similar to: write.matrix.csr(e1071) bug

Hello, I would like to read and write sparse matrices using the functions write.matrix.csr() and read.matrix.csr() of the package e1071. Writing is OK but reading back the matrix fails: x <- rnorm(100) m <- matrix(x, 10) m[m < 0.5] <- 0 m.csr <- as.matrix.csr(m) write.matrix.csr(m, "sparse.dat") read.matrix("sparse.dat") Error in initialize(value, ...)

Dear all, I'm training an SVM with default settings on a matrix csr (SparseM package). I realized that if I train the SVM with the (hopefully) equivalent matrix (Matrix package) representation, the returned models and predictions sometimes differ. I expected both representations of the same data to lead to the same results though. It could be that it is a scaling problem, because unscaled

Hello all, I am trying to use the "svm" method provided by e1071 (Version: 1.5-16) together with a matrix provided by the SparseM package (Version: 0.73) but it fails with this message: > model <- svm(lm, lv, scale = TRUE, type = 'C-classification', kernel = 'linear') Error in t.default(x) : argument is not a matrix although lm was created before with

Full_Name: Julien Gagneur Version: 2.2.1 OS: Linux (Suse 9.3) Submission from: (NULL) (194.94.44.4) Using the SparseM library (SparseM_0.66) and the e1071 library (e1071_1.5-12) I fail using svm method with a sparse matrix. Here is a sample example. I experienced the same problem under Windows. > library(SparseM) [1] "SparseM library loaded" > library("e1071")

I would like to add a class to the SparseM package. I have a class "matrix.csr" that describes a matrix in compressed sparse row format, now I would like a class matrix.diag.csr that describes such objects when they happen to be diagonal. The idea is that matrix.diag.csr objects should behave (later in life) exactly like matrix.csr objects, the distinction is only needed in order to

I'm trying to resolve a small problem that has arisen from introducing a NAMESPACE for the package SparseM. Prior to the namespace I had a class "matrix.diag.csr" that consisted of diagonal sparse matrices. It was defined to have the same attributes as the matrix.csr class and setAs was used to define how to coerce integers and vectors into this form:

Hello List, I am having a great trouble using svm function in e1071 package. I have 4gb of data that i want to use to train svm. I am using Amazon cloud, my Amazon Machine Image(AMI) has 34.2 GB of memory. my R process was killed several times when i tried to use 4GB of data for svm. Now I am using a subset of that data and it is only 1.4 GB. i remove all unnecessary objects before calling

all of a sudden, after a SparseM upgrade(?) I get this error: > str(z) Formal class 'matrix.csr' [package "SparseM"] with 4 slots ..@ ra : num [1:85372672] -0.4288 0.0397 0.0104 -0.1843 -0.1203 ... ..@ ja : int [1:85372672] 1 2 3 4 5 6 7 8 9 10 ... ..@ ia : int [1:699777] 1 123 245 367 489 611 733 855 977 1099 ... ..@ dimension: int [1:2] 699776 122

Eric Christopher wrote: > On Wed, Jul 9, 2014 at 11:39 AM, Jonathan Roelofs > <jonathan at codesourcery.com> wrote: >> >> On 7/9/14, 12:33 PM, Eric Christopher wrote: >>> Any reason why you deleted code that isn't related? >>> >>> -eric >>> >>>> - enum SubArchType { >>>> - NoSubArch, >>>> -

Dear R-Users, I have problems with the cobs library. When doing the cobs example, I get the folling error message: example(cobs) cobs> x <- seq(-1, 3, , 150) cobs> y <- (f.true <- pnorm(2 * x)) + rnorm(150)/10 cobs> con <- rbind(c(1, min(x), 0), c(-1, max(x), 1), c(0, 0, 0.5)) cobs> Rbs <- cobs(x, y, constraint = "increase", pointwise = con)

When compiling C code below for AArach64, I saw that shrink-wrapping didn't happen due to the very early uses of CSRs in the entry block. So CSR spills/reloads are executed even when the early exit block is taken. int getI(int i); int foo(int *P, int i) { if (i>0) return P[i]; i = getI(i); return P[i]; } It's not that hard to find such cases where

On 2017-10-27 19:50, Hal Finkel wrote: > On 10/27/2017 03:32 PM, Jun Lim via llvm-dev wrote: > >> When compiling C code below for AArach64, I saw that shrink-wrapping >> didn't happen due to the very early uses of CSRs in the entry block. >> So CSR spills/reloads are executed even when the early exit block is >> taken. >> >> int getI(int i); >>

When a sparse matrix is multiplied by a regular one, the result is usually not sparse. However, when matrix.csr is multiplied by a regular matrix in R, a matrix.csr is produced. Is there a way to avoid this? Thanks! -- Sam Steingold (http://sds.podval.org/) on Ubuntu 12.04 (precise) X 11.0.11103000 http://www.childpsy.net/ http://palestinefacts.org http://truepeace.org

After upgrading to 1.7.0 under debian linux, I can't get e1071 working properly. The first problem I had was that g++-3.0 was the standard compiler but wasn't installed, so I installed it. e1071 then installed correctly, but I get the following: aperrin at perrin:~/afshome/papers/authoritarian/R$ R R : Copyright 2003, The R Development Core Team Version 1.7.0 (2003-04-16) R is free

Thibault, It would be nice if LiblineaR() accepted data in the form of a sparse matrix (it does not accept whatever e1071::read.matrix.csr returns). It would also be nice if there were functions to read/write files in the native liblinear file format; I am sure the original liblinear library provides at least the input code. Thanks! -- Sam Steingold (http://sds.podval.org/) on Ubuntu 12.04

Hello LLVMdev!! Yesterday I posted a patch request to the llvm-commits list requesting that someone could apply a patch to Triple.h and Triple.cpp for me. I didn't get any response so I wondered whether I should have posted to this list instead. My story is as follows: we are trying to get lldb/llvm support for CSRs range of Kalimba DSPs. Eventually we are planning to hire someone to

Hi! After unziping the CRAN file e1071.zip on my Win95 library directory, I start R and type >library(e1071) After that, help commands of the e1071 functions work (i.e., help(read.pnm), BUT some functions themselves are not available: > read.pnm Error: Object "read.pnm" not found I've looked at the file library/R/e1071 with an ascii editor and it seems like the functions

On 2017-10-30 21:20, Hal Finkel wrote: > On 10/30/2017 12:20 PM, junbuml at codeaurora.org wrote: >> On 2017-10-27 19:50, Hal Finkel wrote: >>> On 10/27/2017 03:32 PM, Jun Lim via llvm-dev wrote: >>> >>>> When compiling C code below for AArach64, I saw that shrink-wrapping >>>> didn't happen due to the very early uses of CSRs in the entry

On 2017-11-10 07:47, Nemanja Ivanovic wrote: > One thing I thought about doing a while back and never really wrote a > POC for is the following: > - Make FirstCSRCost a property of the MachineBasicBlock (or create a > map of MBB* -> FirstCSRCost) > > - Implement a pre-RA pass that will populate the map as follows: > > - Identify all blocks with calls > > -

** save image Error in loadNamespace(i[[1]], c(lib.loc, .libPaths()), keep.source) : There is no package called 'class' Using 30 May 2004 developer version of R-1.9.0 trying URL `http://cran.r-project.org/src/contrib/e1071_1.4-0.tar.gz' Content type `application/x-tar' length 325388 bytes opened URL .......... .......... .......... .......... .......... ..........