similar to: Multi matrix row-wise mapply?

In an earlier post, a person wanted to divide each of the rows of rawdata by the row vector sens so he did below but didn't like it and asked if there was a better solution. rawdata <- data.frame(rbind(c(1,2,2), c(4,5,6))) sens <- c(2,4,6) temp <- t(rawdata)/sens temp <- t(temp) print(temp) Gabor sent three other solutions and I understood 2 of them but not the

I am wondering if people on the list could recommend books that they have found helpful about programming concepts and style? I often find that students write R programs by copying existing code but could really benefit from the understanding of more general programming ideas. An example would be to avoid writing functions which attempt to modify their parameters. Another principle would be

Hello group! Is there a package that allows to fit smooth *periodic* splines to data? I'm interested in a function which combines the functionality of smooth.spline and splines::periodicSpline. Thanks, Andrey

Hi, Given a simple example, test <- matrix(c(0.1, 0.2, 0.1, 0.2, 0.1, 0.1, 0.3, 0.1, 0.1), 3, 3) How to generate row indexes for which their corresponding row values are less than or equal to 0.2 ? For this example, row 2 and 3 are the correct ones. Thanks [[alternative HTML version deleted]]

I use R 2.7.0 on GNU/Linux. I have noticed a problem in cbind method for multivariate time series (ts) objects. Consider the following example: > t <- ts(data.frame(a = 10:20, b = 20:30, c = 30:40, d = 40:50)) > t1 <- t[, c('a', 'b')] > t2 <- t[, c('c', 'd')] > > colnames(t1) [1] "a" "b" > colnames(t2) [1]

Hello R Help Team, I have created graph from weighted adjecency matrix .Is there a way I can find highly connected nodes in Igraph like the Package RBGL does. nathan -- View this message in context: http://www.nabble.com/Highly-Connected-Nodes-in-Igraph-tp22377522p22377522.html Sent from the R help mailing list archive at Nabble.com.

Dear colleagues, I'm trying to have a look at the Assortative and Disassortative ( http://en.wikipedia.org/wiki/Assortative_mixing) of the network I have. But it seems that the igraph hasn't mentioned that yet. I have to get the in/out degree of the vertices of each edge and calculate the Pearson's Correlation coefficient which seems to be quite a huge task for me. :( So I wonder if

Dear List, i know there are some solutions for this in the archive, but they're not very good for numeric matrices, since they usually convert rows/columns to character strings. Is there an easy way to do $subject for numeric matrices properly, or i need to do it by hand? Thanks, Gabor

I'm trying to draw an arrow with a curved shaft on the graph as a straight one looks messy on a detailed graph. I've looked in arrows but it doesn't seem to give an option. larrows doesn't look much more promising. I had a look in the archive and couldn't find anything. Any thoughts? Thanks Paul -- View this message in context:

Hello I am a relatively new user of R and am struggling to use the 'network' package. I have a correlation matrix (produced using 'cor'), and want to draw a network where each item showing correlation above a threshold (say 0.5) is joined by a green line, and each item showing correlation below a threshold (say -0.5) is joined by a red line. Does anyone have any hints of how to

Dear all, "Writing R Extensions" explicitly says that A method must have all the arguments of the generic, including ... if the generic does. A method must have arguments in exactly the same order as the generic. If the generic specifies defaults, all methods should use the same defaults. This is clear. R CMD check even checks for this. But then how is it possible that

Hi all, I'm very new to R and read a few tutorials, however I'm having difficulty trying to figure out how to plot a minimum spanning tree. I have a csv file that contains an n-by-n matrix of distances between strains of bacteria called matrix.csv. Looks like: id,strain1, strain2,strain3 strain1,0,.2,.8 strain2,.3,0,.7 strain3,.4,.6,0 I've been messing around with some information

Hi fellow R-users, I have run into a problem when trying to identify the number of rows in a matrix. Say we have an arbitrary 5 by 5 matrix called temp: temp <- matrix(norm(25), nrow=5) The problem is that nrow(temp[1,]) returns NULL. I would like it to return 1 because in my larger program I am indexing the rows of large matrices according to another variable and I need to test when the

useR's, Consider: y <- c(20, 25, 30) > m <- matrix(c(0.0,1,NA,0.5,1.25,0.75, 0.5, NA, > NA),byrow=TRUE,nrow=3,ncol=3) > m [,1] [,2] [,3] [1,] 0.0 1.00 NA [2,] 0.5 1.25 0.75 [3,] 0.5 NA NA For each numeric value, I want to replace them with their corresponding y-value. The result should look like (here, each row represents a variable rather than the columns):

Dear All, I would like to do run R without having write permissions to any directory on the system. It seems that I need to modify the R source code for this, to make R start without creating a temporary directory. So far, so good. But should I expect any more complications? Does R really need the temporary directory that much? Thanks, Gabor -- Gabor Csardi <Gabor.Csardi at unil.ch>

Hallo, I am running R-2.6. on Windows. I have a code which uses library(convert). Can anyone tell me which package I need to install to run this code. Everytime I receive the error message library (convert) not found. Thanks, Corinna

Greetings, R-ians: I would like to know which version or R was used to create a given package. I think I remember seeing that topic discussed recently but cannot find it among my notes. Can anyone tell me how to determine which version of R created a package? Thanks. Charles Annis, P.E. <mailto:Charles.Annis@StatisticalEngineering.com> Charles.Annis@StatisticalEngineering.com

Dear Luke and others, I have many R versions on my machine and want to start a particular one when snow builds its cluster. (The same version I start snow from.) It seems that everything is set up correctly in defaultClusterOptions: > mget(ls(defaultClusterOptions), defaultClusterOptions) $homogeneous [1] TRUE $manual [1] FALSE $master nodename "maya.unil.ch" $outfile [1]

Dear everybody! I am making a graph in R and employ pstoedit to expot the .pdf-output to .svg. When I open the .svg with firefox I get the .svg-code shown wit the following header: "Mit dieser XML-Datei sind anscheinend keine Style-Informationen verkn?pft. Nachfolgend wird die Baum-Ansicht des Dokuments angezeigt." Which information should how be included? Thank you in advance. Yours,

Hello! I use R 2.8.1 under Debian GNU/Linux. I've run into a problem including R pdf figures into LaTeX document. To reproduce: 1) Execute the following minimal R script: pdf('fig.pdf', family = 'URWTimes', width = 5, height = 5) plot(rnorm(10), main = '????', xlab = '????????', ylab = '????????') dev.off() embedFonts('fig.pdf') 2) Open