similar to: ggplot2: sub/super-script axes labels

The graphic design elements in ggplot2 are so well done for color graphics. Thank you! For BW publication graphs, there are a few options I would like to be able to tweak, but can't seem to find the grob handles necessary OR the right plotting strategy. Here's one problem I've been puzzling over: Q> How do you plot points with a grey fill and a black outline around the

Hi- A journal has asked me to make all of my text annotations on a figure at 10-point size. For the most part this is easy, e.g. by creating figures with: pdf(..., family='Times', pointsize=10) But where I have superscripts (or subscripts) in axis labels, the default seems to be to shrink the superscripted text slightly. For example this code:

Dear help, suppose I have this array and want to compute sd aross rows and columns. p <- array(c(1:5, rep(NA, times = 3)), dim = c(5, 5, 3)) apply(p, 1:2, sd) fails because sd requires at least 2 numbers to compute sd apply(p, 1:2, sd, na.rm = TRUE) fails for the same reason I crafted my own function that does what I want sd_fun <- function(i){ if(sum(!is.na(i))==0){ temp.sd <- NA

Dear R Community, I am trying to optimize a water quality model that I am using. Based on conversations with others more familiar with what I am doing I plan to implement DEOptim to do this. The water quality model is interfaced through a GUI. I have the input file necessary to alter parameters and run the model as a text file. To do the optimization I have figured out the general procedure

Hi all, I'm trying to write an axis label that sounds P( X | K and Xb ) (probability of X given K and Xb ) but I need the intersection symbol (the "\cap" in latex) Actually I did'nt find any "cap" symbol in plotmath, the only one is intersect(A[i],i==1,n) but is not my case because subscripts and arguments are mandatory. Anyone knows how to do? Thanks Andrea --

I'm running an ANOVA on some data for respiration in a forest. I am having a problem with my degrees of freedom. For one of my variables I get one fewer degrees of freedom than I should. I have 12 plots and I therefore expected 11 degrees of freedom, but instead I got 10. Any ideas? I have some code and output below: > class(Combined.Plot) [1] "character" >

After checking the usual archives (Baron search engine) I came up nothing. It appears that ylab=expression() doesn't work in lattice? How do I put superscripts in ylab? Many Thanks, Hank Martin Henry H. Stevens, Assistant Professor 338 Pearson Hall Botany Department Miami University Oxford, OH 45056 Office: (513) 529-4206 Lab: (513) 529-4262 FAX: (513) 529-4243

Hello, Recently, I have asked for a help with building graphs, and I got few great advices. Now, my appetite is growing :) and I wander how to add legend for two (or more) lines in following example: matplot(DAT[, c(3,4)], type="b", ylim=c(0,8), xaxt="n", yaxt="n", + pch=c(21,22), col="black", lty=c("dashed","solid"), xlab="",

Although I see similar, but more complex, questions addressed in the help archive, I'm having trouble adding superscripted text to the y-axis labels of some figures, and I can't find anything in the R documentation on this. I have: ylab="BA (m2/ha)" but I want the "2" to be superscripted. Thanks in advence for the help, or for pointing out the appropriate help file.

We are trying to build a human respiration model. Preliminary analysis of some breathing signals has shown that humans breathe through switching among a finite number of patterns. Hidden Markov seems to be the right approach. Since most of our code is written in R scripting language, finding an R package implementing an HMM that we can use for our prototype would be very helpful. I have been

Hello R users, When trying to fit a nonlinear mixed model to a respiration time series, I get the following error message: Error in recalc.varFunc(object[[i]], conLin) : dims [product 30] do not match the length of object [34] In addition: Warning message: In conLin$Xy * varWeights(object) : longer object length is not a multiple of shorter object length Below is an example that generates

Hello , I'm new to R and don't really understand how to use the function "apply" instead of a "for loop", particularly for a function with multiple entries. I have a big data file and would like to apply a function in multi thread to accelerate the processus. I have a data frame containing values of* CO2 in ppm (resp[i,6])* that I want to convert in umol of CO2

#I would like to interpolate a straight line between 06/08/06 04:16:00 - 06/08/06 20:31:00 with values and then sum them. This is an estimate of ecosystem #respiration and I will be using this in a larger context(48 days of these diurnal curves), but for right now I am just trying to figure out how to do it for this one #day example. I have some other code for Ecosystem (stream) Metabolism that

R-helpers; I tried to get a superscripted 3 in the following xyplot example but failed: >data(whiteside) >xyplot(Gas ~ Temp | Insul, whiteside, panel = function(x, y, ...) { panel.xyplot(x, y, ...) panel.lmline(x, y, ...) }, xlab = "Average external temperature (deg. C)", ylab = paste(paste("Gas consumption (1000", expression(ft^3),")"), aspect

odfWeave is throwing up a cryptic error, after successfully processing a file with a large number of figures (~30) and many \Sexpr{} calls. The error is (at least to me) cryptic. I am not sure where to look to correct this problem. Here's the error: Post-processing the contents Error in .Call("RS_XML_Parse", file, handlers, endElementHandlers, as.logical(addContext), :

Dear all I am doing some plots in R. I want to have as label in y-axis Temperature (oC). I have used ylab=expression(paste({Temperature} ^o*C)) but what I get is TemperatureoC. How can I have a space between Temperature and the units and also the units to be in brackets? Many thanks Maria [[alternative HTML version deleted]]

Dear R-users Thanks to Jose Pinheiro, Douglas Bates and coworkes for providing R with the nlme package. Could someone help me, please, to specify a correct random formula for a mixed model, that specifies no random effect on a higher level? I have the following dataset of timeseries of respiration measurements (column resp) of biomass including a parameter initial biomass x0. Respiration

I am trying to plot fitted lme values as a smooth line of a graph showing the exponential relationship between temperature and soil respiration. In the plot, the x-axis has temperature, and the y-axis has soil respiration. When I try to add a line showing temperature versus the fitted values, it is jagged and not smooth. Here is the code I used: lme.1<-lme(fixed=LnFlux~Temp,

hello, i need to add legend text: "4th-root transformation", with the "th" superscripted - tried much - but nothing worked.. thanks for any hints, kay ----- ------------------------ Kay Cichini Postgraduate student Institute of Botany Univ. of Innsbruck ------------------------ -- View this message in context:

hi all - i've seen versions of this question before, but none seem to get directly at my solving my (probably very simple) issue: i simply want to annotate the tick marks on an axis with (superscripted) 10^x notation, and tried this: axis(1, at = axTicks(1), as.expression(substitute(10^foo, list(foo = axTicks(1)))) thinking the as.expression/substitute would create the appropriate