similar to: How to search for packages

Hi, I hope someone knows the answer to this or has a real good reference about it (I am using Legendre & Legendre, Numerical Ecology, 1998).... My data is a data.frame with locations as rows and vegetation assemblages / species as columns. I've done a PCA, a correspondance analysis (CA) using ca in ca package and a detrended correspondance analysis (DCA) using decorana from vegan package.

Hi everyone, I have a vector of strings, each string made up by different number of words. I want to get a new vector which has only the first word of each string in the first vector. I came up with this: str <- c('aaa bbb', 'cc', 'd eee aa', 'mmm o n') str1 <- rep(1, length(str)) for (i in 1:length(str)) { str1[i] <- strsplit(str, "

Hi, I am using an if else statement inside a function ?. If I use that function I have no problems ?. If I use the function with the if else statement inside a second function I get the following waring: Warning message: In if (pval == 0) p_value <- "< 2.2e-16" else p_value <- pval : the condition has length> 1 and only the first element will be used Using the second

Hi everyone, ? I am trying to get a point of intersection between a polyline and a straight line ?.. and get the x and y coordinates of this point. For exemplification consider this: ? ? set.seed(123) ? k1 <-rnorm(100, mean=1.77, sd=3.33) ?k1 <- sort(k1) q1 <- rnorm(100, mean=2.37, sd=0.74) q1 <- sort(q1, decreasing = TRUE) plot(k1, q1, xlim <- c((min(k1)-5),

Hi everybody, I have a vector of characters and i would like to extract certain parts. My vector is named metr_list: [1] "F:/Naval_Live_Oaks/2005/data//BE.tif" [2] "F:/Naval_Live_Oaks/2005/data//CH.tif" [3] "F:/Naval_Live_Oaks/2005/data//CRR.tif" [4] "F:/Naval_Live_Oaks/2005/data//HOME.tif" And i would like to extract BE, CH, CRR, and HOME in a

Hi everybody, I have a vector of characters and i would like to extract certain parts. My vector is named metr_list: [1] "F:/Naval_Live_Oaks/2005/data//BE.tif" [2] "F:/Naval_Live_Oaks/2005/data//CH.tif" [3] "F:/Naval_Live_Oaks/2005/data//CRR.tif" [4] "F:/Naval_Live_Oaks/2005/data//HOME.tif" And i would like to extract BE, CH, CRR, and HOME in a

Hi, I am having some difficulties with matrix operations. It is a little hard to explain it so please bear with me. I have a very large data set, large enough that it needs to be split in parts in order to deal with. I can work things on these "parts" but the problem lies in adding together these parts for the final answer. So that been said, let's say that i split the data in 2

Hi, I am doing a very informal presentation for my office about R capabilities to deal with and analyze spatial data, display data and maps, and connections with GIS. I've used in my presentation info from the CRAN, the spatial Task view, and the more striking graphics examples from http://addictedtor.free.fr/graphiques/thumbs.php and NCEAS

Hi, I am getting some strange results using round - it seems that it depends if the number before the decimal point is odd or even .... For example: > round(1.5)[1] 2> round(2.5)[1] 2 While i would expect that round(2.5) be 3 and not 2. Do you have any explanation for that? I really appreciate your input, Monica

Hi, I am trying to get percentages in a more elegant way. I have a data.frame with locations and values (counts) of species at that location. Each location is repeated for each species i have values for and i would like to get percentages of each species at that location. I am not sure if i am clear in my explanations so i will paste my code below: ##################### > x locat val 1

Hi R listers, I am trying to group distances of nests to the vegetation into classes that are define by (0-5m, 6-10m, 11-15m, 16-20m, 21-25m, 26-30m, 31-35m, 36-40m, 41-45m, 46-50m, 51-55m, 56-60m). Each row is a nest and all the distances to the vegetation is in a column. In plyr, I have tried - below script but I think I am going about this the wrong way and am not successful. #Veg index

Hi, I have a set of irregular time series and i want to produce a simple plot, with dates on x axis and attribute value of y axis. This is simple enough but my x axis is divided automatically by ticks every 5 years. I would like to have a tick every year at January 1st. I am not sure how i can do that - i end up with something very close to what i want, but it is clunky and not very correct. I

Hi, I am sure there is a reason but ...... why larger decimal numbers get rounded to the nearest integer? Example: a <- 3308000.5 a [1] 3308001 I would like my numbers to be decimals .... since they do represent coordinates and i don't want them rounded .... how can i keep them as they are? Thanks, Monica _________________________________________________________________

Hi, I would like to find out the coordinates of the intersection points of 2 density curves. I did a search but i didn't get any significant results. I really hope some of you have some ideas. here it is an example: set.seed(123) x1 <- rnorm(100, 1, 1) x2 <- rnorm(100, 0, 1) d1 <- density(x1) d2 <- density(x2) plot(d1, col = 2) lines(d2, col = 4) Now i would like to know

Hello all, I am going slightly mad trying to create a table for running co-correspondence analysis. What I have is seed bank and vegetation data, and my aim is to see if the vegetation found in a site (containing several seed bank samples) can predict the composition of a seed bank sample within that site. So for this I need two tables with matching rows. I have created an empty matrix,

Hello list, I am wondering if a joining "one-to-many" can be done a little bit easier. I tried merge function but I was not able to do it, so I end up using for and if. Suppose you have a table with locations, each location repeated several times, and some attributes at that location. The second table has the same locations, but only once with a different set of attributes. I would

Hi, I would like to use the function "extract" from package raster and i get the following error: m01e <- extract(marsh01, p) Error: could not find function "extract" marsh01 is a raster object and p is an intersectExtent object that is not null. The package is installed and loaded, i use a Windows machine 64 bit and R x64 2.11.0. Do i really need to update my R to use

Hi, I have a graph and I would like to write some values inside the legend that were saved in a variable. Please revise the code below in which I've wrote 2 different legends, but I am not happy with either of them. What I want is a legend with tile "Legend" and underneath a line with a name and a value like that: value = 2. #Code begin: # ------------------- a = 2 # result of a

Hi list, I have a question about 'plot'. I am trying to plot values registered every month - or every other month. If i build a data.frame called mydata like this (as an example) jan 3 1 7 mar 2 4 2 may 1 3 2 jul 3 7 4 sep 5 2 3 nov 3 1 5 and use the command line: plot(mydata[c(1,3)]) I get a graph that has on the x axis my months in alphabetical

Hi, I have to recognize that i don't fully understand the aggregate function, but i think it should help me with what i want to do. xveg is a data.frame with location, species, and total for the species. Each location is repeated, once for every species present at that location. For each location i want to find out which species has the maximum total ... so i've tried different ways to