similar to: Accessing the elements of a list

Dear All, I recently got a 64bit machine and had netcdf-3.6.2 installed. Then I tried to install ncdf package but got the following error message when using netcdflib: gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include -I/home/ljin/share/R-2.6.1/include -I. -I/usr/local/include -fpic -g -O2 -c ncdf2.c -o ncdf2.o gcc -std=gnu99 -I/home/ljin/share/R-2.6.1/include

I am very new to R. I have some data from a CVS stored in vdata with 4 columns labeled: X08, Y08, X09, Y09. I have created two new "columns" like so: Z08 <- (vdata$X08-vdata$Y08) Z09 <- (vdata$X09-vdata$Y09) I would like to use chisq.test for each "row" and output the p-value for each in a stored variable. I don't know how to do it. Can you help? so far I have

Hello All I am having a bit of trouble formatting my HTML with the desired number of digits after the decimal place. Am I doing something wrong/misunderstanding or is it a bug? Looking at the example supplied with ?HTML.data.frame: HTML(iris[1:2,1:2],nsmall=c(3,1),file="") Gives html output that includes the lines: </tr> <tr><td

using an example from r online help > state <- c("tas", "sa", "qld", "nsw", "nsw", "nt", "wa", "wa", "qld", "vic", "nsw", "vic", "qld", "qld", "sa", "tas", "sa", "nt", "wa", "vic",

Hi R guru coders I wrote a bit of code to add a new column onto a "topTable" dataframe. That is a list of genes processed using the limma package. I used a for loop but I kept feeling there was a better way using a more vector oriented approach. I looked at several commands such as "apply", "by" etc but could not find a good way to do it. I have this feeling there

Matt attempted to add CLOCK_TAI support to the VDSO clock_gettime() implementation, which extended the clockid switch case and added yet another slightly different copy of the same code. Especially the extended switch case is problematic as the compiler tends to generate a jump table which then requires to use retpolines. If jump tables are disabled it adds yet another conditional to the existing

I seem to have a problem getting latex (Hmisc) to work. Any suggestions as to what I am doing wrong? Thanks library(Hmisc) aa <- data.frame(aa=1:10, bb=rnorm(10, 5, 2), cc=rnorm(10, 20, 4)) rr <- lm(cc~aa+bb, data=aa); rr latex(rr) > latex(rr) 'latex' is not recognized as an internal or external command, operable program or batch file. Warning messages: 1: In cbind(cx, cxk) :

Dear R community, I am using R version 2.4.1 GUI 1.18 on an iBook G4 with OS 10.4.10. When I try to load package 'gplots' I get the following message: > library(gplots) Loading required package: gdata Attaching package: 'gdata' The following object(s) are masked _by_ .GlobalEnv : reorder.factor Loading required package: gtools Attaching package: 'gtools'

Full_Name: Jarno Tuimala Version: 2.3.1 OS: Solaris / Linux Submission from: (NULL) (193.166.2.98) Today I downloaded the latest source code release R-2.3.1.tar.gz, and it seems not to contain the VR bundle. After running ./configure I get the following error message: checking for recommended packages... ./src/library/Recommended/VR_*.tar.gz: No such file or directory no configure: error: Some

Dear All, It is not a typical R question (though I use R for this) but I thought someone will help me. For the list of P values, I have calculated FDR using p.adjust() in R (bioconductor). But my FDR values are same for all the P values. When do we get same FDR values? Does the smallest P values should less than 1/N? (where N is the number of P values) Thanks in advance. Kind regards, Ezhil

I'd been hoping to move all of our site to ssh protocol 2 whilst we are still small enough to do this without serious pain, however the lack of authentication and connection forwarding is making that difficult at present. I see the current (2.2.0p1) code base does not have the code on either client or server side for ssh2 to handle tunneled connections or authentication agent. Is this

Hello All I cannot close R easily: > > q() Error in .Last() : could not find function "finalizeSession" > This seems to have started after I used the R.utils package. If I load the R.utils package I can close R successfully. But I do not want to have to do this every time I run R. Is there any way I can switch off /reverse this behaviour? (I have had a look in the

Matt attempted to add CLOCK_TAI support to the VDSO clock_gettime() implementation, which extended the clockid switch case and added yet another slightly different copy of the same code. Especially the extended switch case is problematic as the compiler tends to generate a jump table which then requires to use retpolines. If jump tables are disabled it adds yet another conditional to the existing

Matt attempted to add CLOCK_TAI support to the VDSO clock_gettime() implementation, which extended the clockid switch case and added yet another slightly different copy of the same code. Especially the extended switch case is problematic as the compiler tends to generate a jump table which then requires to use retpolines. If jump tables are disabled it adds yet another conditional to the existing

There's a new page on the Burns Statistics website http://www.burns-stat.com/pages/Tutor/spreadsheet_addiction.html that looks at spreadsheets from a quality assurance perspective. It presents R as a suitable alternative to spreadsheets. Also there are several specific problems with Excel that are highlighted, including the status of statistical functionality in Excel. Patrick Burns Burns

Hi Paolo & Co, So I've been running into another bug with SeaBIOS w/ virtio-scsi + vhost-scsi-pci code.. During the last weeks debugging on the QEMU vhost memory re-mapping bug, my seabios builds have been using a smaller target ID (16) for scanning than the default hard coded value of 256 in init_virtio_scsi(). After bumping this value back to 256 recently, a bogus out_num value from

Hi Paolo & Co, So I've been running into another bug with SeaBIOS w/ virtio-scsi + vhost-scsi-pci code.. During the last weeks debugging on the QEMU vhost memory re-mapping bug, my seabios builds have been using a smaller target ID (16) for scanning than the default hard coded value of 256 in init_virtio_scsi(). After bumping this value back to 256 recently, a bogus out_num value from

Dear friend, I am trying to use R in Excel, I installed R-(D)COM (RSrv250_pl1)., and the rcom package (rcom_1.5-2.2). But when I try to start R in Excel, I got an strange error "error in C:\Program Files\R\R-2.5.1\etc\RConsole line 69". The line 69 is "language=". I modified it to "language=en" and that didn't help. Has anyone seen this, and what should I do??

Hi, I would like to apply the following function for i between 1 and 12, and then construct a list of the return series. for (i in 1:12){ ewma[i] <- emaTA(calm[[i]]^2,0.03) standard[i]<- calm[[i]]/sqrt(ewma[i]) standard <- cbind(standard[i]) } But it does not work. Could anyone give me some advice how can I achieve this? Many thanks -- View this message in context:

Long ago, when I wrote the ssh config file on my desktop box, ssh (which might have been the non-openssh one) took 3 possible values for the StrictHostKeyChecking option - yes, no & ask. Today, when I attempted to connect to a new machine, with no DNS entries (so using IP address) from my desktop box, ssh (now 2.3.0p1) SEGVed. Looks like there is some subtle interaction between having an