similar to: Problems with R memory usage on Linux

Displaying 20 results from an estimated 5000 matches similar to: "Problems with R memory usage on Linux"

2008 Feb 05
2
using image to show RGB image data ?
Hello all, I'm now using image() to show image data (in my case dumps of SOM weights) but would like to show RGB colour data, not just single "z" colour values. I've currently been using seq() to skip 4 values, so I can show the R, G or B channels separately as "z". But is there a way I can show all three channels simultaneously as a proper colour image? Thanks, B.
2008 Jan 11
2
How to calculate the mean of all values in a list or dataframe
Hello all, I've scoured the archives and google and I can't figure out how to amalgamate a set of vectors of differing lengths in such a way as I can calculate the mean easily. The following dummy example contains vectors of length 1, but my data has vectors of various lengths. R> test = list(); for(i in 1:5) {test = append(test, i)} R> test [[1]] [1] 1 [[2]] [1] 2 [[3]] [1] 3
2007 Oct 22
3
How to format data for time-series analysis
Hello all, I'm using R to visualize and explore the data produced by a software system. The software generates logs for many types of events. The software runs for days on end, and can possibly generate multiple events per second. What is the appropriate time format for year, month, day, hour, minute, second, millisecond? that R can properly interpret (using zoo? or ITS?) I'll have
2007 Nov 05
2
its does not recognize POSIXct w/ both time and Date?
Hello all, I'm getting much further with my time-series work, but still getting into some problems. I'm using POSIXct time format with both date and time. I'd like to use that in an its object but It seems its only processes the date part of the POSIX time stamps: BMU_its_data <- its(data[BMUindex,2-4],dates=data[BMUindex,1]) Error in `row.names<-.data.frame`(`*tmp*`,
2008 Feb 21
2
jpeg() creating empty files with qplot() in a loop
Hello all, I'm stuck with a strange issue with writing jpegs of plots to a folder in a loop. This works: for (step in 1:length(steps)) { jpeg(filename=paste("frame_",sprintf("%05d",step),".jpg",sep="")) plot(steps[[step]]) dev.off() } But if I use qplot to generate the plot (which is my aim): for (step in 1:length(steps)) {
2008 May 12
1
Converting qqplot2 qplot() to grammar?
Hello all, I've been using the following qplot command: qplot(pixX,pixY, data=som, geom="tile", fill=rgb) + scale_fill_identity() + opts(aspect.ratio = .75) + facet_grid(unitX ~ unitY) Now I would like to convert it into the explicit ggplot grammar, so I can remove the extras: axes, labels, background, borders, facet labels, and extra white-space around the plot. (If anyone has
2005 Dec 05
1
unified meta-data handling ogg/theora/vorbis
Hey all, I'm working on a media-database art project that basically stores a bunch of sound and video files, which are then navigated based on meta-data. I'm not sure where to start asking these, questions, here seemed like a good start. So I was thinking I should use an open format, like ogg/vorbis/theora. I also thought, will all that coll meta-data stuff in ogg I should be able to
2003 Mar 10
10
[Bug 83] PAM limits applied incorrectly (pam_session being called as non-root)
http://bugzilla.mindrot.org/show_bug.cgi?id=83 ------- Additional Comments From djm at mindrot.org 2003-03-10 15:49 ------- Created an attachment (id=247) --> (http://bugzilla.mindrot.org/attachment.cgi?id=247&action=view) Call pam_session after child fork() Hopefully this patch will allow people to gather the feedback necessary to close this bug. ------- You are receiving this
2007 Nov 02
1
R timeDate does not allow seconds?
Hello, Sorry if anyone gets this message twice, as my mailserver may not be working. Thanks for your response. Your idea makes a lot of sense to me, but I've been unable to get seconds to work. I ended up with this format finally: "2007-10-31_16:20:22" Problem is I am unable to get it recognized as a date using timeDate(): R>
2000 Oct 21
2
scp and regstarting transfer
Hi, I have one question. Is someone working on restarting transfers ability in scp ? This will be nice feature especially when you want to download huge file and you will lost connection (at 90%, 600MB file as I had) :-( -- Arkadiusz Mi?kiewicz http://www.misiek.eu.org/ipv6/ PLD GNU/Linux [IPv6 enabled] http://www.pld.org.pl/
2008 Nov 08
2
Differential backup
Hello, I have got three folders: - /home/backup/2008-10-20 - place for differential backup - /mnt/for_backup - folder with files for backup - /home/backup/2008-10-01 - place where the last full backup is My question: is below command prepared correctly to make differential backup? rsync -avPbn --backup-dir=/home/backup/2008-10-20/ --exclude "System Volume Information" --exclude
2001 Apr 24
1
config file
Hello It's possible that the public parameter "config file" in the new Samba Version 2.2.0 did not work? (config file = /usr/local/samba/lib/smb.conf.%G) %G is "nobody" if I don't restart the Client. And if I restart the computer it's the primary group of the user. I try it with a Win98 Client and Samba is running under SuSE Linux 7.1. Do you have any Idea what can
2008 May 31
0
Advice for working with Sammon's Projection on image data
Hello all, I'm working on a project that uses a SOM to generate feature maps from image data. Each image is a 100x75 pixels and RGBA, so 30,000 elements per image. I wanted to observe the structure of the pixel by pixel euclidean distance (where each image is a point in 30,000 dimensional space) of my image data. Sammon's projection seems appropriate for this, though I'm a bit
2010 Dec 21
0
rsync: on remote machine: --time-limit=4: unknown option
Hello, I compiled rsync with the time-limit patch on my machine. But when I try to archive to a remote server I get the following error: rsync: on remote machine: --time-limit=4: unknown option Is there a way to use the time limit patch if the server doesn't support it. I would like rsync to just quit after specified amount of time and continue where it left off the next day. Thank you
2016 Feb 22
0
N6600 and colour saturation
Hello all, I have an older machine with an AGP GeForce N6600 Nvidia card. I recently bought a new colour calibrated monitor to replace an old CRT and I've since noticed a stark difference in the colour produced by the N6600 and my newer machines with series 5 and 7 graphics cards. The newer cards show similar B+W contrast, but colour is much less saturated on the N6600. I had been
2002 Jun 26
1
[Bug 301] In openssh 3.3 and 3.4 pam session seems be called from non-root
http://bugzilla.mindrot.org/show_bug.cgi?id=301 ------- Additional Comments From ldv at altlinux.org 2002-06-27 03:09 ------- In your case, to make pam_limits work, use "ulimit -Sc 0" instead of "ulimit -c 0". ------- You are receiving this mail because: ------- You are the assignee for the bug, or are watching the assignee.
2002 Jun 30
2
Password auth problem with openssh 3.4 and Linux 2.2.20
After upgrading to openssh-3.4p1, password authentication is no longer working on my system. I'm running Linux RedHat 6.2 with: kernel 2.2.20 openssh-3.4p1 openssl-0.9.6 pam-0.72-6 pwdb-0.61-0 I've tried it with and without compression, with and without priv sep, and I always get errors like this: Jun 30 19:07:48 sugarfreejazz sshd[1344]: Failed password for randy from 10.10.10.2 port
2010 Sep 28
2
logwatch question
Hello A few weeks ago I started having problems with my system email or specifically my logwatch reports showing up in my inbox. I got most of those issues figued out except one now when i get an email from my system it has a title of this Cron <root at localhost> run-parts /etc/cron.daily with this message /etc/cron.daily/0logwatch: Recipient names must be specified I have my
2008 Oct 15
2
R: "in-place" appending to a matrix.
Hello fellow R sufferers, Is there a way to perform an appending operation in place? Currently, the way my pseudo-code goes is like this for (i in 1:1000) { if (some condition) { newRow <- myFunction(myArguments) X <- rbind(X, newRow) # <- this is the bottleneck!! } } As you can see, it works but as the matrix X gets the size of a few million rows, the
2009 Jan 16
1
Invalid or corrupt kernel image (pxelinux 3.72, kernel 2.6.28)
I'm trying to boot nfs-root kernel using pxe. Kernel version is 2.6.28, image size - 2.3MB. tftp server works fine. The curious part: if I type the kernel image name at "boot:" prompt, exactly as it appears on the "Loading" line, everything works as expected. Does anybody have any ideas what it could be? By the way, gpxelinux exhibits the same behavior.