Displaying 20 results from an estimated 600 matches similar to: "help"
2014 Feb 07
2
compatable driver
Hi,
I'm trying to find, & set up a compatable driver for a
Tripp-Lite OMNI1500LCDT ups.
Not having any luck with tripplite_usb, or usbhid-ups.
Running nut 2.6.2-1 on Fedora 14. Installed from package.
Suggestions?
Dick Lawson
[root at Muleyputer ~]# upsdrvctl start
Network UPS Tools - UPS driver controller 2.6.2
Network UPS Tools - Generic HID driver 0.35 (2.6.2)
USB
2011 Dec 14
1
Limit access to a volume
Hi,
I created a volume and have to restrict access now. Just one client should be
allowed to acces the volume. So I tried:
# gluster volume set sesam auth.allow 192.168.20.1
But I can still mount the volume from other clients than 192.168.20.1. But
when I try to access the directory from an unallowd machine, my shell hangs.
If I try to unmount, it says that the device is busy. The only way
2005 Nov 10
2
[PATCH] Increase MAX_SKBUFF_ORDER
Hi,
The recent (changeset 7700) switch to use the architecture
specific skbuff allocation routine breaks with very large MTU sizes.
The below patch raises the MAX_SKBUFF_ORDER to 3. Could this be
applied to make it the default?
Thanks,
Phil
Signed-Off-by: Philip Auld <pauld@egenera.com>
diff -r 136b2d20dc81 linux-2.6-xen-sparse/arch/xen/kernel/skbuff.c
---
2004 Nov 29
2
"Linux Error: 28: No space left on device"
# uname -a
Linux sgl122 2.4.9-e.35enterprise #1 SMP Wed Jan 7 15:11:27 EST 2004 i686
unknown
# rpm -qa|grep ocfs
ocfs-2.4.9-e-enterprise-1.0.12-1
ocfs-support-1.0.10-1
ocfs-tools-1.0.10-1
Oracle 10.1.0.3 RAC on egenera blades.
"df" shows large amounts of free space (15GB, approx 50%), yet I keep getting
"Linux Error: 28: No space left on device" when doing
RMAN
2003 Jan 29
0
Ext3, orphans and read-only
Hi,
I've seen a problem where on recovery after a crash the
orphan cleanup code clears the read_only bit and does not reset
it. This causes the the fsck to drop to the "fix filesystem" prompt
simply because the root filesystem is now mounted rw.
It looks like this:
Creating rootdevice
Mounting rootfilesystem
EXT3-fs: INFO: recovery required on readonly filesystem.
EXT3-fs:
2009 Apr 07
2
heatmap.2 no reordering of the columns and rows
Hi,
I need to generate a heatmap on a square matrix and wouldn't want to reorder the columns and the rows on the heatmap display.
I have used the options Rowv=NULL and Colv=NULL but doesn't seem to work. Following is a snippet of the heatmap function i am using.
args <- commandArgs();
inputfile <- args[2]
imgfile <- args[3]
bitmap(imgfile, height=15, width=15, res=100,
2004 Jan 04
5
Analyzing dendograms??
I have used heatmap to visualize my microarray data. I have a matrix of
M-values. I do the following.
#The distance between the columns.
sampdist <- dist(t(matrix[,]), method="euclidean")
sclus <- hclust(sampdist, method="average")
#The distance between the rows.
genedist <- dist(matrix[,], method="euclidean")
gclus <- hclust(genedist,
2017 Jun 09
2
Dendogram from RNAseq read count to show correlation between biological replicate using R
Dear all,
I need to make dendogram from read count in a csv file across 34 samples
including biological replicate.
Please share R code or package to do this.
Do I also need to normalized read count before using read data?
Thanks
[[alternative HTML version deleted]]
2012 Dec 04
1
How do I get internal nodes of dendograms produced by R?
I am using R for hierarchical clustering of a number of documents.
I have a distance matrix on which I have applied hclust method. When I plot
the result of hclust method, I can see the dendogram plotted. What I need
now is the dendogram stored as a tree in a data structure. My goal is to
automatically label all internal nodes. For that, I need to know, which
leaf nodes make a first level
2005 Mar 24
2
font sizes for row.names of dendograms
Dear R
I recently performed a cluster analysis. It produced the dendogram no
problem but unfortunately the font size of the row.names were all cluttered
due to their large size
So I tried to change the font size using
plclust(cluster.results, labels=iris$specie, cex=0.8)
and R came back to me saying
Error in plclust(cluster.results, labels = iris$specie, cex = 0.8) :
unused argument(s)
2012 May 29
1
community finding in a graph and heatplot
Hi everyone,
I am using the fastgreedy.community function to get the $merges matrix and the $modularity vector. This serves my purpose of testing modularity of my graph. But I am "greedy" to plot the heat map and dendrrogram based on the $merges dendogram matrix. I know that heatplot does the graphics part but I am not sure if the dendogram generated by the heatplot will match the one
2002 Aug 27
1
2 questions about cluster analysis
Hello everyone!
I have two questions regarding cluster analysis with the package 'cluster'
:
1. I have a dissimilarity matrix in csv format, and I would like to use
it to generate a dendogram using 'hclust'. How do I make that matrix
compatible with the function? I think it has to be similar to the objects
generated by the 'dist' function. Any ideas?
2. Does
2007 May 29
2
hierarhical cluster analysis of groups of vectors
I want to do hierarchical cluster analysis to compare 10 groups of
vectors with five vectors in each group (i.e. I want to make a dendogram
showing the clustering of the different groups). I've looked into using
dist and hclust, but cannot see how to compare the different groups
instead of the individual vectors. I am thankful for any help.
Anders
2006 Jun 08
1
"reversed" dendogram
Dear All,
I am trying to find a way to plot a dendogram in reverse, that is,
if the terminal leaves are labelled 1-10 bottom to top (or left to
right), I would like to be able to plot it in a way such that if
would display 10-1 bottom to top or left to right. Any idea how to
achieve this?
Thanks in advance,
r.
Dr. Rafael Najmanovich
European Bioinformatics Institute
Wellcome Trust
2017 Jun 21
1
getting error while trying to make dendogram based on gene expression
I am trying to make dendogram based on gene expression matrix , but getting
some error:
I
countMatrix = read.table("count.row.txt",header=T,sep='\t',check.names=F)
colnames(countMatrix)
count_matrix <- countMatrix[,-1] # remove first column
(gene names)
rownames(count_matrix) <- countMatrix[,1] #added first column gene
names as rownames)
>
2011 Feb 28
1
plotting, graph, everything
I have this assignment to do and after ten hours of constant trying my eyes
ache and i give up..
all i'm able to get is this plot
please help me
these are the commands i have used till now
read.table(file.choose(), sep=";", header=T)
read.table(file.choose(), sep=";", header=T)->areas
melt(areas,id=c("Year","State"),m=c("Rice"))->
2011 Dec 22
1
large data set (matrix) using image()
When I use the image() function for a relatively small matrix it works perfectly, eg.x <- 1:100
> z <- matrix(rnorm(10^4),10^2,10^2)
> image(x=x,y=x,z=z,col=rainbow(3))but when I want to plot a larger matrix, it doesn't really work. Most of the times, it just plot a few intermitent points.x <- 1:1000
z <- matrix(rnorm(10^6),10^3,10^3)
image(x=x,y=x,z=z,col=rainbow(3))
2009 Mar 14
1
multiple hypothesis testing
Dear all,
Myself Vijaykumar Muley working as senior research fellow. By training I am
a computational biologist with not a strong knowledge of statistics. I have
done some analysis which is explained as follows,
I have 10340 (X) profiles of binary vectors with same length(N=845), I will
call then "gene profiles"
for example...
v1 v2 v3 v4.....vN
a 1 0 1 0 1
b 0
2012 Dec 06
1
tool for cluster analysis
I have Windows XP Professional Version 2002 and the R-Version 2.1.1.
I did cluster analysis with the cluster package and the agnes (method =
?ward?).
The results are satisfactory.
But the dendrogram of agnes is confused to work with the results.
Is there a tool, I can get a clear arrangement of the results for the
cluster analysis.
For example a matrix with different numbers for each group.
2005 Aug 08
0
vif-create?
I am curious if there will be corresponding vif-create / vif-destroy
commands to conicide with vbd-create and destory?
Thanks,
Pat
--
Patrick O''Rourke
porourke@egenera.com
_______________________________________________
Xen-users mailing list
Xen-users@lists.xensource.com
http://lists.xensource.com/xen-users