Displaying 20 results from an estimated 300 matches similar to: "DierckxSpline fitting with different sets of y-values in one time"
2009 Jan 17
2
DierckxSpline segfault
I've just encountered a segfault when using DierckxSpline::percur
function. Below is the minimal example which triggers the error:
---
library(DierckxSpline)
x <- 1:10
y <- rep(0, 10)
pspline <- percur(x, y)
---
*** caught segfault ***
address (nil), cause 'memory not mapped'
Traceback:
1: .Fortran("percur", iopt = as.integer(iopt), m = as.integer(m),
x =
2008 May 06
2
gfortran: Command not found
Hi, All:
How do I get information about the "R CMD check / build / install"
process, especially regarding what software to install and how to
configure it under Windows XP?
I ask, because "R CMD check" complained, "gfortran: Command not
found". I found 'gfortran-sjlj.exe' in 'C:\Program
Files\R\Rtools\MinGW\bin', which is in the
2008 Jun 09
1
nonlinear fitting on many voxels
After many months, I am now banging my head against the wall because I can't find a solution to this seemingly trivial problem. Any help would be appreciated:
I am trying to apply a nonlinear fitting routine to a 3D MR image on a voxel-by-voxel basis. I've tested the routine using simulated data and things went well. As for the real data, the fitting routine
2012 May 05
1
f951.exe: sorry, unimplemented: 64-bit mode not compiled
Hello:
Under my Windows 7 system, "R CMD check
DiercxkSpline_1.1-5.tar.gz" fails because:
f951.exe: sorry, unimplemented: 64-bit mode not compiled in
make: *** [bispev.o] Error 1
gfortran -m64 -O2 -mtune=core2 -c bispev.f -o bispev.o
f951.exe: sorry, unimplemented: 64-bit mode not compiled in
make: *** [bispev.o] Error 1
ERROR: compilation failed for package
2008 Jul 17
1
smooth.spline
I like what smooth.spline does but I am unclear on the output. I can see from the documentation that there are fit.coef but I am unclear what those coeficients are applied to.With spline I understand the "noraml" coefficients applied to a cubic polynomial. But these coefficients I am not sure how to interpret. If I had a description of the algorithm maybe I could figure it out but as it
2007 Jul 24
1
Using lmer with huge amount of data
Based on the examples I've seen in using statistical analysis
packages such as lmer, it seems that people usually tabulate all the
input data into one file with the first line indicating the variable
names (or labels), and then read the file inside R. However, in my
case I can't do that because of the huge amount of imaging data.
Suppose I have a one-way within-subject ANCOVA with
2007 May 18
2
displaying intensity through opacity on an image
Dear colleagues,
I have an image which I can display in the greyscale using image. On this image, for some pixels, which I know, I want to display their activity based on a third measure. One way to do that would be to color these differently, and use an opacity measure to display the third measure. An example of what I am trying to do is at:
2013 Feb 08
1
question about reproducibility/consistency of principal component and lda directions in R
Hi everyone,
I'm not exactly sure how to ask this question most clearly, but I hope that
giving the context in which it occurs for me will help: I'm trying to
compare the brain images of two patient populations; each image is composed
of voxels (the 3D analogue of pixels), and I have two images per patient,
one reflecting grey matter concentration at each voxel, and the other
reflecting
2010 May 09
3
Plotting log-axis with the exponential base to a plot with the default logarithm base 10
Hello!
I have a problem which I have tried to solve for several days now..
I have plottet a lineplot.CI in the library "sciplot", and I am trying to
plot it with a logaritmic y-axis (with exponential base).
The problem is that; when I type "log "y"", the axis transforms into the
logaritmic of base 10.
I wonder if someeone could tell me how to specify that I would
2010 May 10
2
[Fwd: Re: Plotting log-axis with the exponential base to a plot with the default logarithm base 10]
Hello!
Thank you for answering!
What I am trying to do is to plot my raw values (biomass of different
species) on a logaritmic y-axis with the base of e. When I type "log="y"",
the axis transforms into a logaritmic axis with the base of 10.
Best regards,
Elisabeth
> Dear Elisabeth,
>
> I'm not sure if I have understood your question -- are you trying
> to
2013 Feb 18
2
continuous shading in plots
Hi, Can someone help me with the following? I currently have the following plot: plot(c(0,14,0,14),c(0,5,0,5),ann = FALSE, xaxs="i", yaxs="i",bty="L" )
polygon(c(0,18,18), c(0,6,0), col='light grey', border = NA)
polygon(c(0,18,18), c(0,2,0), col='grey', border = NA) However, I would like to make such a plot, but where there is a continuous shading
2010 May 09
1
Plotting log-axis with the exponential base to a plot wi
Hello Ted!
Thank you a lot for your reply!!!
I will try to explain again; what I want is a logarithmic scaled y-axis
with the base of e (not 10). And the values I would like to use in the
plot are the raw values (not transformed in any way). Do you still think
that the base of log does not matter in this case (wheather it is e or 10
as a base)?
Elisabeth
> On 09-May-10 18:10:27, Elisabeth
2002 Nov 26
3
Solaris 8, Can't find recent OpenSSL libcrypto
I have probably trivial problem in OpenSSH installation,
but do not see it - could you help, please ?
The libcrypto has been installed.
caroubier% ls -l /usr/local/ssl/lib/libcrypto.a
-rw-r--r-- 1 root other 2778744 Nov 19 17:53 /usr/local/ssl/lib/libcrypto.a
But the openssh stops with Can't find recent OpenSSL libcrypto.
Thank you very much in advance,
Elisabeth Porteneuve
--
2006 Apr 28
1
gauss.quad.prob
I've written a series of functions that evaluates an integral from -inf to a or b to +inf using equally spaced quadrature points along a normal distribution from -10 to +10 moving in increments of .01. These functions are working and give very good approximations, but I think they are computationally wasteful as I am evaluating the function at *many* points.
Instead, I would prefer to use
2009 Jun 25
3
xen-create-image: command not found?
Hello,
after I fixed one problem, the next one raised up. I am trying to create a guest domain. I specified the configurations in /etc/xen-tools/xen-tools.conf and I ran
$sudo xen-create-image --hostname=virtualrouter1 --role=udev
the output is: sudo: xen-create-image: command not found
I searched all directories for a file with this name but couldn''t find any. Is this possible? I am
2008 Aug 14
0
3D constrained nonlinear least squares fit
Hi,
I am new to R, and am trying to solve the following optimization problem:
This is a nonlinear least squares problem. I have a set of 3D voxels. All I
need is to find a least squares fit to this data. The data model actually
represent a cube-like structure, consisting of seven straight lines. The
lines have some intersections (and at this intersection both of the
participating lines end).
2006 Nov 07
1
multivariate splines
Hi,
I am looking for an R package that would calculate multivarite (mostly
2d and 3d, tensor) cubic interpolating splines, so that I could
evaluate these splines (and their derivatives) at many points (unkown
at the time of calculating the spline polynomials) repeatedly.
To make things concrete, I have an array V with
dim(V) = k
and gridpoint vectors grid=list(...), length(grid[[i]])==k[i],
2002 Mar 14
2
occassionally : no domain controller available
I'm using samba 2.2.3a as fileserver and domaincontroller for 12
NT4-clients (sp6a) and occassionally - when a user tries to logon -
there comes the following messages on the nt-client:
-
No Windows NT Domain Controller is available for domain XXXX. There are
currently no logonservers available to service the logonrequest.
-
and
-
server-side profile not available. The OS tries to log you on
2008 May 01
1
Optimal knot locations for splines
Suppose I have two variables, x and y. For a fixed number of knots, I want
to create a spline transformation of x such that a loss function is
minimized. Presumably, this loss function would be least squares, i.e. sum
(f(x)-y)^2. The spline transformations would be linear, quadratic or
cubic. I know I can solve this problem using some optimization function in
R, but I was wondering if anyone
2009 Sep 27
3
CRAN (and crantastic) updates this week
CRAN (and crantastic) updates this week
New packages
------------
* bdoc (1.0)
Michael Anderson
http://crantastic.org/packages/bdoc
This package contains a function that will classify DNA barcodes as
well as a few test and reference data sets.
* bdsmatrix (1.0)
Terry Therneau
http://crantastic.org/packages/bdsmatrix
This is a special case of sparse matrices, used by coxme and