similar to: Cannot update packages on F8

Dear Sirs, I am trying to compile R v1.2.1 under Digital Unix 4.0D. The configure-script runs without any problems but during 'make' I receive the following error-message: [......] g77 -mieee -g -O2 -c dtrco.f -o dtrco.o g77 -mieee -g -O2 -c dtrsl.f -o dtrsl.o g77 -mieee -g -O2 -c eigen.f -o eigen.o g77 -mieee -g -O2 -c lminfl.f -o lminfl.o ar cr libappl.a Rsock.o approx.o bakslv.o

I am unable to compile R packages from source on Ubuntu dapper/edgy. Does anybody have an experience? When I do install.packages("nlme",depend=TRUE), I get following error messages. Can someone help? I get similar messages for any package I try to compile. VR ------------- * Installing *source* package 'nlme' ... ** libs gcc -I/usr/share/R/include -I/usr/share/R/include

Hi, I'm trying to install RMySQL and I keep hitting errors. My computer is: uname -a Linux cricket 2.6.18-92.1.22.el5PAE #1 SMP Tue Dec 16 12:36:25 EST 2008 i686 i686 i386 GNU/Linux I have set the following environment settings: export PKG_LIBS="-L/usr/lib/mysql -lmysqlclient" export PKG_CPPFLAGS="-I/usr/include/mysql" I run the following command: R CMD INSTALL

Hi all I am just about to start a project using rails and am trying to setup my enviroment with postgres as the database. I have installed postgres 8.3.1 from source and am now having trouble installing the ruby- postgres gem. The following is the output trace I am getting, looks like a problem with headers/includes, any help is greatly appreciated. Thanks Simon sudo gem install ruby-postgres

I give up. Maybe it is my search (Windows) but I cannot seem to find the definition of the F77_CALL or F77_NAME macros. Either there are too many matches or the search just doesn't find it. For example where is the source for: F77_CALL(dpotri) ? Thank you. Kevin

Hello all. I try to add Autocreate plugin patch to my FreeBSD host. I think I make all wrong. Could you tell me how to patch it? What I do: cd /usr/ports/mail/dovecot make extract cd cd work/dovecot-1.1.6/src/ fetch http://www.dovecot.org/patches/1.1/autocreate-plugin.c sh -x /tmp/patch.sh + export DOVECOT=~/usr/ports/mail/dovecot/work/dovecot-1.1.6/src + gcc -fPIC -shared -g -Wall

Hello, I am trying to install R packages under linux, some of the packages can not be installed and I got the following error, could anybody give me suggestion on where the problem is and how to fix it? Thanks-e > .libPaths() [1] "/usr/lib64/R/library" [2] "/usr/share/R/library" [3]

Dear R contributors, Considering the following sample C code, that illustrates two possible uses of a Cholesky decomp for inverting a matrix, equally valid at least in theory: SEXP test() { int d = 2; int info = 0; double mat[4] = {2.5, 0.4, 0.4, 1.7}; double id[4] = {1.0, 0.0, 0.0, 1.0}; double lmat[3]; F77_CALL(dpotrf)("L", &d, mat, &d, &info); lmat[0] = mat[0]; lmat[1]

Dear list, Tadashi Kadowaki has developed a pdf device package that allows to add hyperlinks and popups to (currently) text, mtext and rect calls. The package passes R CMD check (minor warnings) and compiles on MacOS X and GNU/Linux, but we do not succeed in building the package for Windows. The current version of the package can be checked out as svn checkout

Hello everybody, I'm trying to receive and sending faxes with asterisk using spandsp. But while compiling the spandsp0.0.2pre11 (tried also spandsp0.0.1), I get following errormessage: gcc -DHAVE_CONFIG_H -I. -I. -I. -I -g -O2 -c t4.c -Wp,-MD,.deps/t4.TPlo -fPIC -DPIC -o .libs/t4.o In file included from spandsp.h:42, from t4.c:71: spandsp/arctan2.h: In function

R Version 2.1.1 (2005-06-20); R Cocoa GUI 1.12 (1622); Mac OS X 10.4.2 (8C46) For nlme, the R package installer for CRAN (binaries) gives 3.1-60 as Repository Version as well as Installed Version. For CRAN (sources) it gives 3.1-62 as Repository Version and 3.1-60 as Installed Version. When I try to update nlme, I get * Installing *source* package 'nlme' ... ** libs gcc-3.3

Hi, I have tried both RC4 and from the repository but I can't seem to get samba4 to compile. I have rebuilt the OS (Centos 6.3) from scratch and I am still having the same issue. I get: WAF_MAKE=1 ./buildtools/bin/waf build Waf: Entering directory `/opt/samba-master/bin' Selected embedded Heimdal build [ 133/3978] Generating VERSION [ 168/3978] Generating smbd/build_options.c [1815/3978]

On 2020-07-15 14:36, Dirk Eddelbuettel wrote: > > G?ran, > > This is not an easy email to reply to because it _contains nothing > reproducible_. Thanks Dirk, Sorry about that, but my real question was (see below): "Is the problem that openblas uses C versions of blas?" That is, do I need to change F77_CALL(name)(...); to cblas_name(...); everywhere? And if so, is

dear list, I am wondering if one can find examples and/or more detailed descriptions of modifications needed when going beyond standard corStruct classes (i.e. those already provided for use in lme/nlme)? When I looked at pages 238-239 of Pinheiro/Bates (2000): Mixed-effects models in S and S-plus, I found that I would need a bit more explicit guidance what to do for implementing a new

Hi I am new to writing C code and am trying to write an R extension in C. I have hit a wall with F77_CALL(dgemm) in that it produces wrong results. The code below is a simplified example that multiplies the matrices Ab and Bm to give Cm. The results below show clearly that Cm is wrong. Am= 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 Bm= 1 1 1 1 1

>From http://bugs.r-project.org/cgi-bin/R: If you are not sure whether you have observed a bug or not, it is a good idea to ask on the mailing list R-Help by sending an e-mail to r-help at stat.math.ethz.ch rather than submitting a bug report. I'm wondering whether to submit a bug report on this: ============================================================== >

Dear R users, I fitted a repeated measure model without random effects by using lme. I will use the estimates from that model as an initial estimates to do multiple imputation for missing values of the response variable in the model. I am trying to extract the within group correlation matrix or covariance matrix. here is my code: f = lme(y ~x0+x1+trt+tim+x1:tim +tim:trt,random=~-1|subj,

In my package 'glmmML' I'm using old C code and linpack in the optimizing procedure. Specifically, one part of the code looks like this: F77_CALL(dpoco)(*hessian, &bdim, &bdim, &rcond, work, info); if (*info == 0){ F77_CALL(dpodi)(*hessian, &bdim, &bdim, det, &job); ........ This usually works OK, but with an ill-conditioned data

Hi All, i'm on a debian linux 64bit, i'm tying to install the netcdf intraface, i tried both ncdf and ncdf4 but trying to build i received the error : (i have necdf installed on my machine and it is able to fiund it .. no missed .h) epy at epinux:~$ sudo R CMD INSTALL --configure-args="-with-netcdf_incdir=/usr/include -with-netcdf_libdir=/usr/lib" ncdf4_1.8.tar.gz *

Hi, I have been using the function lme() of the package nlme to model grouped data that is auto-correlated in time and in space (the data was collected on different days via a moving monitor). I am aware that I can use the correlation classes corCAR1 and corExp (among other options) to model the temporal and spatial components of the auto-correlation. However, as far as I can tell, I can only