similar to: Vector of Vectors

Is there any R package that implements a bifurcating autoregression, aka the BAR(n) model? I've been reading the Huggins and Staudte paper, "Variance Components Models for Dependent Cell Populations", from the Journal of the American Statistical Association, 1994. Shawn Garbett <shawn.p.garbett at vanderbilt.edu> Vanderbilt Cancer Biology 220 Pierce Ave, PRB 715AA

Hi all, thanks for your help in advance. I was running some scripts and suddenly R began taking a very long time to process mundane errors, which I often generate since I am new to R...such as forgetting to add in my quote getOption(warn) Error in options(x) : object 'warn' not found Not only does the warning message print in the R console when it finally writes the error, but it also

Hi, I'm no longer on the subscribing list, but was hoping to get my question posted.? Please inform if this is ok, although I am guessing you wont post with the image below.? If so, let me know and I will resend without the image. Thanks Hi, I just upgraded my system and my version of R all at once.? Upon running old code for heatmaps etc, I suddenly notice that there is an odd grid pattern

Hey, thanks for the input! I am looking into that. It is however a bit complicated due to the authentication lines and share connect lines being only related due to proximity in the log. It would probably work for most of the instances, but it would not be 100% viable, meaning we would be getting compaints and questions from our user "I ain't got that share?! WTF!!" I was going to

Hello I tried to define replacement functions for the class "mylist". When I test them in an active R session, they work -- however, when I put them into a package, they don't. Why and how to fix? make_my_list <- function( x, y ) { return(structure(list(x, y, class="mylist"))) } mylist <- make_my_list(1:4, letters[3:7]) mylist mylist[['x']] <- 4:6

Hi I have a list : mylist <- list( a = NULL, b = 1, c = 2 ) > mylist[1] $a NULL > is.null(mylist[1]) [1] FALSE > is.null(mylist$a) [1] TRUE why? I need to use mylist[1]

I can define a list containing NULL elements: > myList <- list("aaa",NULL,TRUE) > names(myList) <- c("first","second","third") > myList $first [1] "aaa" $second NULL $third [1] TRUE > length(myList) [1] 3 However, if I assign NULL to any of the list element then such element is deleted from the list: > myList$second <-

Hi r-users, I have a matrix B and a list of 3x3 matrices (mylist). I want to calculate the quantiles in the list using each of the value of B as probabilities. The codes I wrote are: B <- matrix (runif(12, 0, 1), 3, 4) mylist <- lapply(mylist, function(x) {matrix (rnorm(9), 3, 3)}) for (i in 1:length(B)) { quant <- lapply (mylist, quantile, probs=B[i]) } But quant

Dear all, I think that my question is very simple but I failed to solve it. I have a list which elements are matrices like this: >mylist [[1]] [,1] [,2] [,3] [1,] 1 3 5 [2,] 2 4 6 [[2]] [,1] [,2] [,3] [1,] 7 9 11 [2,] 8 10 12 I'd like to create a matrix M<-mylist[[1]]+mylist[[2]] [,1] [,2] [,3] [1,] 8 12 16 [2,] 10 14 18

How do I parse an identifier of a list component, e.g. mylist$mycomponent or mylist[[1]] ? Parse does not do the job, e.g. parse(text="mylist$mycomponent") returns an expression with just one term, instead of "mylist", "$", "mycomponent". What I need is a way to extract the list name (e.g. "mylist"), given an identifier of a component.

I've been doing some consulting with students who seem to come to R from SAS. They are usually pre-occupied with do loops and it is tough to persuade them to trust R lists rather than keeping 100s of named matrices floating around. Often it happens that there is a list with lots of matrices or data frames in it and we need to "stack those together". I thought it would be a simple

Hi, I'm have a list of integer vectors and I want to perform an outer() like operation on the list. As an example, take the following list: mylist <- list(1:5,3:9,8:12) A simple example of the kind of thing I want to do is to find the sum of the shared numbers between each vector to give a result like: result <- array(c(15,12,0,12,42,17,0,17,50), dim=c(3,3)) Two for() loops is the

Here i have a variable MyVar <- data.frame(read.csv("D:\\Doc.csv")) And now i am storing this variable name into a list. MyList <- list() MyList [length(MyList )+1]<- "MyVar" Now what is the requirement is, i need to call the variable name "MyVar" from the list "MyList " and get the data.

Hi, I 'd like to match each member of a list to a target string, e.g. ------------------------------ mylist=c("MN","NY","FL") g=regexpr(mylist[1], "Those from MN:") if (g>0) { "On list" } ------------------------------ My question is: How to add an end-of-string symbol '$' to the to-match string? so that 'M' won't

I have a list that is made of lists of varying length. I wish to create a new vector that contains the last element of each list. So far I have used sapply to determine the length of each list, but I'm stymied at the part where I index the list to make a new vector containing only the last item of each list mylist =

Hi, I'm pretty new to R. I have an object (say a list) and I I have a function that I call on various columns in that list (excuse terminology if it's wrong/ambiguous). Imagine its like this (actual values are unimportant) and called mylist: >mylist A B 1 5 2 5 3 6 4 8 5 0 I have a function: foo = function(param){ #modify list A or B values depending on

I have this awkward problem with trellis (lattice). I am trying to generate some plots through loops but the .eps file is empty. When I generate them in a list and print them outside the loop all is fine. this is an example below:( nothing shows up in foo.eps, but all show up in foo1.eps) R vesion 2.0.1, lattice version 0.10-16, on a debian 2.6.8-1 kernel. X <- data.frame(x=rnorm(10000),

Hi, I have a dataframe (say myData) and want to get a list (say myList) that contains a matrix for each row of the dataframe myData. These matrices are calculated based on the corresponding row of myData. Using a for()-loop to do this is very slow. Thus, I tried to use apply(). However, afaik apply() does only return a list if the matrices have different dimensions, while my matrices have

Dear R users, Let's say I have a list with components being 'm' matrices (as exemplified in the "mylist" object below). Now, I'd like to subset this list based on an index vector, which will partition each matrix 'm' in 2 sub-matrices. My questions are: 1. Is there an elegant way to have the results shown in mylist2 for an arbitrary number of matrices in mylist?

Hi all, I would like to iterate through a list with named elements and access the names within an lapply / sapply call. One way to do this is iterate through the names and index the list with the name. Is there a way to iterate through the list elements themselves and access the element names within in the function? For example, mylist <-