Displaying 20 results from an estimated 20000 matches similar to: "qt with df<1"
2008 Oct 12
1
qt with df<1 (repost)
Sorry about the html-formatted message. Here it is again in plain text.
Hello,
The function qt returns NaN for degrees of freedom <1. For example:
> qt(0.5,0.5)
[1] NaN
Warning message:
In qt(p, df, lower.tail, log.p) : NaNs produced
But qt(0.5,0.5) should be 0, since the distribution is symmetric.
> pt(0,0.5)
[1] 0.5
It actually fails with any value, as long as df<1.
Is this a
2008 Dec 03
1
function qt can fails if ndf < 1 (PR#13364)
Full_Name: Gerard Torrent
Version: R version 2.8.0 (2008-10-20)
OS: Linux 2.6.27.5-41.fc9.x86_64 #1 SMP
Submission from: (NULL) (85.52.227.233)
In some cases qt complains about NaNs and don't gives the correct result:
> qt(0.1,, 0.1)
[1] NaN
Warning message:
In qt(p, df, lower.tail, log.p) : NaNs produced
But the result can be found:
> pt(-1.60443e+06, 0.1)
[1] 0.09999997
If I
2003 May 13
1
qt(p,df) discontinuous in p for df in 1.01->1.7 (PR#2991)
Full_Name: Jens Lund
Version: Version 1.7.0 (2003-04-16)
OS: Win NT 4.0 SP 6
Submission from: (NULL) (193.3.225.210)
As the T distribution is symmetrical around 0 qt(0.5,df) should return 0 for any
df.
However for df close to 1 it seems to have problems as seen by:
qt(0.5,seq(1,1.1,by=0.0001))
For example:
> qt(0.5,1.01)
[1] -0.2300470
Higher df as df=1.1 (and up to approx df=1.7) seem
2009 Jan 06
1
Warning message:In pt(q, df, lower.tail, log.p) : NaNs produced
Hi friends,
Any idea why do i get this warning?And also why all computed p-values are
NaN.
Have shown below what i did in Windows r-console.:--
> df
c1 c2
1 1 50
2 NA NA
3 4 NA
4 7 6
5 NA 7
6 10 10
> r<-cor(x=df,y=NULL,use="complete.obs",method=c("pearson"))
> r
c1 c2
c1 1.0000000 -0.9148074
c2 -0.9148074 1.0000000
> cor.p.values<-
2005 Jul 04
0
eigen of a real pd symmetric matrix gives NaNs in $vector (PR#7989)
I would presume this is another manifestation of what I reported
(reproduced below) on 2003-12-01.
cajo.terbraak at wur.nl wrote:
>Full_Name: cajo ter Braak
>Version: 2.1.1
>OS: Windows
>Submission from: (NULL) (137.224.10.105)
>
>
># I would like to attach the matrix C in the Rdata file; it is 50x50 and comes
>from a geostatistical problem (spherical covariogram)
>
2005 Jul 04
1
eigen of a real pd symmetric matrix gives NaNs in $vector (PR#7987)
Full_Name: cajo ter Braak
Version: 2.1.1
OS: Windows
Submission from: (NULL) (137.224.10.105)
# I would like to attach the matrix C in the Rdata file; it is 50x50 and comes
from a geostatistical problem (spherical covariogram)
> rm(list=ls(all=TRUE))
> load(file= "test.eigen.Rdata")
> ls()
[1] "C" "eW"
>
> sym.check = max(abs(C - t(C))) # should
2005 Dec 08
2
qt for df < 1
I was experimenting yesterday with a binomial make.link option
for estimating student t binary response models, tentatively
called gossit, and I noticed eventually that the R qt function doesn't
like df < 1. Vaguely recalling that Splus didn't seem to mind such
weirdness, I checked on our soon to be defunct Splus6.2 and
sure enough, it produced plausible answers instead of R's
2007 Nov 12
1
R - lme
Dear R gurus,
I am trying to work out the problem given in Nested design - Montgomery - Design of Experiments p.561
I have attached a pdf of the data as well the anova table. It is a mixed model with Supplier as fixed effect and batches within the supplier as random effects.
I am able to work out the error stratums as below using aov. Which agrees perfectly with the book example
2011 Jul 08
1
Confused about a warning message
I define the following function to convert a t-value with degrees of freedom
DF to another t-value with different degrees of freedom fullDF:
tConvert <- function(tval, DF, fullDF) ifelse(DF>=1, qt(pt(tval, DF),
fullDF), 0)
It works as expected with the following case:
> tConvert(c(2,3), c(10,12), 12)
[1] 1.961905 3.000000
However, it gives me warning for the example below although the
2008 Jun 14
1
qt with ncp>37.62
help(qt) states that:
"ncp non-centrality parameter delta; currently except for rt(), only for
abs(ncp) <= 37.62"
so I would expect that calling qt with non-centrality parameter exceeding
37.62 should fail, instead e.g. calling
> mapply(function(x) qt(p = 0.9, df = 55, ncp = x),35:45)
gives:
[1] 40.21448 41.35293 42.49164 43.68862 44.82945 45.97048 47.11170 48.25310
[9]
2005 May 01
2
eigen() may fail for some symmetric matrices, affects mvrnorm()
Hi all,
Recently our statistics students noticed that their Gibbs samplers were
crashing due to some NaNs in some parameters. The NaNs came from
mvrnorm (Ripley & Venables' MASS package multivariate normal sampling
function) and with some more investigation it turned out that they were
generated by function eigen, the eigenvalue computing function. The
problem did not seem to happen
2017 Apr 16
1
Getting high precision values from qnorm in the tail
Hello All
I am looking for high precision values for the normal distribution in the
tail,(1e-10 and 1 - 1e-10) as the R package that I am using sets any number
which is out of this range to these values and then calls the qnorm and qt
function.
What I have noticed is that the qnorm implementation in R is not symmetric
when looking at the tails. This is quite surprising to me, as it is well
known
2009 Oct 26
0
MLE for noncentral t distribution
Hi,
Actually I am facing a similar problem. I would like to fit both an ordinary (symmetric) and a non-central t distribution to my (one-dimensional) data (quite some values.. > 1 mio.).
For the symmetric one, fitdistr or funInfoFun (using fitdistr) from the qAnalyst package should do the job, and for the non-central one.. am I right to use
gamlss(x ~ 1, family=GT()) ?
Anyway, I am a little
2004 Jul 13
2
confint.glm in a function
I can't get confint.glm to work from within a function. Consider
the following (using R 1.9.1, Windows 2000):
# FIRST: SOMETHING THAT WORKS FROM A COMMAND PROMPT
DF <- data.frame(y=.1, N=100)
(fit <- glm(y~1, family=binomial, data=DF,
weights=DF[,"N"]))
Call: glm(formula = y ~ 1, family = binomial, data = DF, weights =
DF[, "N"])
Coefficients:
2008 Jun 09
1
Student Distribution and Funtion qt
Hello,
I am trying to calculate and plot mean and confidence intervall for a set of data. This is the code that I am currently using:
means <- sapply(data, mean, na.rm=TRUE)
n <- sapply(data,length)
stdev <- sqrt(sapply(data, var, na.rm=TRUE))
ciw <- qt(0.98, n) * stdev / sqrt(n)
par(mgp=c(2,0.6,0), las=2, fin=c(7,3), mai=c(1,0.5,0.2,0.2), cex=0.8)
plotCI(x=means, uiw=ciw,
2018 Mar 01
2
how to simplify FP ops with an undef operand?
On Thu, Mar 1, 2018 at 2:08 AM, Nuno Lopes <nunoplopes at sapo.pt> wrote:
> We can do "add %x, undef" => "undef" because for any value of %x, we can
> always find a value that when added to %x produces any value in the domain
> of integers.
>
> This is not the case with floats since with some inputs, e.g., NaNs, we
> are not able to produce some
2012 Jul 10
0
CESA-2012:0880 Moderate CentOS 6 qt Update
CentOS Errata and Security Advisory 2012:0880 Moderate
Upstream details at : https://rhn.redhat.com/errata/RHSA-2012-0880.html
The following updated files have been uploaded and are currently
syncing to the mirrors: ( sha256sum Filename )
i386:
50f94fe74c884b57a1a2101510283eeffdfd8d0af4af5b1246d61f18154919b5 phonon-backend-gstreamer-4.6.2-24.el6.i686.rpm
2012 Sep 07
0
CEBA-2012:1246 CentOS 6 qt FASTTRACK Update
CentOS Errata and Bugfix Advisory 2012:1246
Upstream details at : https://rhn.redhat.com/errata/RHBA-2012-1246.html
The following updated files have been uploaded and are currently
syncing to the mirrors: ( sha256sum Filename )
i386:
317cf57e88f211adfb49da53292ccf6b97abc89424a89db7cb04680ce8d22dfe phonon-backend-gstreamer-4.6.2-25.el6.i686.rpm
2014 Feb 24
0
CEBA-2014:0201 CentOS 6 qt Update
CentOS Errata and Bugfix Advisory 2014:0201
Upstream details at : https://rhn.redhat.com/errata/RHBA-2014-0201.html
The following updated files have been uploaded and are currently
syncing to the mirrors: ( sha256sum Filename )
i386:
727dc3b50f032ae08c8d130621aceb876cced3a08e182011d6f9c2dae1ea7c73 phonon-backend-gstreamer-4.6.2-28.el6_5.i686.rpm
2016 May 13
0
CEBA-2016:1047 CentOS 7 qt BugFix Update
CentOS Errata and Bugfix Advisory 2016:1047
Upstream details at : https://rhn.redhat.com/errata/RHBA-2016-1047.html
The following updated files have been uploaded and are currently
syncing to the mirrors: ( sha256sum Filename )
x86_64:
f63ab6aa5fdd59b19af69858bebd6828e8ecdf530873308fd9576493a633fead qt-4.8.5-12.el7_2.i686.rpm
f26bb3e7c48329d902463e8ef2803617e858ade87dfc4ce9aa949b8169fc3161