col="yellow", col.axis="yellow", col.lab="yellow", col.main="yellow") > plot(t2, t1, ylim=c(0,40), main="Episynlestes run 2",

Hello. I am sorry for posting a (seemingly) simple question, but I have just spent 2 hours trying to find the answer, without success. I want to make a histogram with conditioning on a factor, using Trellis graphics. However, I do not want any colours (only black and white) either in the histograms or in the strip. There must be some simple argument but I can’t find it. Here is my code so

Hi thank you for talking the time to help me with this. I have a sequence of numbers in a file and an equal sequence of various character, say(a b c d) each occurs more than once. I need to plot the numbers so that numbers corresponding to a in the other sequence would have green dots, those corresponding to b a red dot, nothing on c and blue square for d. i.e 2 a show a green dot 4 b show a

Hi all, I am trying to run a glm with mixed effects. My response variable is number of seedlings emerging; my fixed effects are the tree species and distance from the tree (in two classes - near and far).; my random effect is the individual tree itself (here called Plot). The command I've used is: mod <- glmer(number ~ Species + distance + offset(area) + (1|Plot), family = poisson)

Hi: I?have installed R?first time in Linux/Fedora. I used the yum command (yum install R). The installation was successful and went without any errors. I could also run the following R script without any errors. But, the generated scatter plot only has three blue dots added through the first plot(...) statement. It does not show the main title, x-/y-axes, x-/y-labels, and also the green dots

Hi, I am trying to simulate animal movement in a gridded landscape made up of cells. At each time step (iteration), the animal moves from one cell to another in a random fashion. This is how I am simulating movement, where a and b are the x,y co-ordinates of the animal at the previous time step: for (i in 1:no.of.steps){ direction <- sample(1:8, 1) if(direction == 1){ a <- a b <- b -

Hi, I have recently begun using the lattice package, and have been using the wireframe command to visualise matrices which are model outputs. I have been trying to plot two surfaces (from two matrices) simultaneously in one panel, to visualise intersections etc., but neither my attempts or trawling the net are helping me find how to do this. Can someone help? Thanks Cheers, Umesh Srinivasan

Inspired by colouring the dots of box-whisker plots I am trying to also fill the boxes (rectangles) with different colours. This seems not to work as I expected. Looking at the help page of panel.bwplot it says: 'fill - color to fill the boxplot'. Obviously it is only intended to fill all boxes with only one colour? Nevertheless the following example shows, that 'fill' from

Hello, I want to plot 6 line graphs. I have 10 points 0.1, 0.2, 0.3, 0.4, 0.5, 0.6, 0.7, 0.8, 0.9 and 1.0. At each point say 0.1, I have 6 variables A, B, C, D, E and F. The variables all have values between 0 and 1 (and including 0 and 1). I also want to label the x axis from 0.1 to 1.0 and the y axis from 0.1 to 1.0. My goal is to plot a line graph representing the mean of the variables at each

In an R graphic, I'm using cond.col <- c("green", "yellow", "red") to represent a quantitative variable, where green means 'OK', yellow represents 'warning' and red represents 'danger'. Using these particular color names, in B/W, red is darkest and yellow is lightest. I'd like to find color designations to replace yellow and

I have a strange issue with Brother MFC-5440CN printer. When I print from Linux/CUPS, it prints colours fine. When I print from Windows, using Windows drivers (without Samba), it also prints fine. When I print from Windows through Samba/CUPS (drivers added using cupsaddsmb...), it gives me wrong colours: expected | result -------------------- yellow | blue blue | red red | green