Displaying 20 results from an estimated 1000 matches similar to: "stepAIC {MASS}"
2005 Jun 18
1
how 'stepAIC' selects?
> -----Original Message-----
> From: r-help-bounces at stat.math.ethz.ch
> [mailto:r-help-bounces at stat.math.ethz.ch]On Behalf Of B??kony Veronika
> Sent: 18 June 2005 14:00
> To: r-help at stat.math.ethz.ch
> Subject: [R] how 'stepAIC' selects?
>
>
> Dear all,
> Could anyone please tell me how 'step' or 'stepAIC' works? Does it
>
2011 Aug 29
1
MuMIn Problem getting adjusted Confidence intervals
Hello R users
I'm using MuMIn but for some reason I'm not getting the adjusted confidence
interval and uncoditional SE whe I use model.avg().
I took into consideration the steps provided by Grueber et al (2011)
Multimodel inference in ecology and evolution: challenges and solutions in
JEB.
I created a global model to see if malaria prevalence (binomial
distribution) is related to any
2003 Mar 04
1
Sample size and stepAIC, step, or AIC
Do any R functions incorporate a sample sample size correction (e.g.,
Burnham and Anderson 1998).
Thanks,
Hank Stevens
Martin Henry H. Stevens, Assistant Professor
338 Pearson Hall
Botany Department
Miami University
Oxford, OH 45056
Office: (513) 529-4206
Lab: (513) 529-4262
FAX: (513) 529-4243
http://www.cas.muohio.edu/botany/bot/henry.html
http://www.muohio.edu/ecology
2005 Oct 29
2
LaTex error when creating DVI version when compiling package
Dear Listers,
I got this message when compiling a package:
* creating pgirmess-manual.tex ... OK
* checking pgirmess-manual.text ... ERROR
LaTex errors when creating DVI version.
This typically indicates Rd problems.
The message is quite explicit but I struggled a lot before understanding
that the trouble comes from a single file "selMod.rd" among 44 topics.
Even though I have
2003 Apr 22
7
Subject: Eliminate repeated components from a vector
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Reply-To: fjmolina at lbl.gov
FCC: /home/f/.xemacs/mail/sent
Does anyone know how I can eliminate repeated elements from a vector?
2004 Jun 01
1
multi-model inference
Hello
I've been investigating using multi-model inference, based on calculating
AIC and AIC weights, using the techniques outlined in Burnham and
Anderson's (2002) book. However I notice a couple of emails in the R-help
archive stating that there are errors in the technique. Are these errors
associated with the particular implementation that B & A propose in their
text, or is the
2007 Mar 09
4
Reg. strings and numeric data in matrix.
Hi All,
Sorry for this basic question as I am new to this R. I would like to know,
is it possible to consider a matrix with some columns having numeric data
and some other's with characters (strings) data? How do I get this type of
data from a flat file.
Thanks very much,
mallika
____________________________________________________________________________
Mallika Veeramalai, Ph.D.,
2008 Apr 20
1
Reg. consensus ranking
Dear All,
I have a list of models(1000) which have variable scores from 20 different method. I would like to rank models using consensus approach based on high scores from different methods.Is there any function available in R for this purpose? I will appreciate any pointers in this regard.
Thank you very much in Advance,
Mallika
2009 Nov 30
1
Using stepAIC to produce a p-value for when a particular variable was taken out of the model
Dear all,
I have decided after much deliberation to use backward elimination and
forward selection to produce a multivariate model. Having read about the
problems with choosing selection values I have chosen to base my decisions
of inclusion and exclusion on the AIC and am consequently using the stepAIC
function. This post however does not relate to whether or not this is the
correct decision!
2003 Jul 04
1
Quasi AIC
Dear all,
Using the quasibinomial and quasipoisson families results in no AIC being
calculated. However, a quasi AIC has actually been defined by Lebreton et al
(1992). In the (in my opinon, at least) very interesting book by Burnham and
Anderson (1998,2002) this QAIC (and also QAICc) is covered. Maybe this is something
that could be implemented in R.
Take a look at page 23 in this pdf:
2004 Mar 09
4
aic calculation
hello,
could somebody refer me to the reason R uses
-2*loglik + 2*(#param)+2
to calculate AIC?
thank you
--
Stoyan Iliev
2011 Mar 24
3
How create vector that sums correct responses for multiple subjects?
I have a data file with indicates pretest scores for a linguistics
experiment. The data are in long form so for each of 33 subjects there are
400 rows, one for each item on the test, and there is a column called
‘Correct’ that shows ‘C’ for a correct response and ‘E’ for an incorrect
response. I am trying to write a formula that will create a vector that
indicates the number of correct answers
2005 Feb 25
0
Problem using stepAIC/addterm (MASS package)
Hello,
I'm currently dealing with a rather strange problem when using the
function "stepAIC" ("MASS" package). The setting is the following: From
model learning data sets ("learndata"), I want to be able to build
prediction functions (in order to save them in a file for further use).
This is done by the function "pred.function" (see below). Therein,
2009 Feb 17
1
stopping stepAIC (MASS package)
Dear R-listers,
I am building a prediction model starting with many, many variables. I
use the 'stepAIC' procedure in the MASS package, and the model building
process takes several hours to complete. At the very end, I am
occasionally confronted with warnings like this one:
Warning messages:
1: In fitter(X, Y, strata = Strata, offset = offset, weights = weights,
:
Loglik converged
2013 Nov 27
1
Etimating time to run an analysis?
Hi everyone,
I'm new to this list and have searched R help prior for an answer to this question, without luck. If I'm posting in error, please forgive.
I'm thinking about using package MuMIn to do multimodel inference with logistic regression. I have many (25) possible predictors and am curious if there is a way to estimate how long the dredge command might take to run?
Any
2006 Feb 20
1
Nested AIC
Greetings,
I have recently come into some confusion over weather or not AIC
results for comparing among models requires that they be nested.
Reading Burnham & Anderson (2002) they are explicit that nested
models are not required, but other respected statisticians have
suggested that nesting is a pre-requisite for comparison. Could
anyone who feels strongly regarding either position
2011 Oct 04
2
About stepwise regression problem
First of all, I have GAMs
noxd<-gam(newNOX~pressure+maxtemp+s(avetemp,bs="cr")+s(mintemp,bs="cr")+s(RH,bs="cr")+s(solar,bs="cr")+s(windspeed,bs="cr")+s(transport,bs="cr"),family=gaussian
(link=log),groupD,methods=REML)
Then I type " summary(noxd)". and show
Family: gaussian
Link function: log
Formula:
newNO2 ~ pressure
2018 Feb 20
1
question regarding the AICcmodavg package
Dear moderator,
If possible I would like to send in the following question for R-help:
I am analyzing a small data set using PGLS with phylogenetic uncertainty
taken into account and thereby including 100 potential phylogenetic tree
scenarios. I've managed to run models on all of the different trees and
performed model averaging to get parameter estimates for the intercept and
most of the
2011 Jun 03
1
Outputting data from TukeyHSD
Hi All,
I am wondering if their is a convenient way to export the results of the
TukeyHSD function to Word or Excel.
I have used capture.output(tukey.contrast, file="tukey.contrast.xls")
and this works, but the data are not in a table form, and so it is sort of a
pain to manipulate the output.
I have be unable to find a more convenient way and any assistance would be
greatly
2002 Apr 01
0
something confusing about stepAIC
Folks, I'm using stepAIC(MASS) to do some automated, exploratory, model
selection for binomial and Poisson glm models in R 1.3. Because I wanted to
experiment with the small-sample correction AICc, I dug around in the code
for the functions
glm.fit
stepAIC
dropterm.glm
addterm.glm
extractAIC.glm
and came across something I just don't understand.
stepAIC() passes dropterm.glm() a