Displaying 20 results from an estimated 100 matches similar to: "R code for kernel density using kd-tree, looking for speed up"
2004 Aug 12
4
truly object oriented programming in R
Good morning! I recently implemented a KD tree in JAVA for faster
kernel density estimation (part of the code follows). It went well. To
hook it with R, however, has proved more difficult. My question is: is
it possible to implement the algorithm in R? My impression seems to
indicate no as the code requires a complete class-object framework that
R does not support. But is there an R package or
2010 Jun 01
1
loop
Can any one help it will be very kind, loop statements
I have this table and some more records, I want to reshape it
V1 V2 V3 V4 V5 V6 V7 V8 V9 V10
TP53 Dis1 Dis2 Dis3 Dis4 Dis5 Dis6
DCI New1 New2 New3 New4
FDI Hi2 H3 H4
GHD I1 I3 I4 I5 I6 I7 I8
I want my new table or matrix to be some thing like this
V1 V2 V3
Tp53 Dis1 Dis2
Tp53 Dis1 Dis3
Tp53 Dis1 Dis4
Tp53 Dis1 Dis5
Tp53 Dis1 Dis6
Tp53 Dis2
2004 Aug 12
9
Giving a first good impression of R to Social Scientists
Dear all,
in the coming Winter Semester, I will be a teaching assistant for a course
in Survival Analysis. My job will be to do the lab sessions. The software
used for these lab sessions will be R. Most of the students have a
background in social sciences and the only stats package they used so far is
most likely SPSS.
So I assume they might be quite surprised the first time they see R
2009 Feb 08
5
glmmBUGS: logistic regression on proportional data
Hello,
I am trying to run a logistic regression with random effects on
proportional data in glmmBUGS. I am a newcomer to this package, and
wondered if anyone could help me specify the model correctly.
I am trying to specify the response variable, /yseed/, as # of successes
out of total observations... but I suspect that given the error below,
that is not correct. Also, Newsect should be a
2002 Oct 15
1
2.2.6rc2 and authentication issues...
We just popped 2.2.6rc2 on to see if we could resolve a few printing
issues, and now I can't seem to do the printer sharing on any printers on
the server...
In [global]:
workgroup = CORP
netbios name = NEWLUCY
security = DOMAIN
encrypt passwords = Yes
update encrypted = Yes
password server = LUNA
pam password change = Yes
2011 Aug 19
1
gsub for numeric characters in string
Dear all,
I have what is a bit of a confusing question, so I hope that I can explain
clearly. Thank you for your help in advance.
I would like to do a replacement procedure on several strings, but the way
that I am currently going about it is not working.
I have defined "len", which is a series comprising the lengths of different
items, all preceded by a colon.
> len
[1]
2011 Jan 20
0
Bandwidth - Kernel Density Estimation
Dear R helpers
I am having recovery rates as given below and I am trying to estimate the Loss Given Default (LGD) and for this I am using Kernel Density estimation method.
recovery_rates = c(0.61,0.12,0.10,0.68,0.87,0.19,0.84,0.81,0.87,0.54,0.08,0.65,0.91,
0.56,0.52,0.30,0.41,0.24,0.66,0.35,0.36,0.64,0.55,0.43,0.36,0.28,0.89,0.11,0.23,0.07,
2006 May 11
3
Now another question regarding the Foreign package
Hi,
Because I'm new to R and trying to move off of SPSS, I have another question. I downloaded the "Foreign" package which I understand reads in various datasets from programs such as SPSS and SAS. There isn't much documentation that I can find regarding the specifics of this in the online docs, but I assume that it is like read.table. So, here is what I wrote and here is
2011 Feb 13
1
RCytoscape setPosition error
Hi
Can some one please point out where i am wrong.
I am trying to position set of nodes column-wise in cytoscape using
RCytoscape
A----D
B----E
C----F
-------------------
g <- new ('graphNEL', edgemode='undirected')
cw <- CytoscapeWindow ('smallExample', graph=RCytoscape::makeSimpleGraph())
layout (cw, 'jgraph-spring')
redraw(cw)
nodesFr = c('A',
2020 Jul 01
2
How to prevent llvm's default optimization
Thanks. I have checked the hook DAGCombiner::isMulAddWithConstProfitable
And I think the above condition is too aggressive.
// If the add only has one use, this would be OK to do.
if (AddNode.getNode()->hasOneUse())
return true;
Shall we make it to
if (AddNode.getNode()->hasOneUse() && TargetLowering.isCheaperCommuteAddMul(......))
return true;
The virtual hook
2007 Jul 16
0
FW: summary statistics for groups
Kirsten,
this may not be the most elegant approach, but I think I would create
dummy variables on the fly for each disease code you have, then use the
"with" function to get means.
Give this a try:
# setup some fake data as an example
icd9 <- c(rep("dis1",4), rep("dis2",5), rep("dis3",3))
n <- length(icd9)
exposure <- rnorm(n)
working <-
2007 Oct 28
0
TreeView Control
I am just learning RubyRails.....
I am simply trying to add a tree view control. I want to use the YUI
treeview control.
Here is my code
<% for tax in @taxonomies%>
<%=tax.parent-%> <%=tax.description-%> <br>
<script type="text/javascript">
addNode(node_id,description)
</script>
<% end %>
I have a javascript that
2007 May 23
0
Samba priting problem, might be windows printer defintion
Hi Sunmanagers
I still have a problem with my samba printing mechanism.
When I log on some windows machines it will not print. I have found out
that when I print from some machines while the print queu is stopped
then the jobs are saved there as root. When I print from other machines
they are saved as my name.
I can print from dos by using echo something > \\server\printer.
I can print with
2011 Nov 14
2
[LLVMdev] Build LLVM as a DLL on Windows x86
On 11/13/2011 8:57 PM, NAKAMURA Takumi wrote:
> AFAIK, on msys, trunk and release_30 is almost fine.
> http://bb.pgr.jp/builders/clang-i686-msys Though, here is no builder
> on win32 with --enable-shared.
I'm having a problem now, building Release Candidate 3 on msys
(using msysGit environment, which I find the easiest to set up and keep
isolated);
with --enable-optimized
2011 Jun 03
1
Traversing KD-tree (or equivalent) for radius-based search
Hi,
I'm trying to implement the DBSCAN algorithm to get O(N*LogN) complexity
and I'd need a spatial tree of some sort (kd,r,bd..), or a function that
computes radius-based search on spatial data, i.e. given a radius eps
finds ALL the points which fall in the corresponding hypersphere
centered on the current examined point. Is there a package with this
features?
So far I found RANN
2016 Feb 10
5
Question about an error we're now starting to get on LLVM 3.8.0rc2since
+llvm-dev
> On 2016-Feb-09, at 12:54, Harris, Kevin <Kevin.Harris at unisys.com> wrote:
>
> Duncan,
> Kevin Harris here, from Unisys. In our application, generating LLVM IR, we have several instances of code that looks like this:
>
> . . .
> Value* pDS;
> . . .
> auto argIt = pFunc->arg_begin();
>
2010 Oct 05
1
binary tree construction in R
Hi all,
I'm very new to R and I'm trying to construct a threaded binary tree using
recursive functions.
I'm very confused was wondering if anyone had any R sample code they would
share. I've come across a lot of C++ code(nothing in R) and this is not
helping.
best,
MK
--
View this message in context:
2011 Apr 29
4
You don't check for malloc failure
Hi,
You don't check for malloc failure. I've made a patch that is possibly
wrong but it saves the program from SIGSEGV and replaces it with SIGABRT.
-peter
diff -ru icecast-2.3.2-ORIG/src/admin.c icecast-2.3.2/src/admin.c
--- icecast-2.3.2-ORIG/src/admin.c Fri May 2 17:40:00 2008
+++ icecast-2.3.2/src/admin.c Thu Apr 28 19:53:03 2011
@@ -291,6 +291,9 @@
2011 Mar 26
1
bwplot [lattice]: how to get different y-axis scales for each row?
Dear expeRts,
How can I get ...
(1) different y-axis scales for each row
(2) while having the same y-axis scales for different columns?
I coulnd't manage to do this with relation="free" [which gives (1) but not (2)].
I also tried relation="sliced", but it did not give the same y-axis scales
within each row (see the fourth row). Further, it "separates" the
2012 Nov 19
2
[PATCH 158/493] video: remove use of __devinit
CONFIG_HOTPLUG is going away as an option so __devinit is no longer
needed.
Signed-off-by: Bill Pemberton <wfp5p at virginia.edu>
Cc: Florian Tobias Schandinat <FlorianSchandinat at gmx.de>
Cc: Jaya Kumar <jayalk at intworks.biz>
Cc: Paul Mackerras <paulus at samba.org>
Cc: Benjamin Herrenschmidt <benh at kernel.crashing.org>
Cc: Russell King <linux at